Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r453-smll-171701118800187.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is ViralEpidemic-PT-S02D1C1A10, examination is QuasiLiveness
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r453-smll-171701118800187
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 9.3M
-rw-r--r-- 1 mcc users 12K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 98K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.7K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 48K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:43 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.9K May 19 07:18 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K May 19 16:46 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.9K May 19 07:39 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 19 19:30 LTLFireability.xml
-rw-r--r-- 1 mcc users 15K Apr 12 05:02 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 113K Apr 12 05:02 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 13K Apr 12 04:52 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 87K Apr 12 04:52 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.0K Apr 23 08:04 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K Apr 23 08:04 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:43 equiv_col
-rw-r--r-- 1 mcc users 11 May 18 16:43 instance
-rw-r--r-- 1 mcc users 6 May 18 16:43 iscolored
-rw-r--r-- 1 mcc users 8.8M May 18 16:43 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME QuasiLiveness

=== Now, execution of the tool begins

BK_START 1717160603907

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=QuasiLiveness
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=ViralEpidemic-PT-S02D1C1A10
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
QuasiLiveness PT
Running Version 202405141337
[2024-05-31 13:03:26] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, QuasiLiveness, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2024-05-31 13:03:26] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-31 13:03:27] [INFO ] Load time of PNML (sax parser for PT used): 1024 ms
[2024-05-31 13:03:27] [INFO ] Transformed 8189 places.
[2024-05-31 13:03:27] [INFO ] Transformed 10235 transitions.
[2024-05-31 13:03:27] [INFO ] Found NUPN structural information;
[2024-05-31 13:03:27] [INFO ] Parsed PT model containing 8189 places and 10235 transitions and 22517 arcs in 1346 ms.
Starting structural reductions in LIVENESS mode, iteration 0 : 8189/8189 places, 10235/10235 transitions.
Applied a total of 0 rules in 180 ms. Remains 8189 /8189 variables (removed 0) and now considering 10235/10235 (removed 0) transitions.
// Phase 1: matrix 10235 rows 8189 cols
[2024-05-31 13:03:29] [INFO ] Invariants computation overflowed in 1744 ms
[2024-05-31 13:03:39] [INFO ] Implicit Places using invariants in 11583 ms returned []
Implicit Place search using SMT only with invariants took 11630 ms to find 0 implicit places.
Running 10234 sub problems to find dead transitions.
// Phase 1: matrix 10235 rows 8189 cols
[2024-05-31 13:03:41] [INFO ] Invariants computation overflowed in 1350 ms
(s1063 1.0timeout
^^^^^^^^^^
(error "Invalid token: 1.0timeout")
Error getting values : (error "ParserException while parsing response: ((s0 1.0)
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org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
At refinement iteration 0 (INCLUDED_ONLY) 0/8188 variables, 8188/8188 constraints. Problems are: Problem set: 0 solved, 10234 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 8188/18424 variables, and 8188 constraints, problems are : Problem set: 0 solved, 10234 unsolved in 30430 ms.
Refiners :[Domain max(s): 8188/8189 constraints, State Equation: 0/8189 constraints, PredecessorRefiner: 10234/10234 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 10234 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/8188 variables, 8188/8188 constraints. Problems are: Problem set: 0 solved, 10234 unsolved
Error getting values : (error "ParserException while parsing response: ((s0 1)
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(s2323 timeout
1 org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 8188/18424 variables, and 8188 constraints, problems are : Problem set: 0 solved, 10234 unsolved in 30246 ms.
Refiners :[Domain max(s): 8188/8189 constraints, State Equation: 0/8189 constraints, PredecessorRefiner: 0/10234 constraints, Known Traps: 0/0 constraints]
After SMT, in 72322ms problems are : Problem set: 0 solved, 10234 unsolved
Search for dead transitions found 0 dead transitions in 72675ms
Finished structural reductions in LIVENESS mode , in 1 iterations and 84627 ms. Remains : 8189/8189 places, 10235/10235 transitions.
Discarding 2046 transitions out of 10235. Remains 8189
Initial state reduction rules removed 1 formulas.
[2024-05-31 13:04:55] [INFO ] Flatten gal took : 1690 ms
[2024-05-31 13:04:56] [INFO ] Flatten gal took : 591 ms
[2024-05-31 13:04:56] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality17625457618532953715.gal : 266 ms
[2024-05-31 13:04:56] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality627155130976305373.prop : 108 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality17625457618532953715.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality627155130976305373.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...328
Loading property file /tmp/ReachabilityCardinality627155130976305373.prop.
RANDOM walk for 40000 steps (3885 resets) in 111070 ms. (0 steps per ms) remains 4268/8188 properties
