Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2026-input.r176-smll-177961111800041.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2026-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5973
Executing tool gold2025
Input is HypertorusGrid-PT-d5k3p2b10, examination is ReachabilityDeadlock
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r176-smll-177961111800041
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 14M
-rw-r--r-- 1 mcc users 9.2K Mar 7 17:25 CTLCardinality.txt
-rw-r--r-- 1 mcc users 78K Mar 7 17:25 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.5K Mar 7 17:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 41K Mar 7 17:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Mar 3 18:30 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.3K Mar 15 10:59 LTLCardinality.txt
-rw-r--r-- 1 mcc users 23K Mar 15 10:59 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.4K Mar 15 10:59 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K Mar 15 10:59 LTLFireability.xml
-rw-r--r-- 1 mcc users 11K Mar 7 17:31 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 81K Mar 7 17:31 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 14K Mar 7 17:30 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 77K Mar 7 17:30 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.0K Mar 15 10:59 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K Mar 15 10:59 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 3 18:30 equiv_col
-rw-r--r-- 1 mcc users 10 Mar 3 18:30 instance
-rw-r--r-- 1 mcc users 6 Mar 3 18:30 iscolored
-rwxr-xr-x 1 mcc users 14M Mar 3 18:30 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME ReachabilityDeadlock

=== Now, execution of the tool begins

BK_START 1779748920930

Invoking MCC driver with
GOLD_TOOL=
BK_EXAMINATION=ReachabilityDeadlock
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=HypertorusGrid-PT-d5k3p2b10
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
ReachabilityDeadlock PT
Running Version 202505121319
[2026-05-25 22:42:03] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2026-05-25 22:42:03] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2026-05-25 22:42:04] [INFO ] Load time of PNML (sax parser for PT used): 1195 ms
[2026-05-25 22:42:04] [INFO ] Transformed 7533 places.
[2026-05-25 22:42:04] [INFO ] Transformed 24300 transitions.
[2026-05-25 22:42:04] [INFO ] Parsed PT model containing 7533 places and 24300 transitions and 97200 arcs in 1575 ms.
Parsed 1 properties from file /home/mcc/execution/ReachabilityDeadlock.xml in 7 ms.
Working with output stream class java.io.PrintStream
Built sparse matrix representations for Structural reductions in 56 ms.67034KB memory used
Starting structural reductions in DEADLOCK mode, iteration 0 : 7533/7533 places, 24300/24300 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 3071 ms. Remains 7533 /7533 variables (removed 0) and now considering 24300/24300 (removed 0) transitions.
Finished structural reductions in DEADLOCK mode , in 1 iterations and 3102 ms. Remains : 7533/7533 places, 24300/24300 transitions.
Starting structural reductions in DEADLOCK mode, iteration 0 : 7533/7533 places, 24300/24300 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 2091 ms. Remains 7533 /7533 variables (removed 0) and now considering 24300/24300 (removed 0) transitions.
// Phase 1: matrix 24300 rows 7533 cols
[2026-05-25 22:42:11] [INFO ] Computed 2674 invariants in 1280 ms
Starting Z3 with timeout 160.0 s and query timeout 16000.0 ms
[2026-05-25 22:42:30] [INFO ] Implicit Places using invariants in 19912 ms returned []
Implicit Place search using SMT only with invariants took 19971 ms to find 0 implicit places.
Running 21870 sub problems to find dead transitions.
[2026-05-25 22:42:30] [INFO ] Invariant cache hit.
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
Error getting values : (error "ParserException while parsing response: (timeout
