Execution Chart

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Trace from the execution

Formatting '/data/fkordon/mcc2025-input.r002-tall-174853728900253.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2025-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.........................................................................
=====================================================================
Generated by BenchKit 2-5832
Executing tool itstools
Input is Angiogenesis-PT-20, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r002-tall-174853728900253
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 496K
-rw-r--r-- 1 mcc users 7.0K May 29 14:47 CTLCardinality.txt
-rw-r--r-- 1 mcc users 69K May 29 14:47 CTLCardinality.xml
-rw-r--r-- 1 mcc users 7.0K May 29 14:47 CTLFireability.txt
-rw-r--r-- 1 mcc users 73K May 29 14:47 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 29 14:32 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.4K May 29 14:47 LTLCardinality.txt
-rw-r--r-- 1 mcc users 29K May 29 14:47 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 29 14:47 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 29 14:47 LTLFireability.xml
-rw-r--r-- 1 mcc users 11K May 29 14:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 95K May 29 14:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 9.2K May 29 14:47 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 84K May 29 14:47 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 29 14:47 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 29 14:47 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 29 14:32 equiv_col
-rw-r--r-- 1 mcc users 3 May 29 14:32 instance
-rw-r--r-- 1 mcc users 6 May 29 14:32 iscolored
-rw-r--r-- 1 mcc users 33K May 29 14:32 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

echo here is the order used to build the result vector(from xml file)
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-00
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-01
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-02
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-03
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-04
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-05
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-06
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-07
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-08
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-09
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-10
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-11
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-12
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-13
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-14
FORMULA_NAME Angiogenesis-PT-20-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1748560536920

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=UpperBounds
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Angiogenesis-PT-20
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
UpperBounds PT
Running Version 202505121319
[2025-05-29 23:15:38] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2025-05-29 23:15:38] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2025-05-29 23:15:38] [INFO ] Load time of PNML (sax parser for PT used): 49 ms
[2025-05-29 23:15:38] [INFO ] Transformed 39 places.
[2025-05-29 23:15:38] [INFO ] Transformed 64 transitions.
[2025-05-29 23:15:38] [INFO ] Parsed PT model containing 39 places and 64 transitions and 185 arcs in 139 ms.
Parsed 16 properties from file /home/mcc/execution/UpperBounds.xml in 7 ms.
Current structural bounds on expressions (Initially) : Max Seen:[0, 0, 20, 20, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 20, 0] Max Struct:[+inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf]
Current structural bounds on expressions (Before main loop) : Max Seen:[0, 0, 20, 20, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 20, 0] Max Struct:[+inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf, +inf]
// Phase 1: matrix 64 rows 39 cols
[2025-05-29 23:15:38] [INFO ] Computed 8 invariants in 10 ms
Current structural bounds on expressions (after invariants) : Max Seen:[0, 0, 20, 20, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 20, 0] Max Struct:[20, 20, 20, 20, 20, 10, 20, 20, 20, 20, 20, 20, 20, 10, 20, 20]
FORMULA Angiogenesis-PT-20-UpperBounds-14 20 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-20-UpperBounds-03 20 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-20-UpperBounds-02 20 TECHNIQUES TOPOLOGICAL INITIAL_STATE
RANDOM walk for 10000 steps (2 resets) in 12 ms. (769 steps per ms)
FORMULA Angiogenesis-PT-20-UpperBounds-15 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-12 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-11 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-10 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-09 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-08 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-07 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-06 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-01 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-00 20 TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
BEST_FIRST walk for 30003 steps (6 resets) in 37 ms. (789 steps per ms)
Current structural bounds on expressions (after WALK) : Max Seen:[1, 1, 1] Max Struct:[20, 10, 10]
[2025-05-29 23:15:38] [INFO ] Invariant cache hit.
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
[2025-05-29 23:15:38] [INFO ] [Real]Absence check using 8 positive place invariants in 6 ms returned sat
[2025-05-29 23:15:38] [INFO ] [Real]Absence check using state equation in 32 ms returned sat
[2025-05-29 23:15:38] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 10 ms.
[2025-05-29 23:15:38] [INFO ] Solution in real domain found non-integer solution.
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
[2025-05-29 23:15:38] [INFO ] [Nat]Absence check using 8 positive place invariants in 3 ms returned sat
[2025-05-29 23:15:38] [INFO ] [Nat]Absence check using state equation in 20 ms returned sat
[2025-05-29 23:15:38] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 5 ms.
[2025-05-29 23:15:38] [INFO ] Added : 47 causal constraints over 10 iterations in 78 ms. Result :sat
Minimization took 36 ms.
