Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/data/fkordon/mcc2025-input.r058-smll-174854064400568.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2025-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5832
Executing tool itstools
Input is Diffusion2D-PT-D40N100, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r058-smll-174854064400568
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 5.2M
-rw-r--r-- 1 mcc users 8.9K May 29 14:47 CTLCardinality.txt
-rw-r--r-- 1 mcc users 84K May 29 14:47 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.5K May 29 14:47 CTLFireability.txt
-rw-r--r-- 1 mcc users 47K May 29 14:47 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 29 14:32 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.5K May 29 14:47 LTLCardinality.txt
-rw-r--r-- 1 mcc users 28K May 29 14:47 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K May 29 14:47 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 29 14:47 LTLFireability.xml
-rw-r--r-- 1 mcc users 17K May 29 14:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 156K May 29 14:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 11K May 29 14:47 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 73K May 29 14:47 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 29 14:47 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 29 14:47 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 29 14:32 equiv_col
-rw-r--r-- 1 mcc users 8 May 29 14:32 instance
-rw-r--r-- 1 mcc users 6 May 29 14:32 iscolored
-rw-r--r-- 1 mcc users 4.7M May 29 14:32 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1748876449878

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Diffusion2D-PT-D40N100
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202505121319
[2025-06-02 15:00:52] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2025-06-02 15:00:52] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2025-06-02 15:00:53] [INFO ] Load time of PNML (sax parser for PT used): 877 ms
[2025-06-02 15:00:53] [INFO ] Transformed 1600 places.
[2025-06-02 15:00:53] [INFO ] Transformed 12324 transitions.
[2025-06-02 15:00:53] [INFO ] Parsed PT model containing 1600 places and 12324 transitions and 24648 arcs in 1119 ms.
Starting structural reductions in STATESPACE mode, iteration 0 : 1600/1600 places, 12324/12324 transitions.
Drop transitions (Redundant composition of simpler transitions.) removed 7644 transitions
Redundant transition composition rules discarded 7644 transitions
Starting Z3 with timeout 200.0 s and query timeout 20000.0 ms
[2025-06-02 15:00:54] [INFO ] Redundant transitions in 754 ms returned []
Running 4677 sub problems to find dead transitions.
// Phase 1: matrix 4680 rows 1600 cols
[2025-06-02 15:00:54] [INFO ] Computed 1 invariants in 118 ms
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
Error getting values : (error "ParserException while parsing response: ((s0 1.0)
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(s1467 timeout
org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 1599/6280 variables, and 0 constraints, problems are : Problem set: 0 solved, 4677 unsolved in 30273 ms.
Refiners :[Positive P Invariants (semi-flows): 0/1 constraints, State Equation: 0/1600 constraints, PredecessorRefiner: 4677/4677 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 4677 unsolved
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
Error getting values : (error "ParserException while parsing response: (timeout
org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 1599/6280 variables, and 0 constraints, problems are : Problem set: 0 solved, 4677 unsolved in 30137 ms.
Refiners :[Positive P Invariants (semi-flows): 0/1 constraints, State Equation: 0/1600 constraints, PredecessorRefiner: 0/4677 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
After SMT, in 63326ms problems are : Problem set: 0 solved, 4677 unsolved
Search for dead transitions found 0 dead transitions in 63398ms
Starting structural reductions in STATESPACE mode, iteration 1 : 1600/1600 places, 4680/12324 transitions.
Finished structural reductions in STATESPACE mode , in 1 iterations and 64533 ms. Remains : 1600/1600 places, 4680/12324 transitions.
Final net has 1600 places and 4680 transitions.
[2025-06-02 15:01:59] [INFO ] Flatten gal took : 789 ms
[2025-06-02 15:01:59] [INFO ] Applying decomposition
[2025-06-02 15:01:59] [INFO ] Flatten gal took : 228 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/convert-linux64' '-i' '/tmp/graph17960700732982130174.txt' '-o' '/tmp/graph17960700732982130174.bin' '-w' '/tmp/graph17960700732982130174.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/louvain-linux64' '/tmp/graph17960700732982130174.bin' '-l' '-1' '-v' '-w' '/tmp/graph17960700732982130174.weights' '-q' '0' '-e' '0.001'
[2025-06-02 15:02:00] [INFO ] Decomposing Gal with order
[2025-06-02 15:02:00] [INFO ] Rewriting arrays to variables to allow decomposition.
[2025-06-02 15:02:01] [INFO ] Removed a total of 544 redundant transitions.
[2025-06-02 15:02:01] [INFO ] Flatten gal took : 543 ms
[2025-06-02 15:02:01] [INFO ] Fuse similar labels procedure discarded/fused a total of 80 labels/synchronizations in 68 ms.
[2025-06-02 15:02:01] [INFO ] Time to serialize gal into /tmp/StateSpace11115156335384168965.gal : 84 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace11115156335384168965.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...220
Detected timeout of ITS tools.
[2025-06-02 15:22:24] [INFO ] Flatten gal took : 141 ms
[2025-06-02 15:22:24] [INFO ] Time to serialize gal into /tmp/StateSpace7327158163790295829.gal : 32 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace7327158163790295829.gal' '-t' 'CGAL' '--stats' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...240
Detected timeout of ITS tools.
[2025-06-02 15:42:47] [INFO ] Flatten gal took : 134 ms
[2025-06-02 15:42:47] [INFO ] Input system was already deterministic with 4680 transitions.
[2025-06-02 15:42:47] [INFO ] Transformed 1600 places.
[2025-06-02 15:42:47] [INFO ] Transformed 4680 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2025-06-02 15:42:48] [INFO ] Time to serialize gal into /tmp/StateSpace4798629170990709741.gal : 29 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace4798629170990709741.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...285
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202505121319.jar
+ VERSION=202505121319
+ echo 'Running Version 202505121319'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Diffusion2D-PT-D40N100"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5832"
echo " Executing tool itstools"
echo " Input is Diffusion2D-PT-D40N100, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r058-smll-174854064400568"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Diffusion2D-PT-D40N100.tgz
mv Diffusion2D-PT-D40N100 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;