org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 2673/31833 variables, and 0 constraints, problems are : Problem set: 0 solved, 21870 unsolved in 30487 ms.
Refiners :[Positive P Invariants (semi-flows): 0/2673 constraints, Generalized P Invariants (flows): 0/1 constraints, State Equation: 0/7533 constraints, PredecessorRefiner: 21870/21870 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 21870 unsolved
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
Error getting values : (error "ParserException while parsing response: ((s2430 1)
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(s3208 1)
(s3209 1)
(s3210 1)
(s3211 1)
(s3212 1)
(s3213 1)
(s3214 1)
(s3215 1)
(s3216 1)
(s3217 1)
(s3218 1)
(s3219 1)
(s3220 1)
(s3221 1)
(s3222 1)
(s3223 1)
(s3224 1)
(s3225 1)
(s3226 1)
(s3227 1)
(s3228 1)
(s3229 1)
(s3230 1)
(s3231 1)
(s3232 1)
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(s3252 1)
(s3253 1)
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(s3256 1)
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(s3260 1)
(s3261 1)
(s3262 1)
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(s3303 1)
(s3304 1)
(s3305 1)
(s3306 1)
(s3307 1)
(s3308 1)
(s3309 1)
(s3310 1)
(s3311 1)
(s3312 1)
(s3313 1)
(s3314 1)
(s3315 1)
(s3316 1)
(s3317 1)
(s3318 1)
(s3319 1)
(s3320 1)
(s3321 1)
(s3322 1)
(s3323 1)
(s3324 1)
(s3325 1)
(s3326 1)
(s3327 1)
(s3328 1)
(s3329 1)
(s3330 1)
(s3331 1)
(s3332 1)
(s3333 1)
(s3334 1)
(s3335 1)
(s3336 1)
(s3337 1)
(s3338 1)
(s3339 1)
(s3340 1)
(s3341 1)
(s3342 1)
(s3343 1)
(s3344 1)
(s3345 1)
(s3346 timeout
org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 2673/31833 variables, and 0 constraints, problems are : Problem set: 0 solved, 21870 unsolved in 30569 ms.
Refiners :[Positive P Invariants (semi-flows): 0/2673 constraints, Generalized P Invariants (flows): 0/1 constraints, State Equation: 0/7533 constraints, PredecessorRefiner: 0/21870 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
After SMT, in 125321ms problems are : Problem set: 0 solved, 21870 unsolved
Search for dead transitions found 0 dead transitions in 125488ms
Finished structural reductions in DEADLOCK mode , in 1 iterations and 147666 ms. Remains : 7533/7533 places, 24300/24300 transitions.
Interrupted Random walk after 37710 steps, including 0 resets, run timeout after 30001 ms. (steps per millisecond=1 )
[2026-05-25 22:45:05] [INFO ] Invariant cache hit.
Starting Z3 with timeout 300.0 s and query timeout 30000.0 ms
[2026-05-25 22:46:33] [INFO ] [Real]Absence check using 2673 positive place invariants in 82945 ms returned unknown
Interrupted Random directed walk after 66082 steps, including 0 resets, run timeout after 30660 ms. (steps per millisecond=2 )
Interrupted Random walk after 38953 steps, including 0 resets, run timeout after 30001 ms. (steps per millisecond=1 )
Interrupted Random directed walk after 68339 steps, including 0 resets, run timeout after 30818 ms. (steps per millisecond=2 )
Interrupted Random walk after 38545 steps, including 0 resets, run timeout after 30001 ms. (steps per millisecond=1 )
Starting structural reductions in DEADLOCK mode, iteration 0 : 7533/7533 places, 24300/24300 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 1967 ms. Remains 7533 /7533 variables (removed 0) and now considering 24300/24300 (removed 0) transitions.
[2026-05-25 22:48:36] [INFO ] Invariant cache hit.
Starting Z3 with timeout 160.0 s and query timeout 16000.0 ms
[2026-05-25 22:48:55] [INFO ] Implicit Places using invariants in 18164 ms returned []
Implicit Place search using SMT only with invariants took 18165 ms to find 0 implicit places.
Running 21870 sub problems to find dead transitions.
[2026-05-25 22:48:55] [INFO ] Invariant cache hit.
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
Error getting values : (error "ParserException while parsing response: ((s2430 1.0)
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(s5914 1.0)
(s5915 1.0)
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(s6166 1.0)timeout