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
[2025-05-29 23:15:38] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned sat
[2025-05-29 23:15:38] [INFO ] [Real]Absence check using state equation in 22 ms returned sat
[2025-05-29 23:15:38] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 5 ms.
[2025-05-29 23:15:38] [INFO ] Solution in real domain found non-integer solution.
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
[2025-05-29 23:15:38] [INFO ] [Nat]Absence check using 8 positive place invariants in 2 ms returned sat
[2025-05-29 23:15:38] [INFO ] [Nat]Absence check using state equation in 18 ms returned sat
[2025-05-29 23:15:38] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 5 ms.
[2025-05-29 23:15:39] [INFO ] Added : 48 causal constraints over 10 iterations in 68 ms. Result :sat
Minimization took 19 ms.
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
[2025-05-29 23:15:39] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned sat
[2025-05-29 23:15:39] [INFO ] [Real]Absence check using state equation in 15 ms returned sat
[2025-05-29 23:15:39] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 7 ms.
[2025-05-29 23:15:39] [INFO ] Solution in real domain found non-integer solution.
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
[2025-05-29 23:15:39] [INFO ] [Nat]Absence check using 8 positive place invariants in 2 ms returned sat
[2025-05-29 23:15:39] [INFO ] [Nat]Absence check using state equation in 21 ms returned sat
[2025-05-29 23:15:39] [INFO ] Computed and/alt/rep : 59/142/59 causal constraints (skipped 2 transitions) in 7 ms.
[2025-05-29 23:15:39] [INFO ] Added : 47 causal constraints over 10 iterations in 68 ms. Result :sat
Minimization took 20 ms.
Current structural bounds on expressions (after SMT) : Max Seen:[1, 1, 1] Max Struct:[20, 10, 10]
FORMULA Angiogenesis-PT-20-UpperBounds-13 10 TECHNIQUES TOPOLOGICAL PARIKH_WALK
FORMULA Angiogenesis-PT-20-UpperBounds-05 10 TECHNIQUES TOPOLOGICAL PARIKH_WALK
Current structural bounds on expressions (After Parikh guided walk) : Max Seen:[13] Max Struct:[20]
Support contains 1 out of 39 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 39/39 places, 64/64 transitions.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.1 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 1 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 4 place count 36 transition count 63
Drop transitions (Empty/Sink Transition effects.) removed 1 transitions
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 5 place count 36 transition count 62
Performed 10 Post agglomeration using F-continuation condition.Transition count delta: 10
Deduced a syphon composed of 10 places in 0 ms
Reduce places removed 10 places and 0 transitions.
Iterating global reduction 1 with 20 rules applied. Total rules applied 25 place count 26 transition count 52
Drop transitions (Empty/Sink Transition effects.) removed 9 transitions
Reduce isomorphic transitions removed 9 transitions.
Graph (complete) has 79 edges and 26 vertex of which 25 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.0 ms
Discarding 1 places :
Also discarding 0 output transitions
Iterating post reduction 1 with 10 rules applied. Total rules applied 35 place count 25 transition count 43
Drop transitions (Empty/Sink Transition effects.) removed 1 transitions
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 2 with 1 rules applied. Total rules applied 36 place count 25 transition count 42
Performed 5 Post agglomeration using F-continuation condition.Transition count delta: -6
Deduced a syphon composed of 5 places in 0 ms
Reduce places removed 5 places and 0 transitions.
Iterating global reduction 3 with 10 rules applied. Total rules applied 46 place count 20 transition count 48
Drop transitions (Empty/Sink Transition effects.) removed 10 transitions
Reduce isomorphic transitions removed 10 transitions.
Iterating post reduction 3 with 10 rules applied. Total rules applied 56 place count 20 transition count 38
Drop transitions (Redundant composition of simpler transitions.) removed 6 transitions
Redundant transition composition rules discarded 6 transitions
Iterating global reduction 4 with 6 rules applied. Total rules applied 62 place count 20 transition count 32
Free-agglomeration rule (complex) applied 5 times.
Iterating global reduction 4 with 5 rules applied. Total rules applied 67 place count 20 transition count 27
Reduce places removed 5 places and 0 transitions.
Drop transitions (Empty/Sink Transition effects.) removed 2 transitions
Reduce isomorphic transitions removed 2 transitions.
Iterating post reduction 4 with 7 rules applied. Total rules applied 74 place count 15 transition count 25
Drop transitions (Redundant composition of simpler transitions.) removed 1 transitions
Redundant transition composition rules discarded 1 transitions
Iterating global reduction 5 with 1 rules applied. Total rules applied 75 place count 15 transition count 24
Applied a total of 75 rules in 35 ms. Remains 15 /39 variables (removed 24) and now considering 24/64 (removed 40) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 43 ms. Remains : 15/39 places, 24/64 transitions.
