Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/data/fkordon/mcc2025-input.r226-smll-174903490600072.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2025-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5832
Executing tool itstools
Input is StigmergyCommit-PT-06a, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r226-smll-174903490600072
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 2.2M
-rw-r--r-- 1 mcc users 7.8K May 29 14:47 CTLCardinality.txt
-rw-r--r-- 1 mcc users 87K May 29 14:47 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.9K May 29 14:47 CTLFireability.txt
-rw-r--r-- 1 mcc users 54K May 29 14:47 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K May 29 14:47 LTLCardinality.txt
-rw-r--r-- 1 mcc users 29K May 29 14:47 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 29 14:47 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 29 14:47 LTLFireability.xml
-rw-r--r-- 1 mcc users 5.3K May 29 14:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 42K May 29 14:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.8K May 29 14:47 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 73K May 29 14:47 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 29 14:47 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 29 14:47 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 29 14:33 equiv_col
-rw-r--r-- 1 mcc users 4 May 29 14:33 instance
-rw-r--r-- 1 mcc users 6 May 29 14:33 iscolored
-rw-r--r-- 1 mcc users 1.8M May 29 14:33 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1749072549004

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=StigmergyCommit-PT-06a
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202505121319
[2025-06-04 21:29:11] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2025-06-04 21:29:11] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2025-06-04 21:29:12] [INFO ] Load time of PNML (sax parser for PT used): 635 ms
[2025-06-04 21:29:12] [INFO ] Transformed 256 places.
[2025-06-04 21:29:12] [INFO ] Transformed 2816 transitions.
[2025-06-04 21:29:12] [INFO ] Found NUPN structural information;
[2025-06-04 21:29:12] [INFO ] Parsed PT model containing 256 places and 2816 transitions and 35321 arcs in 994 ms.
Ensure Unique test removed 2147 transitions
Reduce redundant transitions removed 2251 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 256/256 places, 565/565 transitions.
Drop transitions (Redundant composition of simpler transitions.) removed 14 transitions
Redundant transition composition rules discarded 14 transitions
Starting Z3 with timeout 200.0 s and query timeout 20000.0 ms
[2025-06-04 21:29:12] [INFO ] Redundant transitions in 41 ms returned []
Running 550 sub problems to find dead transitions.
// Phase 1: matrix 551 rows 256 cols
[2025-06-04 21:29:13] [INFO ] Computed 8 invariants in 22 ms
[2025-06-04 21:29:13] [INFO ] State equation strengthened by 350 read => feed constraints.
Excessive predecessor constraint size, skipping predecessor.
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/248 variables, 248/248 constraints. Problems are: Problem set: 0 solved, 550 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/248 variables, 0/248 constraints. Problems are: Problem set: 0 solved, 550 unsolved
At refinement iteration 2 (OVERLAPS) 8/256 variables, 8/256 constraints. Problems are: Problem set: 0 solved, 550 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/256 variables, 8/264 constraints. Problems are: Problem set: 0 solved, 550 unsolved
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:32] [INFO ] Deduced a trap composed of 16 places in 559 ms of which 70 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:33] [INFO ] Deduced a trap composed of 16 places in 386 ms of which 45 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:33] [INFO ] Deduced a trap composed of 16 places in 465 ms of which 45 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:34] [INFO ] Deduced a trap composed of 16 places in 373 ms of which 52 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:34] [INFO ] Deduced a trap composed of 16 places in 408 ms of which 43 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:35] [INFO ] Deduced a trap composed of 16 places in 400 ms of which 39 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:35] [INFO ] Deduced a trap composed of 16 places in 355 ms of which 36 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:35] [INFO ] Deduced a trap composed of 16 places in 464 ms of which 33 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:36] [INFO ] Deduced a trap composed of 18 places in 381 ms of which 33 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:36] [INFO ] Deduced a trap composed of 16 places in 321 ms of which 27 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:36] [INFO ] Deduced a trap composed of 18 places in 310 ms of which 21 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:37] [INFO ] Deduced a trap composed of 16 places in 321 ms of which 27 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:37] [INFO ] Deduced a trap composed of 18 places in 237 ms of which 18 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:37] [INFO ] Deduced a trap composed of 16 places in 244 ms of which 22 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:37] [INFO ] Deduced a trap composed of 16 places in 194 ms of which 15 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:38] [INFO ] Deduced a trap composed of 16 places in 242 ms of which 23 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:38] [INFO ] Deduced a trap composed of 16 places in 244 ms of which 24 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:38] [INFO ] Deduced a trap composed of 16 places in 195 ms of which 18 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:38] [INFO ] Deduced a trap composed of 16 places in 165 ms of which 14 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:38] [INFO ] Deduced a trap composed of 16 places in 109 ms of which 6 ms to minimize.
