Execution Chart

Sorry, for this execution, no execution chart could be reported.

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r602-tall-171774424700224.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is BlocksWorld-PT-08, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r602-tall-171774424700224
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 31M
-rw-r--r-- 1 mcc users 622K Jun 7 06:38 CTLCardinality.txt
-rw-r--r-- 1 mcc users 2.9M Jun 7 06:38 CTLCardinality.xml
-rw-r--r-- 1 mcc users 610K Jun 7 06:38 CTLFireability.txt
-rw-r--r-- 1 mcc users 3.3M Jun 7 06:38 CTLFireability.xml
-rw-r--r-- 1 mcc users 28K Jun 7 06:44 LTLCardinality.txt
-rw-r--r-- 1 mcc users 95K Jun 7 06:44 LTLCardinality.xml
-rw-r--r-- 1 mcc users 446K Jun 7 06:44 LTLFireability.txt
-rw-r--r-- 1 mcc users 1.8M Jun 7 06:44 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 Jun 7 06:26 NewModel
-rw-r--r-- 1 mcc users 1.4M Jun 7 06:39 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 5.8M Jun 7 06:39 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.0M Jun 7 06:39 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 11M Jun 7 06:39 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 31K Jun 7 06:43 UpperBounds.txt
-rw-r--r-- 1 mcc users 74K Jun 7 06:43 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Jun 7 06:26 equiv_col
-rw-r--r-- 1 mcc users 3 Jun 7 06:26 instance
-rw-r--r-- 1 mcc users 6 Jun 7 06:26 iscolored
-rw-r--r-- 1 mcc users 1.9M Jun 7 06:26 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1717761285334