[2025-05-29 23:15:39] [INFO ] Flow matrix only has 23 transitions (discarded 1 similar events)
// Phase 1: matrix 23 rows 15 cols
[2025-05-29 23:15:39] [INFO ] Computed 6 invariants in 1 ms
Current structural bounds on expressions (after invariants) : Max Seen:[13] Max Struct:[20]
RANDOM walk for 1000018 steps (2 resets) in 269 ms. (3703 steps per ms)
BEST_FIRST walk for 1000001 steps (2 resets) in 385 ms. (2590 steps per ms)
Current structural bounds on expressions (after WALK) : Max Seen:[13] Max Struct:[20]
[2025-05-29 23:15:40] [INFO ] Flow matrix only has 23 transitions (discarded 1 similar events)
[2025-05-29 23:15:40] [INFO ] Invariant cache hit.
Starting Z3 with timeout 45.0 s and query timeout 4500.0 ms
[2025-05-29 23:15:40] [INFO ] [Real]Absence check using 6 positive place invariants in 1 ms returned sat
[2025-05-29 23:15:40] [INFO ] [Real]Absence check using state equation in 6 ms returned sat
[2025-05-29 23:15:40] [INFO ] State equation strengthened by 1 read => feed constraints.
[2025-05-29 23:15:40] [INFO ] [Real]Added 1 Read/Feed constraints in 1 ms returned sat
[2025-05-29 23:15:40] [INFO ] Solution in real domain found non-integer solution.
Starting Z3 with timeout 45.0 s and query timeout 4500.0 ms
[2025-05-29 23:15:40] [INFO ] [Nat]Absence check using 6 positive place invariants in 1 ms returned sat
[2025-05-29 23:15:40] [INFO ] [Nat]Absence check using state equation in 12 ms returned sat
[2025-05-29 23:15:40] [INFO ] [Nat]Added 1 Read/Feed constraints in 1 ms returned sat
[2025-05-29 23:15:40] [INFO ] Computed and/alt/rep : 22/72/21 causal constraints (skipped 0 transitions) in 2 ms.
[2025-05-29 23:15:40] [INFO ] Added : 19 causal constraints over 4 iterations in 22 ms. Result :sat
Minimization took 118 ms.
Current structural bounds on expressions (after SMT) : Max Seen:[13] Max Struct:[20]
Current structural bounds on expressions (After Parikh guided walk) : Max Seen:[18] Max Struct:[20]
Support contains 1 out of 15 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 15/15 places, 24/24 transitions.
Applied a total of 0 rules in 1 ms. Remains 15 /15 variables (removed 0) and now considering 24/24 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 1 ms. Remains : 15/15 places, 24/24 transitions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 15/15 places, 24/24 transitions.
Applied a total of 0 rules in 0 ms. Remains 15 /15 variables (removed 0) and now considering 24/24 (removed 0) transitions.
[2025-05-29 23:15:40] [INFO ] Flow matrix only has 23 transitions (discarded 1 similar events)
[2025-05-29 23:15:40] [INFO ] Invariant cache hit.
Starting Z3 with timeout 160.0 s and query timeout 16000.0 ms
[2025-05-29 23:15:40] [INFO ] Implicit Places using invariants in 45 ms returned [5, 11, 12, 13]
Discarding 4 places :
Implicit Place search using SMT only with invariants took 48 ms to find 4 implicit places.
Starting structural reductions in REACHABILITY mode, iteration 1 : 11/15 places, 24/24 transitions.
Graph (trivial) has 14 edges and 11 vertex of which 6 / 11 are part of one of the 2 SCC in 5 ms
Free SCC test removed 4 places
Drop transitions (Empty/Sink Transition effects.) removed 12 transitions
Reduce isomorphic transitions removed 12 transitions.
Drop transitions (Redundant composition of simpler transitions.) removed 1 transitions
Redundant transition composition rules discarded 1 transitions
Iterating global reduction 0 with 1 rules applied. Total rules applied 2 place count 7 transition count 11
Applied a total of 2 rules in 8 ms. Remains 7 /11 variables (removed 4) and now considering 11/24 (removed 13) transitions.
[2025-05-29 23:15:40] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
// Phase 1: matrix 10 rows 7 cols
[2025-05-29 23:15:40] [INFO ] Computed 2 invariants in 1 ms
Starting Z3 with timeout 160.0 s and query timeout 16000.0 ms
[2025-05-29 23:15:40] [INFO ] Implicit Places using invariants in 26 ms returned []
[2025-05-29 23:15:40] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:40] [INFO ] Invariant cache hit.
