Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/data/fkordon/mcc2025-input.r226-smll-174903490500008.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2025-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5832
Executing tool itstools
Input is StigmergyCommit-PT-02a, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r226-smll-174903490500008
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 512K
-rw-r--r-- 1 mcc users 9.0K May 29 14:47 CTLCardinality.txt
-rw-r--r-- 1 mcc users 104K May 29 14:47 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.1K May 29 14:47 CTLFireability.txt
-rw-r--r-- 1 mcc users 59K May 29 14:47 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.8K May 29 14:47 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K May 29 14:47 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 29 14:47 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 29 14:47 LTLFireability.xml
-rw-r--r-- 1 mcc users 12K May 29 14:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 128K May 29 14:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 6.4K May 29 14:47 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 51K May 29 14:47 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 29 14:47 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 29 14:47 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 29 14:33 equiv_col
-rw-r--r-- 1 mcc users 4 May 29 14:33 instance
-rw-r--r-- 1 mcc users 6 May 29 14:33 iscolored
-rw-r--r-- 1 mcc users 50K May 29 14:33 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1749049283788

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=StigmergyCommit-PT-02a
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202505121319
[2025-06-04 15:01:26] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2025-06-04 15:01:26] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2025-06-04 15:01:26] [INFO ] Load time of PNML (sax parser for PT used): 151 ms
[2025-06-04 15:01:26] [INFO ] Transformed 112 places.
[2025-06-04 15:01:26] [INFO ] Transformed 204 transitions.
[2025-06-04 15:01:26] [INFO ] Found NUPN structural information;
[2025-06-04 15:01:26] [INFO ] Parsed PT model containing 112 places and 204 transitions and 693 arcs in 372 ms.
Ensure Unique test removed 29 transitions
Reduce redundant transitions removed 55 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 112/112 places, 149/149 transitions.
Drop transitions (Redundant composition of simpler transitions.) removed 6 transitions
Redundant transition composition rules discarded 6 transitions
Starting Z3 with timeout 200.0 s and query timeout 20000.0 ms
[2025-06-04 15:01:26] [INFO ] Redundant transitions in 8 ms returned []
Running 142 sub problems to find dead transitions.
// Phase 1: matrix 143 rows 112 cols
[2025-06-04 15:01:26] [INFO ] Computed 4 invariants in 16 ms
[2025-06-04 15:01:27] [INFO ] State equation strengthened by 54 read => feed constraints.
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/108 variables, 108/108 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/108 variables, 0/108 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 2 (OVERLAPS) 4/112 variables, 4/112 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/112 variables, 4/116 constraints. Problems are: Problem set: 0 solved, 142 unsolved
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:31] [INFO ] Deduced a trap composed of 16 places in 215 ms of which 29 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:31] [INFO ] Deduced a trap composed of 16 places in 109 ms of which 7 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:31] [INFO ] Deduced a trap composed of 18 places in 118 ms of which 7 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:31] [INFO ] Deduced a trap composed of 16 places in 120 ms of which 8 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:31] [INFO ] Deduced a trap composed of 16 places in 138 ms of which 11 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:31] [INFO ] Deduced a trap composed of 16 places in 120 ms of which 12 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:31] [INFO ] Deduced a trap composed of 16 places in 83 ms of which 7 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:31] [INFO ] Deduced a trap composed of 16 places in 83 ms of which 8 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:32] [INFO ] Deduced a trap composed of 18 places in 141 ms of which 10 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:32] [INFO ] Deduced a trap composed of 18 places in 81 ms of which 5 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:32] [INFO ] Deduced a trap composed of 16 places in 76 ms of which 5 ms to minimize.
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:32] [INFO ] Deduced a trap composed of 16 places in 68 ms of which 5 ms to minimize.
At refinement iteration 4 (INCLUDED_ONLY) 0/112 variables, 12/128 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/112 variables, 0/128 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 6 (OVERLAPS) 143/255 variables, 112/240 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 7 (INCLUDED_ONLY) 0/255 variables, 54/294 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 8 (INCLUDED_ONLY) 0/255 variables, 0/294 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 9 (OVERLAPS) 0/255 variables, 0/294 constraints. Problems are: Problem set: 0 solved, 142 unsolved