org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 2673/31833 variables, and 0 constraints, problems are : Problem set: 0 solved, 21870 unsolved in 30534 ms.
Refiners :[Positive P Invariants (semi-flows): 0/2673 constraints, Generalized P Invariants (flows): 0/1 constraints, State Equation: 0/7533 constraints, PredecessorRefiner: 21870/21870 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 21870 unsolved
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
Error getting values : (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 2673/31833 variables, and 0 constraints, problems are : Problem set: 0 solved, 21870 unsolved in 30502 ms.
Refiners :[Positive P Invariants (semi-flows): 0/2673 constraints, Generalized P Invariants (flows): 0/1 constraints, State Equation: 0/7533 constraints, PredecessorRefiner: 0/21870 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
After SMT, in 118936ms problems are : Problem set: 0 solved, 21870 unsolved
Search for dead transitions found 0 dead transitions in 118989ms
Finished structural reductions in DEADLOCK mode , in 1 iterations and 139168 ms. Remains : 7533/7533 places, 24300/24300 transitions.
Interrupted Random walk after 38765 steps, including 0 resets, run timeout after 30001 ms. (steps per millisecond=1 )
[2026-05-25 22:51:24] [INFO ] Invariant cache hit.
Starting Z3 with timeout 300.0 s and query timeout 30000.0 ms
[2026-05-25 22:52:46] [INFO ] [Real]Absence check using 2673 positive place invariants in 77930 ms returned sat
[2026-05-25 22:53:16] [INFO ] SMT solver returned unknown. Retrying;
[2026-05-25 22:53:46] [INFO ] [Real]Absence check using 2673 positive and 1 generalized place invariants in 60020 ms returned unknown
Interrupted Random directed walk after 66798 steps, including 0 resets, run timeout after 31118 ms. (steps per millisecond=2 )
Interrupted Random walk after 38479 steps, including 0 resets, run timeout after 30001 ms. (steps per millisecond=1 )
Interrupted Random directed walk after 68414 steps, including 0 resets, run timeout after 31101 ms. (steps per millisecond=2 )
Interrupted Random walk after 38173 steps, including 0 resets, run timeout after 30001 ms. (steps per millisecond=1 )
[2026-05-25 22:55:50] [INFO ] Flatten gal took : 1447 ms
Using solver Z3 to compute partial order matrices.
Built C files in :
/tmp/ltsmin15764636564991492147
[2026-05-25 22:55:51] [INFO ] Too many transitions (24300) to apply POR reductions. Disabling POR matrices.
[2026-05-25 22:55:52] [INFO ] Built C files in 407ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin15764636564991492147
Running compilation step : cd /tmp/ltsmin15764636564991492147;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202505121319/bin/limit_time.pl' '360' 'gcc' '-c' '-I/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202505121319/bin/include/' '-I.' '-std=c99' '-fPIC' '-O0' 'model.c'
[2026-05-25 22:55:52] [INFO ] Applying decomposition
[2026-05-25 22:55:53] [INFO ] Flatten gal took : 947 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/convert-linux64' '-i' '/tmp/graph4419306394751280836.txt' '-o' '/tmp/graph4419306394751280836.bin' '-w' '/tmp/graph4419306394751280836.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/louvain-linux64' '/tmp/graph4419306394751280836.bin' '-l' '-1' '-v' '-w' '/tmp/graph4419306394751280836.weights' '-q' '0' '-e' '0.001'
[2026-05-25 22:55:55] [INFO ] Decomposing Gal with order
[2026-05-25 22:55:56] [INFO ] Rewriting arrays to variables to allow decomposition.
[2026-05-25 22:56:10] [INFO ] Removed a total of 38880 redundant transitions.
[2026-05-25 22:56:11] [INFO ] Flatten gal took : 2104 ms
[2026-05-25 22:56:11] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 188 ms.
[2026-05-25 22:56:11] [INFO ] Time to serialize gal into /tmp/ReachabilityDeadlock881924772962459619.gal : 266 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-ctl-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityDeadlock881924772962459619.gal' '-t' 'CGAL' '-ctl' 'DEADLOCK'

its-ctl command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -...233
No direction supplied, using forward translation only.

BK_STOP 1779750110557

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityDeadlock = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202505121319.jar
+ VERSION=202505121319
+ echo 'Running Version 202505121319'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="HypertorusGrid-PT-d5k3p2b10"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="gold2025"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5973"
echo " Executing tool gold2025"
echo " Input is HypertorusGrid-PT-d5k3p2b10, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r176-smll-177961111800041"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/HypertorusGrid-PT-d5k3p2b10.tgz
mv HypertorusGrid-PT-d5k3p2b10 execution
cd execution
if [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "UpperBounds" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] || [ "ReachabilityDeadlock" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityDeadlock"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;