Starting Z3 with timeout 160.0 s and query timeout 16000.0 ms
[2025-05-29 23:15:40] [INFO ] State equation strengthened by 1 read => feed constraints.
[2025-05-29 23:15:40] [INFO ] Implicit Places using invariants and state equation in 30 ms returned []
Implicit Place search using SMT with State Equation took 58 ms to find 0 implicit places.
Starting structural reductions in REACHABILITY mode, iteration 2 : 7/15 places, 11/24 transitions.
Finished structural reductions in REACHABILITY mode , in 2 iterations and 118 ms. Remains : 7/15 places, 11/24 transitions.
[2025-05-29 23:15:40] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:40] [INFO ] Invariant cache hit.
Current structural bounds on expressions (after invariants) : Max Seen:[18] Max Struct:[20]
RANDOM walk for 1000000 steps (2 resets) in 148 ms. (6711 steps per ms)
BEST_FIRST walk for 1000001 steps (2 resets) in 278 ms. (3584 steps per ms)
Current structural bounds on expressions (after WALK) : Max Seen:[18] Max Struct:[20]
[2025-05-29 23:15:40] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:40] [INFO ] Invariant cache hit.
Starting Z3 with timeout 45.0 s and query timeout 4500.0 ms
[2025-05-29 23:15:40] [INFO ] [Real]Absence check using 2 positive place invariants in 1 ms returned sat
[2025-05-29 23:15:41] [INFO ] [Real]Absence check using state equation in 4 ms returned sat
[2025-05-29 23:15:41] [INFO ] State equation strengthened by 1 read => feed constraints.
[2025-05-29 23:15:41] [INFO ] [Real]Added 1 Read/Feed constraints in 3 ms returned sat
[2025-05-29 23:15:41] [INFO ] Computed and/alt/rep : 10/23/9 causal constraints (skipped 0 transitions) in 1 ms.
[2025-05-29 23:15:41] [INFO ] Solution in real domain found non-integer solution.
Starting Z3 with timeout 45.0 s and query timeout 4500.0 ms
[2025-05-29 23:15:41] [INFO ] [Nat]Absence check using 2 positive place invariants in 1 ms returned sat
[2025-05-29 23:15:41] [INFO ] [Nat]Absence check using state equation in 4 ms returned sat
[2025-05-29 23:15:41] [INFO ] [Nat]Added 1 Read/Feed constraints in 1 ms returned sat
[2025-05-29 23:15:41] [INFO ] Computed and/alt/rep : 10/23/9 causal constraints (skipped 0 transitions) in 0 ms.
[2025-05-29 23:15:41] [INFO ] Added : 5 causal constraints over 2 iterations in 4 ms. Result :sat
Minimization took 4 ms.
Current structural bounds on expressions (after SMT) : Max Seen:[18] Max Struct:[20]
Current structural bounds on expressions (After Parikh guided walk) : Max Seen:[18] Max Struct:[20]
Support contains 1 out of 7 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 7/7 places, 11/11 transitions.
Applied a total of 0 rules in 0 ms. Remains 7 /7 variables (removed 0) and now considering 11/11 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 0 ms. Remains : 7/7 places, 11/11 transitions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 7/7 places, 11/11 transitions.
Applied a total of 0 rules in 1 ms. Remains 7 /7 variables (removed 0) and now considering 11/11 (removed 0) transitions.
[2025-05-29 23:15:41] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:41] [INFO ] Invariant cache hit.
Starting Z3 with timeout 160.0 s and query timeout 16000.0 ms
[2025-05-29 23:15:41] [INFO ] Implicit Places using invariants in 25 ms returned []
[2025-05-29 23:15:41] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:41] [INFO ] Invariant cache hit.
Starting Z3 with timeout 160.0 s and query timeout 16000.0 ms
[2025-05-29 23:15:41] [INFO ] State equation strengthened by 1 read => feed constraints.
[2025-05-29 23:15:41] [INFO ] Implicit Places using invariants and state equation in 25 ms returned []
Implicit Place search using SMT with State Equation took 52 ms to find 0 implicit places.
Starting Z3 with timeout 200.0 s and query timeout 20000.0 ms
[2025-05-29 23:15:41] [INFO ] Redundant transitions in 0 ms returned []
Running 10 sub problems to find dead transitions.
[2025-05-29 23:15:41] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:41] [INFO ] Invariant cache hit.
[2025-05-29 23:15:41] [INFO ] State equation strengthened by 1 read => feed constraints.
