Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r628-smll-171774445900038.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is ResIsolation-PT-N08P5, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r628-smll-171774445900038
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 97M
-rw-r--r-- 1 mcc users 6.2K Jun 7 06:38 CTLCardinality.txt
-rw-r--r-- 1 mcc users 63K Jun 7 06:38 CTLCardinality.xml
-rw-r--r-- 1 mcc users 4.2K Jun 7 06:38 CTLFireability.txt
-rw-r--r-- 1 mcc users 30K Jun 7 06:38 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.8K Jun 7 06:44 LTLCardinality.txt
-rw-r--r-- 1 mcc users 28K Jun 7 06:44 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K Jun 7 06:44 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Jun 7 06:44 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 Jun 7 06:26 NewModel
-rw-r--r-- 1 mcc users 11K Jun 7 06:39 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 112K Jun 7 06:39 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.3K Jun 7 06:39 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 66K Jun 7 06:39 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Jun 7 06:43 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Jun 7 06:43 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Jun 7 06:26 equiv_col
-rw-r--r-- 1 mcc users 6 Jun 7 06:26 instance
-rw-r--r-- 1 mcc users 6 Jun 7 06:26 iscolored
-rw-r--r-- 1 mcc users 97M Jun 7 06:26 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-00
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-01
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-02
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-03
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-04
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-05
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-06
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-07
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-08
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-09
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-10
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-11
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-12
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-13
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-14
FORMULA_NAME ResIsolation-PT-N08P5-ReachabilityCardinality-2024-15