No progress, stopping.
After SMT solving in domain Real declared 255/255 variables, and 294 constraints, problems are : Problem set: 0 solved, 142 unsolved in 17269 ms.
Refiners :[Domain max(s): 112/112 constraints, Positive P Invariants (semi-flows): 4/4 constraints, State Equation: 112/112 constraints, ReadFeed: 54/54 constraints, PredecessorRefiner: 142/142 constraints, Known Traps: 12/12 constraints, Known Traps Along Path: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 142 unsolved
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/108 variables, 108/108 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/108 variables, 0/108 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 2 (OVERLAPS) 4/112 variables, 4/112 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/112 variables, 4/116 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/112 variables, 12/128 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/112 variables, 0/128 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 6 (OVERLAPS) 143/255 variables, 112/240 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 7 (INCLUDED_ONLY) 0/255 variables, 54/294 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 8 (INCLUDED_ONLY) 0/255 variables, 142/436 constraints. Problems are: Problem set: 0 solved, 142 unsolved
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
[2025-06-04 15:01:50] [INFO ] Deduced a trap along path composed of 9 places in 109 ms of which 8 ms to minimize.
At refinement iteration 9 (INCLUDED_ONLY) 0/255 variables, 1/437 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 10 (INCLUDED_ONLY) 0/255 variables, 0/437 constraints. Problems are: Problem set: 0 solved, 142 unsolved
At refinement iteration 11 (OVERLAPS) 0/255 variables, 0/437 constraints. Problems are: Problem set: 0 solved, 142 unsolved
No progress, stopping.
After SMT solving in domain Int declared 255/255 variables, and 437 constraints, problems are : Problem set: 0 solved, 142 unsolved in 23454 ms.
Refiners :[Domain max(s): 112/112 constraints, Positive P Invariants (semi-flows): 4/4 constraints, State Equation: 112/112 constraints, ReadFeed: 54/54 constraints, PredecessorRefiner: 142/142 constraints, Known Traps: 12/12 constraints, Known Traps Along Path: 1/1 constraints]
After SMT, in 40958ms problems are : Problem set: 0 solved, 142 unsolved
Search for dead transitions found 0 dead transitions in 40986ms
Starting structural reductions in STATESPACE mode, iteration 1 : 112/112 places, 143/149 transitions.
Finished structural reductions in STATESPACE mode , in 1 iterations and 41319 ms. Remains : 112/112 places, 143/149 transitions.
Final net has 112 places and 143 transitions.
[2025-06-04 15:02:08] [INFO ] Flatten gal took : 79 ms
[2025-06-04 15:02:08] [INFO ] Applying decomposition
[2025-06-04 15:02:08] [INFO ] Flatten gal took : 24 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/convert-linux64' '-i' '/tmp/graph13902940942824061906.txt' '-o' '/tmp/graph13902940942824061906.bin' '-w' '/tmp/graph13902940942824061906.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/louvain-linux64' '/tmp/graph13902940942824061906.bin' '-l' '-1' '-v' '-w' '/tmp/graph13902940942824061906.weights' '-q' '0' '-e' '0.001'
[2025-06-04 15:02:08] [INFO ] Decomposing Gal with order
[2025-06-04 15:02:08] [INFO ] Rewriting arrays to variables to allow decomposition.
[2025-06-04 15:02:08] [INFO ] Removed a total of 85 redundant transitions.
[2025-06-04 15:02:08] [INFO ] Flatten gal took : 109 ms
[2025-06-04 15:02:08] [INFO ] Fuse similar labels procedure discarded/fused a total of 17 labels/synchronizations in 20 ms.
[2025-06-04 15:02:08] [INFO ] Time to serialize gal into /tmp/StateSpace8603766695357410767.gal : 15 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace8603766695357410767.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst\_mod\_flat,695,0.097082,4916,165,69,1840,596,362,2633,77,1349,0
Total reachable state count : 695

Max variable value : 1
STATE_SPACE MAX_TOKEN_IN_PLACE 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Maximum sum along a path : 4
STATE_SPACE MAX_TOKEN_PER_MARKING 4 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Exact state count : 695
STATE_SPACE STATES 695 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Total runtime 42807 ms.

BK_STOP 1749049329022

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202505121319.jar
+ VERSION=202505121319
+ echo 'Running Version 202505121319'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="StigmergyCommit-PT-02a"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5832"
echo " Executing tool itstools"
echo " Input is StigmergyCommit-PT-02a, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r226-smll-174903490500008"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/StigmergyCommit-PT-02a.tgz
mv StigmergyCommit-PT-02a execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;