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/7 variables, 2/2 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/7 variables, 0/2 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 2 (OVERLAPS) 10/17 variables, 7/9 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/17 variables, 1/10 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/17 variables, 0/10 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 5 (OVERLAPS) 0/17 variables, 0/10 constraints. Problems are: Problem set: 0 solved, 10 unsolved
No progress, stopping.
After SMT solving in domain Real declared 17/17 variables, and 10 constraints, problems are : Problem set: 0 solved, 10 unsolved in 115 ms.
Refiners :[Positive P Invariants (semi-flows): 2/2 constraints, State Equation: 7/7 constraints, ReadFeed: 1/1 constraints, PredecessorRefiner: 10/10 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 10 unsolved
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/7 variables, 2/2 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/7 variables, 0/2 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 2 (OVERLAPS) 10/17 variables, 7/9 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/17 variables, 1/10 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/17 variables, 10/20 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/17 variables, 0/20 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 6 (OVERLAPS) 0/17 variables, 0/20 constraints. Problems are: Problem set: 0 solved, 10 unsolved
No progress, stopping.
After SMT solving in domain Int declared 17/17 variables, and 20 constraints, problems are : Problem set: 0 solved, 10 unsolved in 98 ms.
Refiners :[Positive P Invariants (semi-flows): 2/2 constraints, State Equation: 7/7 constraints, ReadFeed: 1/1 constraints, PredecessorRefiner: 10/10 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
After SMT, in 235ms problems are : Problem set: 0 solved, 10 unsolved
Search for dead transitions found 0 dead transitions in 241ms
Finished structural reductions in REACHABILITY mode , in 1 iterations and 303 ms. Remains : 7/7 places, 11/11 transitions.
RANDOM walk for 40040 steps (8 resets) in 149 ms. (266 steps per ms) remains 2/2 properties
BEST_FIRST walk for 40004 steps (8 resets) in 124 ms. (320 steps per ms) remains 2/2 properties
BEST_FIRST walk for 40004 steps (8 resets) in 108 ms. (367 steps per ms) remains 2/2 properties
[2025-05-29 23:15:41] [INFO ] Flatten gal took : 23 ms
[2025-05-29 23:15:41] [INFO ] Flatten gal took : 9 ms
[2025-05-29 23:15:41] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality4424359150454812969.gal : 4 ms
[2025-05-29 23:15:41] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality17611395788054396310.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality4424359150454812969.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality17611395788054396310.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality17611395788054396310.prop.
SDD proceeding with computation,2 properties remain. new max is 4
SDD size :4 after 6
SDD proceeding with computation,2 properties remain. new max is 8
SDD size :6 after 10
SDD proceeding with computation,2 properties remain. new max is 16
SDD size :10 after 30
SDD proceeding with computation,2 properties remain. new max is 32
SDD size :30 after 205
SDD proceeding with computation,2 properties remain. new max is 64
SDD size :205 after 1350
SDD proceeding with computation,2 properties remain. new max is 128
SDD size :25758 after 25991
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst,93864,0.077474,6292,2,926,13,17302,8,0,44,16262,0
Total reachable state count : 93864

Verifying 2 reachability properties.
Reachability property MAX0 does not hold.
No reachable states exhibit your property : MAX0

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAX0,0,0.078214,6292,1,0,13,17302,8,0,45,16262,0
Invariant property MIN0 does not hold.

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MIN0,1,0.078523,6420,2,8,13,17302,8,0,46,16262,0
Probably explored full state space saw : 93863 states, properties seen :1
Probabilistic random walk after 869423 steps, saw 93863 distinct states, run finished after 1010 ms. (steps per millisecond=860 ) properties seen :1
Explored full state space saw : 93864 states, properties seen :0
Exhaustive walk after 869430 steps, saw 93864 distinct states, run finished after 304 ms. (steps per millisecond=2859 ) properties seen :0
Current structural bounds on expressions (After reachability solving 0 queries.) : Max Seen:[18] Max Struct:[20]
Starting property specific reduction for Angiogenesis-PT-20-UpperBounds-04
Current structural bounds on expressions (Initially) : Max Seen:[0] Max Struct:[+inf]
Current structural bounds on expressions (Adding known information on max bounds.) : Max Seen:[0] Max Struct:[20]
Current structural bounds on expressions (Before main loop) : Max Seen:[0] Max Struct:[20]
[2025-05-29 23:15:42] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:42] [INFO ] Invariant cache hit.
