Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/data/fkordon/mcc2025-input.r086-smll-174860101900104.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2025-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5832
Executing tool itstools
Input is FamilyReunion-COL-L00010M0001C001P001G001, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r086-smll-174860101900104
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 724K
-rw-r--r-- 1 mcc users 6.0K May 29 14:47 CTLCardinality.txt
-rw-r--r-- 1 mcc users 56K May 29 14:47 CTLCardinality.xml
-rw-r--r-- 1 mcc users 8.3K May 29 14:47 CTLFireability.txt
-rw-r--r-- 1 mcc users 61K May 29 14:47 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 29 14:32 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.1K May 29 14:47 LTLCardinality.txt
-rw-r--r-- 1 mcc users 29K May 29 14:47 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.3K May 29 14:47 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 29 14:47 LTLFireability.xml
-rw-r--r-- 1 mcc users 17K May 29 14:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 185K May 29 14:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 18K May 29 14:47 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 125K May 29 14:47 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.0K May 29 14:47 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K May 29 14:47 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 29 14:32 equiv_pt
-rw-r--r-- 1 mcc users 24 May 29 14:32 instance
-rw-r--r-- 1 mcc users 5 May 29 14:32 iscolored
-rw-r--r-- 1 mcc users 134K May 29 14:32 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1748668406727

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=FamilyReunion-COL-L00010M0001C001P001G001
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is COL
StateSpace COL
Running Version 202505121319
[2025-05-31 05:13:29] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2025-05-31 05:13:29] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2025-05-31 05:13:29] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[2025-05-31 05:13:30] [WARNING] Using fallBack plugin, rng conformance not checked
[2025-05-31 05:13:31] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 1524 ms
[2025-05-31 05:13:31] [INFO ] Detected 5 constant HL places corresponding to 10 PT places.
[2025-05-31 05:13:31] [INFO ] Imported 104 HL places and 66 HL transitions for a total of 1486 PT places and 1245.0 transition bindings in 69 ms.
[2025-05-31 05:13:31] [INFO ] Unfolded HLPN to a Petri net with 1486 places and 1234 transitions 3535 arcs in 85 ms.
[2025-05-31 05:13:31] [INFO ] Unfolded 0 HLPN properties in 0 ms.
Deduced a syphon composed of 11 places in 47 ms
Reduce places removed 21 places and 0 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 1465/1465 places, 1234/1234 transitions.
Starting Z3 with timeout 200.0 s and query timeout 20000.0 ms
[2025-05-31 05:13:32] [INFO ] Redundant transitions in 133 ms returned []
Running 1223 sub problems to find dead transitions.
// Phase 1: matrix 1234 rows 1465 cols
[2025-05-31 05:13:32] [INFO ] Computed 332 invariants in 256 ms
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
Error getting values : (error "ParserException while parsing response: (timeout
org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
At refinement iteration 0 (INCLUDED_ONLY) 0/1409 variables, 273/273 constraints. Problems are: Problem set: 0 solved, 1223 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 1409/2699 variables, and 273 constraints, problems are : Problem set: 0 solved, 1223 unsolved in 30117 ms.
Refiners :[Positive P Invariants (semi-flows): 0/26 constraints, Generalized P Invariants (flows): 273/306 constraints, State Equation: 0/1465 constraints, PredecessorRefiner: 1223/1223 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 1223 unsolved
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/1409 variables, 273/273 constraints. Problems are: Problem set: 0 solved, 1223 unsolved
Error getting values : (error "ParserException while parsing response: ((s0 1)
(s1 1)
(s2 1)
(s3 1)
(s4 1)
(s5 1)
(s6 1)
(s7 1)
(s8 1)
(s9 1)
(s10 1)
(s11 1)
(s12 1)
(s13 1)
(s14 1)
(s15 1)
(s16 1)
(s17 1)
(s18 1)
(s19 1)
(s20 1)
(s21 1)
(s33 1)
(s34 1)
(s35 1)
(s36 1)
(s37 1)
(s38 1)
(s39 1)
(s40 1)
(s41 1)
(s42 1)
(s43 1)
(s44 1)
(s45 1)
(s46 1)
(s47 1)
(s48 1)
(s49 1)
(s50 1)
(s51 1)
(s52 1)
(s53 1)
(s54 1)
(s55 1)
(s56 1)
(s57 1)
(s58 1)
(s59 1)
(s60 1)
(s61 1)
(s62 1)
(s63 1)
(s64 1)
(s65 1)
(s66 5)
(s67 1)
(s68 5)
(s69 5)
(s70 5)
(s71 5)
(s72 5)
(s73 5)
(s74 5)
(s75 5)
(s76 5)
(s77 1)
(s78 1)
(s79 1)
(s80 1)
(s81 1)
(s82 1)
(s83 1)
(s84 1)
(s85 1)
(s86 1)
(s87 1)
(s88 1)
(s89 1)
(s90 1)
(s91 1)
(s92 1)
(s93 1)
(s94 1)
(s95 1)
(s96 1)
(s97 1)
(s98 1)
(s99 1)
(s100 1)
(s101 1)
(s102 1)
(s103 1)
(s104 1)
(s105 1)
(s106 1)
(s107 1)
(s108 1)
(s109 timeout
1 org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 1409/2699 variables, and 273 constraints, problems are : Problem set: 0 solved, 1223 unsolved in 30035 ms.
