Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/data/fkordon/mcc2025-input.r007-tall-174853737100163.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2025-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
........................................................................................................................................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-5832
Executing tool itstools
Input is Angiogenesis-PT-25, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r007-tall-174853737100163
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 548K
-rw-r--r-- 1 mcc users 7.3K May 29 14:47 CTLCardinality.txt
-rw-r--r-- 1 mcc users 69K May 29 14:47 CTLCardinality.xml
-rw-r--r-- 1 mcc users 4.7K May 29 14:47 CTLFireability.txt
-rw-r--r-- 1 mcc users 40K May 29 14:47 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 29 14:32 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.0K May 29 14:47 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K May 29 14:47 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K May 29 14:47 LTLFireability.txt
-rw-r--r-- 1 mcc users 20K May 29 14:47 LTLFireability.xml
-rw-r--r-- 1 mcc users 16K May 29 14:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 151K May 29 14:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 13K May 29 14:47 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 116K May 29 14:47 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 29 14:47 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 29 14:47 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 29 14:32 equiv_col
-rw-r--r-- 1 mcc users 3 May 29 14:32 instance
-rw-r--r-- 1 mcc users 6 May 29 14:32 iscolored
-rw-r--r-- 1 mcc users 33K May 29 14:32 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1748541362340

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StableMarking
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=Angiogenesis-PT-25
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StableMarking PT
Running Version 202505121319
[2025-05-29 17:56:03] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2025-05-29 17:56:03] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2025-05-29 17:56:03] [INFO ] Load time of PNML (sax parser for PT used): 48 ms
[2025-05-29 17:56:03] [INFO ] Transformed 39 places.
[2025-05-29 17:56:03] [INFO ] Transformed 64 transitions.
[2025-05-29 17:56:03] [INFO ] Parsed PT model containing 39 places and 64 transitions and 185 arcs in 136 ms.
RANDOM walk for 40056 steps (8 resets) in 355 ms. (112 steps per ms) remains 5/39 properties
BEST_FIRST walk for 40004 steps (8 resets) in 217 ms. (183 steps per ms) remains 1/5 properties
BEST_FIRST walk for 40004 steps (8 resets) in 138 ms. (287 steps per ms) remains 1/1 properties
// Phase 1: matrix 64 rows 39 cols
[2025-05-29 17:56:04] [INFO ] Computed 8 invariants in 7 ms
[2025-05-29 17:56:04] [INFO ] Flatten gal took : 31 ms
[2025-05-29 17:56:04] [INFO ] Flatten gal took : 12 ms
[2025-05-29 17:56:04] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality4583845223320057720.gal : 8 ms
[2025-05-29 17:56:04] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality11831268443424516917.prop : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality4583845223320057720.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality11831268443424516917.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality11831268443424516917.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 5
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :5 after 10
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :10 after 19
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :19 after 52
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :52 after 1103
All remaining problems are real, not stopping.
At refinement iteration 0 (INCLUDED_ONLY) 0/1 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 1 (OVERLAPS) 33/34 variables, 4/4 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 2 (INCLUDED_ONLY) 0/34 variables, 0/4 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 3 (OVERLAPS) 5/39 variables, 4/8 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/39 variables, 0/8 constraints. Problems are: Problem set: 0 solved, 1 unsolved
SDD proceeding with computation,1 properties remain. new max is 128
At refinement iteration 5 (OVERLAPS) 64/103 variables, 39/47 constraints. Problems are: Problem set: 0 solved, 1 unsolved
SDD size :1103 after 3128
At refinement iteration 6 (INCLUDED_ONLY) 0/103 variables, 0/47 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 7 (OVERLAPS) 0/103 variables, 0/47 constraints. Problems are: Problem set: 0 solved, 1 unsolved
No progress, stopping.
After SMT solving in domain Real declared 103/103 variables, and 47 constraints, problems are : Problem set: 0 solved, 1 unsolved in 273 ms.
Refiners :[Positive P Invariants (semi-flows): 8/8 constraints, State Equation: 39/39 constraints, PredecessorRefiner: 1/1 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 1 unsolved