Current structural bounds on expressions (after invariants) : Max Seen:[0] Max Struct:[20]
RANDOM walk for 10006 steps (2 resets) in 2 ms. (3335 steps per ms)
BEST_FIRST walk for 10001 steps (2 resets) in 2 ms. (3333 steps per ms)
Current structural bounds on expressions (after WALK) : Max Seen:[8] Max Struct:[20]
[2025-05-29 23:15:42] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:42] [INFO ] Invariant cache hit.
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
[2025-05-29 23:15:42] [INFO ] [Real]Absence check using 2 positive place invariants in 1 ms returned sat
[2025-05-29 23:15:42] [INFO ] [Real]Absence check using state equation in 5 ms returned sat
[2025-05-29 23:15:42] [INFO ] State equation strengthened by 1 read => feed constraints.
[2025-05-29 23:15:42] [INFO ] [Real]Added 1 Read/Feed constraints in 0 ms returned sat
[2025-05-29 23:15:42] [INFO ] Computed and/alt/rep : 10/23/9 causal constraints (skipped 0 transitions) in 0 ms.
[2025-05-29 23:15:42] [INFO ] Solution in real domain found non-integer solution.
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
[2025-05-29 23:15:42] [INFO ] [Nat]Absence check using 2 positive place invariants in 0 ms returned sat
[2025-05-29 23:15:42] [INFO ] [Nat]Absence check using state equation in 4 ms returned sat
[2025-05-29 23:15:43] [INFO ] [Nat]Added 1 Read/Feed constraints in 0 ms returned sat
[2025-05-29 23:15:43] [INFO ] Computed and/alt/rep : 10/23/9 causal constraints (skipped 0 transitions) in 0 ms.
[2025-05-29 23:15:43] [INFO ] Added : 5 causal constraints over 2 iterations in 6 ms. Result :sat
Minimization took 6 ms.
Current structural bounds on expressions (after SMT) : Max Seen:[8] Max Struct:[20]
Current structural bounds on expressions (After Parikh guided walk) : Max Seen:[8] Max Struct:[20]
Support contains 1 out of 7 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 7/7 places, 11/11 transitions.
Applied a total of 0 rules in 1 ms. Remains 7 /7 variables (removed 0) and now considering 11/11 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 1 ms. Remains : 7/7 places, 11/11 transitions.
[2025-05-29 23:15:43] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:43] [INFO ] Invariant cache hit.
Current structural bounds on expressions (after invariants) : Max Seen:[8] Max Struct:[20]
RANDOM walk for 1000012 steps (2 resets) in 113 ms. (8772 steps per ms)
BEST_FIRST walk for 1000000 steps (2 resets) in 162 ms. (6134 steps per ms)
Current structural bounds on expressions (after WALK) : Max Seen:[8] Max Struct:[20]
[2025-05-29 23:15:43] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:43] [INFO ] Invariant cache hit.
Starting Z3 with timeout 45.0 s and query timeout 4500.0 ms
[2025-05-29 23:15:43] [INFO ] [Real]Absence check using 2 positive place invariants in 1 ms returned sat
[2025-05-29 23:15:43] [INFO ] [Real]Absence check using state equation in 4 ms returned sat
[2025-05-29 23:15:43] [INFO ] State equation strengthened by 1 read => feed constraints.
[2025-05-29 23:15:43] [INFO ] [Real]Added 1 Read/Feed constraints in 0 ms returned sat
[2025-05-29 23:15:43] [INFO ] Computed and/alt/rep : 10/23/9 causal constraints (skipped 0 transitions) in 1 ms.
[2025-05-29 23:15:43] [INFO ] Solution in real domain found non-integer solution.
Starting Z3 with timeout 45.0 s and query timeout 4500.0 ms
[2025-05-29 23:15:43] [INFO ] [Nat]Absence check using 2 positive place invariants in 1 ms returned sat
[2025-05-29 23:15:43] [INFO ] [Nat]Absence check using state equation in 3 ms returned sat
[2025-05-29 23:15:43] [INFO ] [Nat]Added 1 Read/Feed constraints in 0 ms returned sat
[2025-05-29 23:15:43] [INFO ] Computed and/alt/rep : 10/23/9 causal constraints (skipped 0 transitions) in 2 ms.
[2025-05-29 23:15:43] [INFO ] Added : 5 causal constraints over 2 iterations in 12 ms. Result :sat
Minimization took 9 ms.
Current structural bounds on expressions (after SMT) : Max Seen:[8] Max Struct:[20]
Current structural bounds on expressions (After Parikh guided walk) : Max Seen:[8] Max Struct:[20]
Support contains 1 out of 7 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 7/7 places, 11/11 transitions.
Applied a total of 0 rules in 1 ms. Remains 7 /7 variables (removed 0) and now considering 11/11 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 1 ms. Remains : 7/7 places, 11/11 transitions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 7/7 places, 11/11 transitions.
