Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2025-input.r014-tall-174853743400159.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2025-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..................
=====================================================================
Generated by BenchKit 2-5832
Executing tool gold2024
Input is Angiogenesis-PT-20, examination is Liveness
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r014-tall-174853743400159
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 496K
-rw-r--r-- 1 mcc users 7.0K May 29 14:47 CTLCardinality.txt
-rw-r--r-- 1 mcc users 69K May 29 14:47 CTLCardinality.xml
-rw-r--r-- 1 mcc users 7.0K May 29 14:47 CTLFireability.txt
-rw-r--r-- 1 mcc users 73K May 29 14:47 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 29 14:32 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.4K May 29 14:47 LTLCardinality.txt
-rw-r--r-- 1 mcc users 29K May 29 14:47 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 29 14:47 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 29 14:47 LTLFireability.xml
-rw-r--r-- 1 mcc users 11K May 29 14:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 95K May 29 14:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 9.2K May 29 14:47 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 84K May 29 14:47 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 29 14:47 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 29 14:47 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 29 14:32 equiv_col
-rw-r--r-- 1 mcc users 3 May 29 14:32 instance
-rw-r--r-- 1 mcc users 6 May 29 14:32 iscolored
-rw-r--r-- 1 mcc users 33K May 29 14:32 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME Liveness

=== Now, execution of the tool begins

BK_START 1748544623119

Invoking MCC driver with
BK_TOOL=gold2024
BK_EXAMINATION=Liveness
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=Angiogenesis-PT-20
BK_MEMORY_CONFINEMENT=16384
Applying reductions before tool greatspn
Invoking reducer
Running Version 202405141337
[2025-05-29 18:50:24] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, Liveness, -timeout, 180, -rebuildPNML]
[2025-05-29 18:50:24] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2025-05-29 18:50:24] [INFO ] Load time of PNML (sax parser for PT used): 46 ms
[2025-05-29 18:50:24] [INFO ] Transformed 39 places.
[2025-05-29 18:50:24] [INFO ] Transformed 64 transitions.
[2025-05-29 18:50:24] [INFO ] Parsed PT model containing 39 places and 64 transitions and 185 arcs in 157 ms.
Discarding 24 transitions out of 64. Remains 40
Built sparse matrix representations for Structural reductions in 4 ms.19715KB memory used
Starting structural reductions in DEADLOCK mode, iteration 0 : 39/39 places, 64/64 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.4 ms
Discarding 1 places :
Also discarding 0 output transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 1 rules in 31 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in DEADLOCK mode , in 1 iterations and 44 ms. Remains : 38/39 places, 64/64 transitions.
Random walk for 1250000 steps, including 0 resets, run took 624 ms (no deadlock found). (steps per millisecond=2003 )
Random directed walk for 1250000 steps, including 0 resets, run took 259 ms (no deadlock found). (steps per millisecond=4826 )
// Phase 1: matrix 64 rows 38 cols
[2025-05-29 18:50:25] [INFO ] Computed 7 invariants in 11 ms
[2025-05-29 18:50:25] [INFO ] [Real]Absence check using 7 positive place invariants in 4 ms returned sat
[2025-05-29 18:50:25] [INFO ] [Real]Absence check using state equation in 27 ms returned sat
[2025-05-29 18:50:25] [INFO ] Solution in real domain found non-integer solution.
[2025-05-29 18:50:25] [INFO ] [Nat]Absence check using 7 positive place invariants in 2 ms returned sat
[2025-05-29 18:50:25] [INFO ] [Nat]Absence check using state equation in 19 ms returned sat
[2025-05-29 18:50:25] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 7 ms.
[2025-05-29 18:50:26] [INFO ] Added : 55 causal constraints over 11 iterations in 86 ms. Result :sat
Parikh directed walk for 25300 steps, including 197 resets, run took 51 ms. (steps per millisecond=496 )
Random directed walk for 500017 steps, including 0 resets, run took 84 ms (no deadlock found). (steps per millisecond=5952 )
Finished random walk after 3174 steps, including 0 resets, run found a deadlock after 1 ms. (steps per millisecond=3174 )
FORMULA Liveness FALSE TECHNIQUES STRUCTURAL DEADLOCK_TEST
Total runtime 1869 ms.
ITS solved all properties within timeout

BK_STOP 1748544626252

--------------------
content from stderr:

+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination Liveness -timeout 180 -rebuildPNML

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-20"
export BK_EXAMINATION="Liveness"
export BK_TOOL="gold2024"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5832"
echo " Executing tool gold2024"
echo " Input is Angiogenesis-PT-20, examination is Liveness"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r014-tall-174853743400159"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-20.tgz
mv Angiogenesis-PT-20 execution
cd execution
if [ "Liveness" = "ReachabilityDeadlock" ] || [ "Liveness" = "UpperBounds" ] || [ "Liveness" = "QuasiLiveness" ] || [ "Liveness" = "StableMarking" ] || [ "Liveness" = "Liveness" ] || [ "Liveness" = "OneSafe" ] || [ "Liveness" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "Liveness" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "Liveness" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "Liveness.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' Liveness.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "Liveness" = "ReachabilityDeadlock" ] || [ "Liveness" = "QuasiLiveness" ] || [ "Liveness" = "StableMarking" ] || [ "Liveness" = "Liveness" ] || [ "Liveness" = "OneSafe" ] ; then
echo "FORMULA_NAME Liveness"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;