Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/data/fkordon/mcc2025-input.r226-smll-174903490700088.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2025-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5832
Executing tool itstools
Input is StigmergyCommit-PT-07a, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r226-smll-174903490700088
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 5.8M
-rw-r--r-- 1 mcc users 6.2K May 29 14:47 CTLCardinality.txt
-rw-r--r-- 1 mcc users 65K May 29 14:47 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.4K May 29 14:47 CTLFireability.txt
-rw-r--r-- 1 mcc users 48K May 29 14:47 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.8K May 29 14:47 LTLCardinality.txt
-rw-r--r-- 1 mcc users 28K May 29 14:47 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 29 14:47 LTLFireability.txt
-rw-r--r-- 1 mcc users 21K May 29 14:47 LTLFireability.xml
-rw-r--r-- 1 mcc users 9.5K May 29 14:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 97K May 29 14:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.8K May 29 14:47 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 72K May 29 14:47 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 29 14:47 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 29 14:47 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 29 14:33 equiv_col
-rw-r--r-- 1 mcc users 4 May 29 14:33 instance
-rw-r--r-- 1 mcc users 6 May 29 14:33 iscolored
-rw-r--r-- 1 mcc users 5.4M May 29 14:33 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1749082952909

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=StigmergyCommit-PT-07a
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202505121319
[2025-06-05 00:22:35] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2025-06-05 00:22:35] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2025-06-05 00:22:36] [INFO ] Load time of PNML (sax parser for PT used): 952 ms
[2025-06-05 00:22:36] [INFO ] Transformed 292 places.
[2025-06-05 00:22:36] [INFO ] Transformed 7108 transitions.
[2025-06-05 00:22:36] [INFO ] Found NUPN structural information;
[2025-06-05 00:22:36] [INFO ] Parsed PT model containing 292 places and 7108 transitions and 108222 arcs in 1253 ms.
Ensure Unique test removed 6092 transitions
Reduce redundant transitions removed 6243 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 292/292 places, 865/865 transitions.
Drop transitions (Redundant composition of simpler transitions.) removed 16 transitions
Redundant transition composition rules discarded 16 transitions
Starting Z3 with timeout 200.0 s and query timeout 20000.0 ms
[2025-06-05 00:22:37] [INFO ] Redundant transitions in 120 ms returned []
Running 848 sub problems to find dead transitions.
// Phase 1: matrix 849 rows 292 cols
[2025-06-05 00:22:37] [INFO ] Computed 9 invariants in 52 ms
[2025-06-05 00:22:37] [INFO ] State equation strengthened by 620 read => feed constraints.
Excessive predecessor constraint size, skipping predecessor.
Excessive predecessor constraint size, skipping predecessor.
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Excessive predecessor constraint size, skipping predecessor.
Excessive predecessor constraint size, skipping predecessor.
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Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/283 variables, 283/283 constraints. Problems are: Problem set: 0 solved, 848 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/283 variables, 0/283 constraints. Problems are: Problem set: 0 solved, 848 unsolved
At refinement iteration 2 (OVERLAPS) 9/292 variables, 9/292 constraints. Problems are: Problem set: 0 solved, 848 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/292 variables, 9/301 constraints. Problems are: Problem set: 0 solved, 848 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 292/1141 variables, and 301 constraints, problems are : Problem set: 0 solved, 848 unsolved in 30087 ms.
Refiners :[Domain max(s): 292/292 constraints, Positive P Invariants (semi-flows): 9/9 constraints, State Equation: 0/292 constraints, ReadFeed: 0/620 constraints, PredecessorRefiner: 848/330 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 848 unsolved
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/283 variables, 283/283 constraints. Problems are: Problem set: 0 solved, 848 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/283 variables, 0/283 constraints. Problems are: Problem set: 0 solved, 848 unsolved
At refinement iteration 2 (OVERLAPS) 9/292 variables, 9/292 constraints. Problems are: Problem set: 0 solved, 848 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/292 variables, 9/301 constraints. Problems are: Problem set: 0 solved, 848 unsolved
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:27] [INFO ] Deduced a trap composed of 16 places in 600 ms of which 131 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:28] [INFO ] Deduced a trap composed of 16 places in 706 ms of which 84 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:28] [INFO ] Deduced a trap composed of 16 places in 656 ms of which 77 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:29] [INFO ] Deduced a trap composed of 16 places in 595 ms of which 67 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:30] [INFO ] Deduced a trap composed of 16 places in 602 ms of which 64 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:30] [INFO ] Deduced a trap composed of 16 places in 398 ms of which 39 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:30] [INFO ] Deduced a trap composed of 16 places in 373 ms of which 27 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:31] [INFO ] Deduced a trap composed of 16 places in 343 ms of which 21 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:31] [INFO ] Deduced a trap composed of 16 places in 269 ms of which 20 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:31] [INFO ] Deduced a trap composed of 16 places in 384 ms of which 23 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:32] [INFO ] Deduced a trap composed of 16 places in 383 ms of which 