Applied a total of 0 rules in 0 ms. Remains 7 /7 variables (removed 0) and now considering 11/11 (removed 0) transitions.
[2025-05-29 23:15:43] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:43] [INFO ] Invariant cache hit.
Starting Z3 with timeout 160.0 s and query timeout 16000.0 ms
[2025-05-29 23:15:43] [INFO ] Implicit Places using invariants in 22 ms returned []
[2025-05-29 23:15:43] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:43] [INFO ] Invariant cache hit.
Starting Z3 with timeout 160.0 s and query timeout 16000.0 ms
[2025-05-29 23:15:43] [INFO ] State equation strengthened by 1 read => feed constraints.
[2025-05-29 23:15:43] [INFO ] Implicit Places using invariants and state equation in 41 ms returned []
Implicit Place search using SMT with State Equation took 64 ms to find 0 implicit places.
Starting Z3 with timeout 200.0 s and query timeout 20000.0 ms
[2025-05-29 23:15:43] [INFO ] Redundant transitions in 0 ms returned []
Running 10 sub problems to find dead transitions.
[2025-05-29 23:15:43] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:43] [INFO ] Invariant cache hit.
[2025-05-29 23:15:43] [INFO ] State equation strengthened by 1 read => feed constraints.
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/7 variables, 2/2 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/7 variables, 0/2 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 2 (OVERLAPS) 10/17 variables, 7/9 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/17 variables, 1/10 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/17 variables, 0/10 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 5 (OVERLAPS) 0/17 variables, 0/10 constraints. Problems are: Problem set: 0 solved, 10 unsolved
No progress, stopping.
After SMT solving in domain Real declared 17/17 variables, and 10 constraints, problems are : Problem set: 0 solved, 10 unsolved in 109 ms.
Refiners :[Positive P Invariants (semi-flows): 2/2 constraints, State Equation: 7/7 constraints, ReadFeed: 1/1 constraints, PredecessorRefiner: 10/10 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 10 unsolved
Starting Z3 with timeout 30.0 s and query timeout 3000.0 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/7 variables, 2/2 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/7 variables, 0/2 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 2 (OVERLAPS) 10/17 variables, 7/9 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/17 variables, 1/10 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/17 variables, 10/20 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/17 variables, 0/20 constraints. Problems are: Problem set: 0 solved, 10 unsolved
At refinement iteration 6 (OVERLAPS) 0/17 variables, 0/20 constraints. Problems are: Problem set: 0 solved, 10 unsolved
No progress, stopping.
After SMT solving in domain Int declared 17/17 variables, and 20 constraints, problems are : Problem set: 0 solved, 10 unsolved in 108 ms.
Refiners :[Positive P Invariants (semi-flows): 2/2 constraints, State Equation: 7/7 constraints, ReadFeed: 1/1 constraints, PredecessorRefiner: 10/10 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 0/0 constraints]
After SMT, in 221ms problems are : Problem set: 0 solved, 10 unsolved
Search for dead transitions found 0 dead transitions in 221ms
Finished structural reductions in REACHABILITY mode , in 1 iterations and 290 ms. Remains : 7/7 places, 11/11 transitions.
RANDOM walk for 40035 steps (8 resets) in 20 ms. (1906 steps per ms) remains 2/2 properties
[2025-05-29 23:15:43] [INFO ] Flatten gal took : 12 ms
[2025-05-29 23:15:43] [INFO ] Flatten gal took : 5 ms
[2025-05-29 23:15:43] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality13601163756286642897.gal : 1 ms
[2025-05-29 23:15:43] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality7693242527413862265.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality13601163756286642897.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality7693242527413862265.prop' '--nowitness' '--gen-order' 'FOLLOW'
BEST_FIRST walk for 40004 steps (8 resets) in 33 ms. (1176 steps per ms) remains 1/2 properties
[2025-05-29 23:15:43] [INFO ] Flow matrix only has 10 transitions (discarded 1 similar events)
[2025-05-29 23:15:43] [INFO ] Invariant cache hit.
[2025-05-29 23:15:43] [INFO ] State equation strengthened by 1 read => feed constraints.

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality7693242527413862265.prop.
SDD proceeding with computation,2 properties remain. new max is 4
SDD size :4 after 6
SDD proceeding with computation,2 properties remain. new max is 8
SDD size :6 after 10
SDD proceeding with computation,2 properties remain. new max is 16
SDD size :10 after 30
SDD proceeding with computation,2 properties remain. new max is 32
SDD size :30 after 205
Invariant property MIN0 does not hold.