=== Now, execution of the tool begins

BK_START 1717773003783

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=ResIsolation-PT-N08P5
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
ReachabilityCardinality PT
Running Version 202405141337
[2024-06-07 15:10:05] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-06-07 15:10:06] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-06-07 15:10:11] [INFO ] Load time of PNML (sax parser for PT used): 5529 ms
[2024-06-07 15:10:11] [INFO ] Transformed 426 places.
[2024-06-07 15:10:12] [INFO ] Transformed 74110 transitions.
[2024-06-07 15:10:12] [INFO ] Found NUPN structural information;
[2024-06-07 15:10:12] [INFO ] Parsed PT model containing 426 places and 74110 transitions and 1917704 arcs in 6495 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityCardinality.xml in 35 ms.
Working with output stream class java.io.PrintStream
FORMULA ResIsolation-PT-N08P5-ReachabilityCardinality-2024-01 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA ResIsolation-PT-N08P5-ReachabilityCardinality-2024-09 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA ResIsolation-PT-N08P5-ReachabilityCardinality-2024-12 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
RANDOM walk for 40000 steps (8 resets) in 101045 ms. (0 steps per ms) remains 12/13 properties
FORMULA ResIsolation-PT-N08P5-ReachabilityCardinality-2024-11 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
BEST_FIRST walk for 40004 steps (8 resets) in 8689 ms. (4 steps per ms) remains 12/12 properties
[2024-06-07 15:10:44] [INFO ] Flatten gal took : 26642 ms
BEST_FIRST walk for 40004 steps (8 resets) in 10581 ms. (3 steps per ms) remains 12/12 properties
BEST_FIRST walk for 39063 steps (8 resets) in 12621 ms. (3 steps per ms) remains 12/12 properties
BEST_FIRST walk for 40001 steps (8 resets) in 13963 ms. (2 steps per ms) remains 12/12 properties
BEST_FIRST walk for 40004 steps (8 resets) in 11424 ms. (3 steps per ms) remains 12/12 properties
BEST_FIRST walk for 40003 steps (8 resets) in 12010 ms. (3 steps per ms) remains 12/12 properties
[2024-06-07 15:11:04] [INFO ] Flatten gal took : 19645 ms
BEST_FIRST walk for 40004 steps (8 resets) in 12026 ms. (3 steps per ms) remains 11/12 properties
FORMULA ResIsolation-PT-N08P5-ReachabilityCardinality-2024-15 FALSE TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
[2024-06-07 15:11:06] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality7908724660512677856.gal : 2419 ms
[2024-06-07 15:11:06] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality6950635933192354796.prop : 15 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality7908724660512677856.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality6950635933192354796.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...328
BEST_FIRST walk for 40003 steps (8 resets) in 9696 ms. (4 steps per ms) remains 11/11 properties
BEST_FIRST walk for 40004 steps (8 resets) in 6921 ms. (5 steps per ms) remains 11/11 properties
BEST_FIRST walk for 40004 steps (8 resets) in 11281 ms. (3 steps per ms) remains 11/11 properties
BEST_FIRST walk for 40004 steps (8 resets) in 10538 ms. (3 steps per ms) remains 11/11 properties
// Phase 1: matrix 74110 rows 426 cols
[2024-06-07 15:11:19] [INFO ] Computed 13 invariants in 2435 ms
All remaining problems are real, not stopping.
At refinement iteration 0 (INCLUDED_ONLY) 0/139 variables, 139/139 constraints. Problems are: Problem set: 0 solved, 11 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/139 variables, 0/139 constraints. Problems are: Problem set: 0 solved, 11 unsolved
At refinement iteration 2 (OVERLAPS) 287/426 variables, 13/152 constraints. Problems are: Problem set: 0 solved, 11 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/426 variables, 287/439 constraints. Problems are: Problem set: 0 solved, 11 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/426 variables, 0/439 constraints. Problems are: Problem set: 0 solved, 11 unsolved
SMT process timed out in 9097ms, After SMT, problems are : Problem set: 0 solved, 11 unsolved
Skipping Parikh replay, no witness traces provided.
Support contains 139 out of 426 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 426/426 places, 74110/74110 transitions.
Graph (trivial) has 168 edges and 426 vertex of which 12 / 426 are part of one of the 4 SCC in 27 ms
Free SCC test removed 8 places
Drop transitions (Empty/Sink Transition effects.) removed 12 transitions
Reduce isomorphic transitions removed 12 transitions.
Graph (complete) has 5296 edges and 418 vertex of which 398 are kept as prefixes of interest. Removing 20 places using SCC suffix rule.778 ms
Discarding 20 places :
Also discarding 12 output transitions
Drop transitions (Output transitions of discarded places.) removed 12 transitions
Drop transitions (Empty/Sink Transition effects.) removed 2 transitions
Reduce isomorphic transitions removed 2 transitions.
Drop transitions (Trivial Post-Agglo cleanup.) removed 12 transitions
Trivial Post-agglo rules discarded 12 transitions
Performed 12 trivial Post agglomeration. Transition count delta: 12
Iterating post reduction 0 with 14 rules applied. Total rules applied 16 place count 398 transition count 74072
Reduce places removed 12 places and 0 transitions.
Performed 14 Post agglomeration using F-continuation condition.Transition count delta: 14
Iterating post reduction 1 with 26 rules applied. Total rules applied 42 place count 386 transition count 74058
Reduce places removed 14 places and 0 transitions.