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/1 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 1 (OVERLAPS) 33/34 variables, 4/4 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 2 (INCLUDED_ONLY) 0/34 variables, 0/4 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 3 (OVERLAPS) 5/39 variables, 4/8 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/39 variables, 0/8 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 5 (OVERLAPS) 64/103 variables, 39/47 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 6 (INCLUDED_ONLY) 0/103 variables, 1/48 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 7 (INCLUDED_ONLY) 0/103 variables, 0/48 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 8 (OVERLAPS) 0/103 variables, 0/48 constraints. Problems are: Problem set: 0 solved, 1 unsolved
No progress, stopping.
After SMT solving in domain Int declared 103/103 variables, and 48 constraints, problems are : Problem set: 0 solved, 1 unsolved in 134 ms.
Refiners :[Positive P Invariants (semi-flows): 8/8 constraints, State Equation: 39/39 constraints, PredecessorRefiner: 1/1 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
After SMT, in 450ms problems are : Problem set: 0 solved, 1 unsolved
Parikh walk visited 0 properties in 44 ms.
Support contains 1 out of 39 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 39/39 places, 64/64 transitions.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.1 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 1 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 4 place count 36 transition count 63
Drop transitions (Empty/Sink Transition effects.) removed 1 transitions
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 5 place count 36 transition count 62
Performed 10 Post agglomeration using F-continuation condition.Transition count delta: 10
Deduced a syphon composed of 10 places in 1 ms
Reduce places removed 10 places and 0 transitions.
Iterating global reduction 1 with 20 rules applied. Total rules applied 25 place count 26 transition count 52
Drop transitions (Empty/Sink Transition effects.) removed 9 transitions
Reduce isomorphic transitions removed 9 transitions.
Graph (complete) has 78 edges and 26 vertex of which 25 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.0 ms
Discarding 1 places :
Also discarding 0 output transitions
Iterating post reduction 1 with 10 rules applied. Total rules applied 35 place count 25 transition count 43
Drop transitions (Empty/Sink Transition effects.) removed 1 transitions
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 2 with 1 rules applied. Total rules applied 36 place count 25 transition count 42
Performed 5 Post agglomeration using F-continuation condition.Transition count delta: -6
Deduced a syphon composed of 5 places in 0 ms
Reduce places removed 5 places and 0 transitions.
Iterating global reduction 3 with 10 rules applied. Total rules applied 46 place count 20 transition count 48
Drop transitions (Empty/Sink Transition effects.) removed 10 transitions
Reduce isomorphic transitions removed 10 transitions.
Iterating post reduction 3 with 10 rules applied. Total rules applied 56 place count 20 transition count 38
Drop transitions (Redundant composition of simpler transitions.) removed 5 transitions
Redundant transition composition rules discarded 5 transitions
Iterating global reduction 4 with 5 rules applied. Total rules applied 61 place count 20 transition count 33
Free-agglomeration rule (complex) applied 5 times.
Iterating global reduction 4 with 5 rules applied. Total rules applied 66 place count 20 transition count 28
Reduce places removed 5 places and 0 transitions.
Drop transitions (Empty/Sink Transition effects.) removed 3 transitions
Reduce isomorphic transitions removed 3 transitions.
Iterating post reduction 4 with 8 rules applied. Total rules applied 74 place count 15 transition count 25
Drop transitions (Redundant composition of simpler transitions.) removed 1 transitions
Redundant transition composition rules discarded 1 transitions
Iterating global reduction 5 with 1 rules applied. Total rules applied 75 place count 15 transition count 24
Partial Free-agglomeration rule applied 1 times.
Drop transitions (Partial Free agglomeration) removed 1 transitions
Iterating global reduction 5 with 1 rules applied. Total rules applied 76 place count 15 transition count 24
Applied a total of 76 rules in 42 ms. Remains 15 /39 variables (removed 24) and now considering 24/64 (removed 40) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 49 ms. Remains : 15/39 places, 24/64 transitions.
RANDOM walk for 110416 steps (0 resets) in 180 ms. (610 steps per ms) remains 0/1 properties
ITS runner timed out or was interrupted.
ITS tools runner thread asked to quit. Dying gracefully.
Able to resolve query StableMarking after proving 39 properties.
FORMULA StableMarking FALSE TECHNIQUES RANDOM_WALK BESTFIRST_WALK TOPOLOGICAL
Total runtime 1109 ms.

BK_STOP 1748541364702

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StableMarking = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202505121319.jar
+ VERSION=202505121319
+ echo 'Running Version 202505121319'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-25"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5832"
echo " Executing tool itstools"
echo " Input is Angiogenesis-PT-25, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r007-tall-174853737100163"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-25.tgz
mv Angiogenesis-PT-25 execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;