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=BlocksWorld-PT-08
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202405141337
[2024-06-07 11:54:46] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-06-07 11:54:46] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-06-07 11:54:46] [INFO ] Load time of PNML (sax parser for PT used): 236 ms
[2024-06-07 11:54:46] [INFO ] Transformed 1979 places.
[2024-06-07 11:54:46] [INFO ] Transformed 3785 transitions.
[2024-06-07 11:54:46] [INFO ] Found NUPN structural information;
[2024-06-07 11:54:46] [INFO ] Completing missing partition info from NUPN : creating a component with [pred_on_table_0, pred_arm_empty_0, pred_on_table_1, pred_on_table_2, pred_on_table_3, pred_on_table_4, pred_on_table_5, pred_on_table_6, pred_on_table_7, pred_on_table_8, pred_on_table_9, pred_on_table_10, pred_on_table_11, pred_on_table_12, pred_on_table_13, pred_on_table_14, pred_on_table_15, pred_on_table_16, pred_on_table_17, pred_on_table_18, pred_on_table_19, pred_on_table_20, pred_on_table_21, pred_on_table_22, pred_on_table_23, pred_on_table_24, pred_on_table_25, pred_on_table_26, pred_on_table_27, pred_on_table_28, pred_on_table_29, pred_on_table_30, pred_on_table_31, pred_on_table_32, pred_on_table_33, pred_on_table_34, pred_on_table_35, pred_on_table_36, pred_on_table_37, pred_on_table_38, pred_on_table_39, pred_on_table_40, pred_on_table_41, pred_on_table_42]
[2024-06-07 11:54:46] [INFO ] Parsed PT model containing 1979 places and 3785 transitions and 18910 arcs in 365 ms.
Reduce redundant transitions removed 1 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 1979/1979 places, 3784/3784 transitions.
[2024-06-07 11:54:47] [INFO ] Redundant transitions in 225 ms returned []
Running 3778 sub problems to find dead transitions.
// Phase 1: matrix 3784 rows 1979 cols
[2024-06-07 11:54:47] [INFO ] Computed 87 invariants in 70 ms
[2024-06-07 11:54:47] [INFO ] State equation strengthened by 74 read => feed constraints.
Problem TDEAD1 is UNSAT
Problem TDEAD44 is UNSAT
Problem TDEAD130 is UNSAT
Problem TDEAD174 is UNSAT
Problem TDEAD218 is UNSAT
Problem TDEAD262 is UNSAT
Problem TDEAD306 is UNSAT
Problem TDEAD350 is UNSAT
Problem TDEAD394 is UNSAT
Problem TDEAD438 is UNSAT
Problem TDEAD482 is UNSAT
Problem TDEAD526 is UNSAT
Problem TDEAD570 is UNSAT
Problem TDEAD614 is UNSAT
Problem TDEAD658 is UNSAT
Problem TDEAD746 is UNSAT
Problem TDEAD790 is UNSAT
Problem TDEAD834 is UNSAT
Problem TDEAD878 is UNSAT
Problem TDEAD922 is UNSAT
Problem TDEAD966 is UNSAT
Problem TDEAD1010 is UNSAT
Problem TDEAD1054 is UNSAT
Problem TDEAD1142 is UNSAT
Problem TDEAD1186 is UNSAT
Problem TDEAD1230 is UNSAT
Problem TDEAD1274 is UNSAT
Problem TDEAD1318 is UNSAT
Problem TDEAD1362 is UNSAT
Problem TDEAD1406 is UNSAT
Problem TDEAD1450 is UNSAT
Problem TDEAD1538 is UNSAT
Problem TDEAD1582 is UNSAT
Problem TDEAD1626 is UNSAT
Problem TDEAD1670 is UNSAT
Problem TDEAD1714 is UNSAT
Problem TDEAD1758 is UNSAT
Problem TDEAD1802 is UNSAT
Problem TDEAD1846 is UNSAT
Problem TDEAD1890 is UNSAT
Problem TDEAD1978 is UNSAT
Problem TDEAD2062 is UNSAT
Problem TDEAD2144 is UNSAT
Problem TDEAD2224 is UNSAT
Problem TDEAD2302 is UNSAT
Problem TDEAD2378 is UNSAT
Problem TDEAD2452 is UNSAT
Problem TDEAD2524 is UNSAT
Problem TDEAD2594 is UNSAT
Problem TDEAD2662 is UNSAT
Problem TDEAD2728 is UNSAT
Problem TDEAD2792 is UNSAT
Problem TDEAD2854 is UNSAT
Problem TDEAD2972 is UNSAT
Problem TDEAD3028 is UNSAT
Problem TDEAD3082 is UNSAT
Problem TDEAD3134 is UNSAT
Problem TDEAD3184 is UNSAT
Problem TDEAD3232 is UNSAT
Problem TDEAD3278 is UNSAT
Problem TDEAD3322 is UNSAT
Problem TDEAD3404 is UNSAT
Problem TDEAD3442 is UNSAT
Problem TDEAD3478 is UNSAT
Problem TDEAD3512 is UNSAT
Problem TDEAD3544 is UNSAT
Problem TDEAD3574 is UNSAT
Problem TDEAD3602 is UNSAT
Problem TDEAD3628 is UNSAT
Problem TDEAD3674 is UNSAT
Problem TDEAD3694 is UNSAT
Problem TDEAD3712 is UNSAT
Problem TDEAD3728 is UNSAT
Problem TDEAD3742 is UNSAT
Problem TDEAD3754 is UNSAT
Problem TDEAD3764 is UNSAT
Problem TDEAD3772 is UNSAT
Problem TDEAD3778 is UNSAT
At refinement iteration 0 (INCLUDED_ONLY) 0/1973 variables, 77/77 constraints. Problems are: Problem set: 78 solved, 3700 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 1973/5763 variables, and 77 constraints, problems are : Problem set: 78 solved, 3700 unsolved in 30105 ms.