Refiners :[Positive P Invariants (semi-flows): 0/26 constraints, Generalized P Invariants (flows): 273/306 constraints, State Equation: 0/1465 constraints, PredecessorRefiner: 0/1223 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
After SMT, in 61226ms problems are : Problem set: 0 solved, 1223 unsolved
Search for dead transitions found 0 dead transitions in 61314ms
Finished structural reductions in STATESPACE mode , in 1 iterations and 61834 ms. Remains : 1465/1465 places, 1234/1234 transitions.
Final net has 1465 places and 1234 transitions.
[2025-05-31 05:14:33] [INFO ] Flatten gal took : 206 ms
[2025-05-31 05:14:33] [INFO ] Applying decomposition
[2025-05-31 05:14:34] [INFO ] Flatten gal took : 119 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/convert-linux64' '-i' '/tmp/graph10562531405522214687.txt' '-o' '/tmp/graph10562531405522214687.bin' '-w' '/tmp/graph10562531405522214687.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/louvain-linux64' '/tmp/graph10562531405522214687.bin' '-l' '-1' '-v' '-w' '/tmp/graph10562531405522214687.weights' '-q' '0' '-e' '0.001'
[2025-05-31 05:14:34] [INFO ] Decomposing Gal with order
[2025-05-31 05:14:34] [INFO ] Rewriting arrays to variables to allow decomposition.
[2025-05-31 05:14:34] [INFO ] Removed a total of 377 redundant transitions.
[2025-05-31 05:14:34] [INFO ] Flatten gal took : 225 ms
[2025-05-31 05:14:35] [INFO ] Fuse similar labels procedure discarded/fused a total of 10 labels/synchronizations in 36 ms.
[2025-05-31 05:14:35] [INFO ] Time to serialize gal into /tmp/StateSpace11672748247569482185.gal : 58 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace11672748247569482185.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...220
Detected timeout of ITS tools.
[2025-05-31 05:34:56] [INFO ] Applying decomposition
[2025-05-31 05:34:56] [INFO ] Flatten gal took : 59 ms
[2025-05-31 05:34:56] [INFO ] Decomposing Gal with order
[2025-05-31 05:34:56] [INFO ] Rewriting arrays to variables to allow decomposition.
[2025-05-31 05:34:56] [INFO ] Removed a total of 577 redundant transitions.
[2025-05-31 05:34:56] [INFO ] Flatten gal took : 136 ms
[2025-05-31 05:34:56] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 4 ms.
[2025-05-31 05:34:56] [INFO ] Time to serialize gal into /tmp/StateSpace1251559830090158888.gal : 20 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace1251559830090158888.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Detected timeout of ITS tools.
[2025-05-31 05:55:21] [INFO ] Flatten gal took : 1363 ms
[2025-05-31 05:55:25] [INFO ] Input system was already deterministic with 1234 transitions.
[2025-05-31 05:55:25] [INFO ] Transformed 1465 places.
[2025-05-31 05:55:25] [INFO ] Transformed 1234 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2025-05-31 05:55:56] [INFO ] Time to serialize gal into /tmp/StateSpace13224120443728122582.gal : 28 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace13224120443728122582.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...286
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202505121319.jar
++ sed s/.jar//
+ VERSION=202505121319
+ echo 'Running Version 202505121319'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="FamilyReunion-COL-L00010M0001C001P001G001"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5832"
echo " Executing tool itstools"
echo " Input is FamilyReunion-COL-L00010M0001C001P001G001, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r086-smll-174860101900104"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/FamilyReunion-COL-L00010M0001C001P001G001.tgz
mv FamilyReunion-COL-L00010M0001C001P001G001 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;