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :205 after 1350
Starting Z3 with timeout 5.0 s and query timeout 500.0 ms
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :1350 after 7945
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :25758 after 26600
At refinement iteration 0 (INCLUDED_ONLY) 0/1 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 1 (OVERLAPS) 6/7 variables, 2/2 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 2 (INCLUDED_ONLY) 0/7 variables, 0/2 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 3 (OVERLAPS) 10/17 variables, 7/9 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/17 variables, 1/10 constraints. Problems are: Problem set: 0 solved, 1 unsolved
Starting Z3 with timeout 120.0 s and query timeout 12000.0 ms
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst,93864,0.065495,6436,2,926,15,17308,7,0,43,16262,0
Total reachable state count : 93864

Verifying 2 reachability properties.
Reachability property MAX0 does not hold.
No reachable states exhibit your property : MAX0

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAX0,0,0.067067,6564,1,0,15,17308,7,0,44,16262,0
Invariant property MIN0 does not hold.

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MIN0,1,0.067327,6692,2,8,15,17308,8,0,46,16262,0
[2025-05-29 23:15:43] [INFO ] Deduced a trap along path composed of 2 places in 29 ms of which 8 ms to minimize.
Problem MAX0 is UNSAT
After SMT solving in domain Real declared 17/17 variables, and 11 constraints, problems are : Problem set: 1 solved, 0 unsolved in 78 ms.
Refiners :[Positive P Invariants (semi-flows): 2/2 constraints, State Equation: 7/7 constraints, ReadFeed: 1/1 constraints, PredecessorRefiner: 1/1 constraints, Known Traps: 0/0 constraints, Known Traps Along Path: 1/1 constraints]
After SMT, in 81ms problems are : Problem set: 1 solved, 0 unsolved
Skipping Parikh replay, no witness traces provided.
Current structural bounds on expressions (After reachability solving 0 queries.) : Max Seen:[8] Max Struct:[20]
Ending property specific reduction for Angiogenesis-PT-20-UpperBounds-04 in 853 ms.
[2025-05-29 23:15:43] [INFO ] Flatten gal took : 6 ms
[2025-05-29 23:15:43] [INFO ] Applying decomposition
[2025-05-29 23:15:43] [INFO ] Flatten gal took : 2 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/convert-linux64' '-i' '/tmp/graph7829215004705694868.txt' '-o' '/tmp/graph7829215004705694868.bin' '-w' '/tmp/graph7829215004705694868.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202505121319/bin/louvain-linux64' '/tmp/graph7829215004705694868.bin' '-l' '-1' '-v' '-w' '/tmp/graph7829215004705694868.weights' '-q' '0' '-e' '0.001'
[2025-05-29 23:15:43] [INFO ] Decomposing Gal with order
[2025-05-29 23:15:43] [INFO ] Rewriting arrays to variables to allow decomposition.
[2025-05-29 23:15:43] [INFO ] Flatten gal took : 26 ms
[2025-05-29 23:15:43] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 1 ms.
[2025-05-29 23:15:43] [INFO ] Time to serialize gal into /tmp/UpperBounds7812757767507712870.gal : 2 ms
[2025-05-29 23:15:43] [INFO ] Time to serialize properties into /tmp/UpperBounds899896423203540908.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/UpperBounds7812757767507712870.gal' '-t' 'CGAL' '-reachable-file' '/tmp/UpperBounds899896423203540908.prop' '--nowitness'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202505121319/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...282
Loading property file /tmp/UpperBounds899896423203540908.prop.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst\_mod\_flat,93864,0.03642,5632,335,295,2256,1230,48,5909,23,7130,0
Total reachable state count : 93864

Verifying 1 reachability properties.
Min sum of variable value : 0
Maximum sum along a path : 19
Bounds property Angiogenesis-PT-20-UpperBounds-04 :0 <= u1.KdStarGP3 <= 19
FORMULA Angiogenesis-PT-20-UpperBounds-04 19 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
Angiogenesis-PT-20-UpperBounds-04,0,0.066565,7168,1,0,2256,2531,68,18808,51,22806,121
Total runtime 5812 ms.

BK_STOP 1748560543994

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ UpperBounds = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202505121319.jar
+ VERSION=202505121319
+ echo 'Running Version 202505121319'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination UpperBounds -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-20"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5832"
echo " Executing tool itstools"
echo " Input is Angiogenesis-PT-20, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r002-tall-174853728900253"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-20.tgz
mv Angiogenesis-PT-20 execution
cd execution
if [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "UpperBounds" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] || [ "UpperBounds" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] ; then
echo "FORMULA_NAME UpperBounds"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;