Refiners :[Positive P Invariants (semi-flows): 77/87 constraints, State Equation: 0/1979 constraints, ReadFeed: 0/74 constraints, PredecessorRefiner: 3739/1892 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 78 solved, 3700 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/1934 variables, 5/5 constraints. Problems are: Problem set: 78 solved, 3700 unsolved
Error getting values : (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 1934/5763 variables, and 5 constraints, problems are : Problem set: 78 solved, 3700 unsolved in 30051 ms.
Refiners :[Positive P Invariants (semi-flows): 5/87 constraints, State Equation: 0/1979 constraints, ReadFeed: 0/74 constraints, PredecessorRefiner: 1847/1892 constraints, Known Traps: 0/0 constraints]
After SMT, in 90371ms problems are : Problem set: 78 solved, 3700 unsolved
Search for dead transitions found 78 dead transitions in 90450ms
Found 78 dead transitions using SMT.
Drop transitions (Dead Transitions using SMT only with invariants) removed 78 transitions
Dead transitions reduction (with SMT) removed 78 transitions
Starting structural reductions in STATESPACE mode, iteration 1 : 1979/1979 places, 3706/3784 transitions.
Reduce places removed 39 places and 0 transitions.
Starting structural reductions in STATESPACE mode, iteration 2 : 1940/1979 places, 3706/3784 transitions.
Finished structural reductions in STATESPACE mode , in 2 iterations and 91495 ms. Remains : 1940/1979 places, 3706/3784 transitions.
Final net has 1940 places and 3706 transitions.
[2024-06-07 11:56:18] [INFO ] Flatten gal took : 348 ms
[2024-06-07 11:56:19] [INFO ] Applying decomposition
[2024-06-07 11:56:19] [INFO ] Flatten gal took : 180 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/convert-linux64' '-i' '/tmp/graph13787068228307766996.txt' '-o' '/tmp/graph13787068228307766996.bin' '-w' '/tmp/graph13787068228307766996.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/louvain-linux64' '/tmp/graph13787068228307766996.bin' '-l' '-1' '-v' '-w' '/tmp/graph13787068228307766996.weights' '-q' '0' '-e' '0.001'
[2024-06-07 11:56:19] [INFO ] Decomposing Gal with order
[2024-06-07 11:56:19] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-06-07 11:56:20] [INFO ] Removed a total of 6972 redundant transitions.
[2024-06-07 11:56:20] [INFO ] Flatten gal took : 820 ms
[2024-06-07 11:56:21] [INFO ] Fuse similar labels procedure discarded/fused a total of 110 labels/synchronizations in 97 ms.
[2024-06-07 11:56:21] [INFO ] Time to serialize gal into /tmp/StateSpace14372333213322303306.gal : 58 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace14372333213322303306.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...220
ITS-tools command line returned an error code 137
[2024-06-07 12:02:34] [INFO ] Applying decomposition
[2024-06-07 12:02:34] [INFO ] Flatten gal took : 309 ms
[2024-06-07 12:02:35] [INFO ] Decomposing Gal with order
[2024-06-07 12:02:35] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-06-07 12:02:35] [INFO ] Removed a total of 7230 redundant transitions.
[2024-06-07 12:02:35] [INFO ] Flatten gal took : 620 ms
[2024-06-07 12:02:35] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 32 ms.
[2024-06-07 12:02:36] [INFO ] Time to serialize gal into /tmp/StateSpace8855234135321783946.gal : 65 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace8855234135321783946.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Detected timeout of ITS tools.
[2024-06-07 12:23:06] [INFO ] Flatten gal took : 142 ms
[2024-06-07 12:23:07] [INFO ] Input system was already deterministic with 3706 transitions.
[2024-06-07 12:23:07] [INFO ] Transformed 1940 places.
[2024-06-07 12:23:07] [INFO ] Transformed 3706 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2024-06-07 12:23:07] [INFO ] Time to serialize gal into /tmp/StateSpace8519621939708693504.gal : 22 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace8519621939708693504.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...285
Successfully loaded order from file /home/mcc/execution/model.ord
ITS-tools command line returned an error code 137
Total runtime 2091766 ms.

BK_STOP 1717763378364

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="BlocksWorld-PT-08"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is BlocksWorld-PT-08, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r602-tall-171774424700224"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/BlocksWorld-PT-08.tgz
mv BlocksWorld-PT-08 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;