Iterating post reduction 2 with 14 rules applied. Total rules applied 56 place count 372 transition count 74058
Performed 6 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 3 with 6 Pre rules applied. Total rules applied 56 place count 372 transition count 74052
Deduced a syphon composed of 6 places in 127 ms
Reduce places removed 6 places and 0 transitions.
Iterating global reduction 3 with 12 rules applied. Total rules applied 68 place count 366 transition count 74052
Discarding 117 places :
Symmetric choice reduction at 3 with 117 rule applications. Total rules 185 place count 249 transition count 73935
Iterating global reduction 3 with 117 rules applied. Total rules applied 302 place count 249 transition count 73935
ITS-tools command line returned an error code 137
Performed 14 Post agglomeration using F-continuation condition.
[2024-06-07 15:12:17] [INFO ] Flatten gal took : 16569 ms
[2024-06-07 15:12:17] [INFO ] Applying decomposition
Performed 17 Post agglomeration using F-continuation condition.Transition count delta: 17
Deduced a syphon composed of 17 places in 99 ms
Reduce places removed 17 places and 0 transitions.
Iterating global reduction 3 with 34 rules applied. Total rules applied 336 place count 232 transition count 73918
[2024-06-07 15:12:32] [INFO ] Flatten gal took : 15179 ms
Free-agglomeration rule applied 20 times.
Iterating global reduction 3 with 20 rules applied. Total rules applied 356 place count 232 transition count 73898
Reduce places removed 20 places and 0 transitions.
Iterating post reduction 3 with 20 rules applied. Total rules applied 376 place count 212 transition count 73898
Partial Free-agglomeration rule applied 1 times.
Drop transitions (Partial Free agglomeration) removed 1 transitions
Iterating global reduction 4 with 1 rules applied. Total rules applied 377 place count 212 transition count 73898
Applied a total of 377 rules in 76223 ms. Remains 212 /426 variables (removed 214) and now considering 73898/74110 (removed 212) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 76291 ms. Remains : 212/426 places, 73898/74110 transitions.
RANDOM walk for 40000 steps (9 resets) in 78136 ms. (0 steps per ms) remains 11/11 properties
BEST_FIRST walk for 40004 steps (8 resets) in 9809 ms. (4 steps per ms) remains 11/11 properties
BEST_FIRST walk for 24577 steps (4 resets) in 19275 ms. (1 steps per ms) remains 11/11 properties
BEST_FIRST walk for 21846 steps (5 resets) in 20020 ms. (1 steps per ms) remains 11/11 properties
BEST_FIRST walk for 33071 steps (7 resets) in 19394 ms. (1 steps per ms) remains 11/11 properties
BEST_FIRST walk for 36592 steps (7 resets) in 15851 ms. (2 steps per ms) remains 11/11 properties
BEST_FIRST walk for 30960 steps (6 resets) in 18230 ms. (1 steps per ms) remains 11/11 properties
[2024-06-07 15:13:34] [WARNING] Could not apply decomposition. Using flat GAL structure.
java.util.concurrent.TimeoutException: Subprocess running '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/convert-linux64' '-i' '/tmp/graph487625307661735750.txt' '-o' '/tmp/graph487625307661735750.bin' '-w' '/tmp/graph487625307661735750.weights' killed by timeout after 10 SECONDS
at fr.lip6.move.gal.process.Runner.waitForOrTimeout(Runner.java:76)
at fr.lip6.move.gal.process.Runner.runTool(Runner.java:47)
at fr.lip6.move.gal.process.Runner.runTool(Runner.java:27)
at fr.lip6.move.gal.louvain.GraphBuilder.convertGraphToBin(GraphBuilder.java:258)
at fr.lip6.move.gal.louvain.GraphBuilder.computeLouvain(GraphBuilder.java:189)
at fr.lip6.move.gal.louvain.GraphBuilder.computeLouvain(GraphBuilder.java:157)
at fr.lip6.move.gal.application.mcc.MccTranslator.applyOrder(MccTranslator.java:114)
at fr.lip6.move.gal.application.mcc.MccTranslator.flattenSpec(MccTranslator.java:230)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.verifyWithSDD(GlobalPropertySolver.java:719)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.lambda$2(ReachabilitySolver.java:71)
at java.base/java.lang.Thread.run(Thread.java:840)
BEST_FIRST walk for 14988 steps (2 resets) in 20010 ms. (0 steps per ms) remains 11/11 properties
BEST_FIRST walk for 36488 steps (10 resets) in 17205 ms. (2 steps per ms) remains 11/11 properties
BEST_FIRST walk for 40002 steps (8 resets) in 11739 ms. (3 steps per ms) remains 11/11 properties
BEST_FIRST walk for 30030 steps (7 resets) in 19047 ms. (1 steps per ms) remains 11/11 properties
BEST_FIRST walk for 38809 steps (8 resets) in 16274 ms. (2 steps per ms) remains 11/11 properties
[2024-06-07 15:13:54] [INFO ] Flatten gal took : 19795 ms
[2024-06-07 15:13:56] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality10890795472179624439.gal : 2097 ms
[2024-06-07 15:13:56] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality9186735886781026438.prop : 2 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality10890795472179624439.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality9186735886781026438.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329

BK_STOP 1717773247393

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ResIsolation-PT-N08P5"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is ResIsolation-PT-N08P5, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r628-smll-171774445900038"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ResIsolation-PT-N08P5.tgz
mv ResIsolation-PT-N08P5 execution
cd execution
if [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "UpperBounds" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] || [ "ReachabilityCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;