24 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:32] [INFO ] Deduced a trap composed of 18 places in 364 ms of which 19 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:32] [INFO ] Deduced a trap composed of 16 places in 240 ms of which 18 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:33] [INFO ] Deduced a trap composed of 16 places in 298 ms of which 21 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:33] [INFO ] Deduced a trap composed of 16 places in 262 ms of which 14 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:33] [INFO ] Deduced a trap composed of 16 places in 258 ms of which 14 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:34] [INFO ] Deduced a trap composed of 16 places in 314 ms of which 15 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:34] [INFO ] Deduced a trap composed of 16 places in 343 ms of which 20 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:34] [INFO ] Deduced a trap composed of 16 places in 254 ms of which 15 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:34] [INFO ] Deduced a trap composed of 16 places in 175 ms of which 11 ms to minimize.
At refinement iteration 4 (INCLUDED_ONLY) 0/292 variables, 20/321 constraints. Problems are: Problem set: 0 solved, 848 unsolved
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:36] [INFO ] Deduced a trap composed of 16 places in 152 ms of which 12 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:37] [INFO ] Deduced a trap composed of 16 places in 149 ms of which 10 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:37] [INFO ] Deduced a trap composed of 16 places in 137 ms of which 7 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:37] [INFO ] Deduced a trap composed of 16 places in 208 ms of which 14 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:37] [INFO ] Deduced a trap composed of 16 places in 272 ms of which 20 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:37] [INFO ] Deduced a trap composed of 16 places in 207 ms of which 12 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:38] [INFO ] Deduced a trap composed of 16 places in 145 ms of which 8 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:38] [INFO ] Deduced a trap composed of 16 places in 259 ms of which 17 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:38] [INFO ] Deduced a trap composed of 18 places in 277 ms of which 14 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:38] [INFO ] Deduced a trap composed of 18 places in 211 ms of which 11 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:39] [INFO ] Deduced a trap composed of 18 places in 160 ms of which 6 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:39] [INFO ] Deduced a trap composed of 16 places in 138 ms of which 7 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:39] [INFO ] Deduced a trap composed of 16 places in 187 ms of which 15 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:39] [INFO ] Deduced a trap composed of 16 places in 140 ms of which 7 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:39] [INFO ] Deduced a trap composed of 18 places in 126 ms of which 4 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:40] [INFO ] Deduced a trap composed of 16 places in 321 ms of which 23 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-05 00:23:40] [INFO ] Deduced a trap composed of 16 places in 254 ms of which 18 ms to minimize.
SMT process timed out in 62585ms, After SMT, problems are : Problem set: 0 solved, 848 unsolved
Search for dead transitions found 0 dead transitions in 62673ms
Starting structural reductions in STATESPACE mode, iteration 1 : 292/292 places, 849/865 transitions.
Finished structural reductions in STATESPACE mode , in 1 iterations and 63422 ms. Remains : 292/292 places, 849/865 transitions.
Final net has 292 places and 849 transitions.
[2025-06-05 00:23:41] [INFO ] Flatten gal took : 294 ms
[2025-06-05 00:23:41] [INFO ] Applying decomposition
[2025-06-05 00:23:41] [INFO ] Flatten gal took : 99 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/convert-linux64' '-i' '/tmp/graph4857079470359086903.txt' '-o' '/tmp/graph4857079470359086903.bin' '-w' '/tmp/graph4857079470359086903.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/louvain-linux64' '/tmp/graph4857079470359086903.bin' '-l' '-1' '-v' '-w' '/tmp/graph4857079470359086903.weights' '-q' '0' '-e' '0.001'
[2025-06-05 00:23:41] [INFO ] Decomposing Gal with order
[2025-06-05 00:23:41] [INFO ] Rewriting arrays to variables to allow decomposition.
[2025-06-05 00:23:42] [INFO ] Removed a total of 4238 redundant transitions.
[2025-06-05 00:23:42] [INFO ] Flatten gal took : 464 ms
[2025-06-05 00:23:42] [INFO ] Fuse similar labels procedure discarded/fused a total of 88 labels/synchronizations in 115 ms.
[2025-06-05 00:23:42] [INFO ] Time to serialize gal into /tmp/StateSpace4248015808875999983.gal : 25 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace4248015808875999983.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst\_mod\_flat,7.86822e+06,108.12,2120756,9731,95,325401,1059,1297,2.74122e+07,88,5267,0
Total reachable state count : 7868223

Max variable value : 1
STATE_SPACE MAX_TOKEN_IN_PLACE 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Maximum sum along a path : 9
STATE_SPACE MAX_TOKEN_PER_MARKING 9 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Exact state count : 7868223
STATE_SPACE STATES 7868223 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Total runtime 175698 ms.

BK_STOP 1749083131203

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202505121319.jar
+ VERSION=202505121319
+ echo 'Running Version 202505121319'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="StigmergyCommit-PT-07a"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5832"
echo " Executing tool itstools"
echo " Input is StigmergyCommit-PT-07a, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r226-smll-174903490700088"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/StigmergyCommit-PT-07a.tgz
mv StigmergyCommit-PT-07a execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;