At refinement iteration 4 (INCLUDED_ONLY) 0/256 variables, 20/284 constraints. Problems are: Problem set: 0 solved, 550 unsolved
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:40] [INFO ] Deduced a trap composed of 16 places in 149 ms of which 11 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:40] [INFO ] Deduced a trap composed of 18 places in 103 ms of which 5 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:40] [INFO ] Deduced a trap composed of 16 places in 213 ms of which 20 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:40] [INFO ] Deduced a trap composed of 16 places in 259 ms of which 21 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:40] [INFO ] Deduced a trap composed of 16 places in 168 ms of which 13 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:41] [INFO ] Deduced a trap composed of 16 places in 189 ms of which 12 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:41] [INFO ] Deduced a trap composed of 18 places in 152 ms of which 9 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:41] [INFO ] Deduced a trap composed of 16 places in 185 ms of which 14 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:41] [INFO ] Deduced a trap composed of 16 places in 239 ms of which 21 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:42] [INFO ] Deduced a trap composed of 16 places in 201 ms of which 17 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:42] [INFO ] Deduced a trap composed of 16 places in 200 ms of which 19 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:42] [INFO ] Deduced a trap composed of 16 places in 224 ms of which 20 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:42] [INFO ] Deduced a trap composed of 16 places in 221 ms of which 19 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:42] [INFO ] Deduced a trap composed of 16 places in 161 ms of which 15 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:43] [INFO ] Deduced a trap composed of 16 places in 151 ms of which 13 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:43] [INFO ] Deduced a trap composed of 16 places in 156 ms of which 11 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:43] [INFO ] Deduced a trap composed of 16 places in 110 ms of which 6 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:43] [INFO ] Deduced a trap composed of 16 places in 193 ms of which 15 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:43] [INFO ] Deduced a trap composed of 16 places in 198 ms of which 17 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 21:29:44] [INFO ] Deduced a trap composed of 16 places in 199 ms of which 17 ms to minimize.
SMT process timed out in 31049ms, After SMT, problems are : Problem set: 0 solved, 550 unsolved
Search for dead transitions found 0 dead transitions in 31090ms
Starting structural reductions in STATESPACE mode, iteration 1 : 256/256 places, 551/565 transitions.
Finished structural reductions in STATESPACE mode , in 1 iterations and 31372 ms. Remains : 256/256 places, 551/565 transitions.
Final net has 256 places and 551 transitions.
[2025-06-04 21:29:44] [INFO ] Flatten gal took : 200 ms
[2025-06-04 21:29:44] [INFO ] Applying decomposition
[2025-06-04 21:29:44] [INFO ] Flatten gal took : 101 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/convert-linux64' '-i' '/tmp/graph619740974972727179.txt' '-o' '/tmp/graph619740974972727179.bin' '-w' '/tmp/graph619740974972727179.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/louvain-linux64' '/tmp/graph619740974972727179.bin' '-l' '-1' '-v' '-w' '/tmp/graph619740974972727179.weights' '-q' '0' '-e' '0.001'
[2025-06-04 21:29:45] [INFO ] Decomposing Gal with order
[2025-06-04 21:29:45] [INFO ] Rewriting arrays to variables to allow decomposition.
[2025-06-04 21:29:45] [INFO ] Removed a total of 1913 redundant transitions.
[2025-06-04 21:29:45] [INFO ] Flatten gal took : 227 ms
[2025-06-04 21:29:45] [INFO ] Fuse similar labels procedure discarded/fused a total of 76 labels/synchronizations in 106 ms.
[2025-06-04 21:29:45] [INFO ] Time to serialize gal into /tmp/StateSpace15034327723759221449.gal : 24 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace15034327723759221449.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...220
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst\_mod\_flat,1.1535e+06,3.76118,101704,2791,96,82332,1045,931,956658,94,4287,0
Total reachable state count : 1153503

Max variable value : 1
STATE_SPACE MAX_TOKEN_IN_PLACE 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Maximum sum along a path : 8
STATE_SPACE MAX_TOKEN_PER_MARKING 8 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Exact state count : 1153503
STATE_SPACE STATES 1153503 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Total runtime 37995 ms.

BK_STOP 1749072589615

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202505121319.jar
+ VERSION=202505121319
+ echo 'Running Version 202505121319'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="StigmergyCommit-PT-06a"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5832"
echo " Executing tool itstools"
echo " Input is StigmergyCommit-PT-06a, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r226-smll-174903490600072"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/StigmergyCommit-PT-06a.tgz
mv StigmergyCommit-PT-06a execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;