BEST_FIRST walk for 124 steps (8 resets) in 87 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 105 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 87 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 199 ms. (0 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 150 ms. (0 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 78 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 100 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 56 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 69 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 57 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 54 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 53 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 53 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 54 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 66 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 74 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 81 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 79 ms. (1 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 38 ms. (3 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 45 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 40 ms. (3 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 39 ms. (3 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 45 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 47 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 39 ms. (3 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 47 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 36 ms. (3 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 36 ms. (3 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 49 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 39 ms. (3 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 50 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 42 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 46 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 49 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 47 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 39 ms. (3 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 46 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 48 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 46 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 45 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 46 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 44 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 45 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 49 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 37 ms. (3 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 53 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 58 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 59 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 50 ms. (2 steps per ms) remains 4268/4268 properties
BEST_FIRST walk for 124 steps (8 resets) in 60 ms. (2 steps per ms) remains 4268/4268 properties
// Phase 1: matrix 10235 rows 8189 cols
[2024-05-31 13:05:23] [INFO ] Invariants computation overflowed in 988 ms
At refinement iteration 0 (INCLUDED_ONLY) 0/4268 variables, 4268/4268 constraints. Problems are: Problem set: 0 solved, 4268 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 4268/18424 variables, and 4268 constraints, problems are : Problem set: 0 solved, 4268 unsolved in 5181 ms.
Refiners :[Domain max(s): 4268/8189 constraints, State Equation: 0/8189 constraints, PredecessorRefiner: 4268/4268 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 4268 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/4268 variables, 4268/4268 constraints. Problems are: Problem set: 0 solved, 4268 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 4268/18424 variables, and 4268 constraints, problems are : Problem set: 0 solved, 4268 unsolved in 5103 ms.
Refiners :[Domain max(s): 4268/8189 constraints, State Equation: 0/8189 constraints, PredecessorRefiner: 0/4268 constraints, Known Traps: 0/0 constraints]
After SMT, in 15903ms problems are : Problem set: 0 solved, 4268 unsolved
Skipping Parikh replay, no witness traces provided.
Support contains 4268 out of 8189 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 8189/8189 places, 10235/10235 transitions.
Graph (complete) has 4094 edges and 8189 vertex of which 5407 are kept as prefixes of interest. Removing 2782 places using SCC suffix rule.20 ms
Discarding 2782 places :
Also discarding 1958 output transitions
Drop transitions (Output transitions of discarded places.) removed 1958 transitions
Drop transitions (Empty/Sink Transition effects.) removed 2276 transitions
Reduce isomorphic transitions removed 2276 transitions.
Drop transitions (Trivial Post-Agglo cleanup.) removed 36 transitions
Trivial Post-agglo rules discarded 36 transitions
Performed 36 trivial Post agglomeration. Transition count delta: 36
Iterating post reduction 0 with 2312 rules applied. Total rules applied 2313 place count 5407 transition count 5965
Reduce places removed 36 places and 0 transitions.
Iterating post reduction 1 with 36 rules applied. Total rules applied 2349 place count 5371 transition count 5965
Performed 158 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 2 with 158 Pre rules applied. Total rules applied 2349 place count 5371 transition count 5807
Deduced a syphon composed of 158 places in 5 ms
Reduce places removed 158 places and 0 transitions.
Iterating global reduction 2 with 316 rules applied. Total rules applied 2665 place count 5213 transition count 5807
Performed 471 Post agglomeration using F-continuation condition.Transition count delta: 471
Deduced a syphon composed of 471 places in 16 ms
Reduce places removed 471 places and 0 transitions.
Iterating global reduction 2 with 942 rules applied. Total rules applied 3607 place count 4742 transition count 5336
Renaming transitions due to excessive name length > 1024 char.
Reduce places removed 1 places and 1 transitions.
Iterating global reduction 2 with 1 rules applied. Total rules applied 3608 place count 4741 transition count 5335
Applied a total of 3608 rules in 1529 ms. Remains 4741 /8189 variables (removed 3448) and now considering 5335/10235 (removed 4900) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 1531 ms. Remains : 4741/8189 places, 5335/10235 transitions.
RANDOM walk for 250840 steps (136 resets) in 59308 ms. (4 steps per ms) remains 0/4268 properties
ITS runner timed out or was interrupted.
ITS tools runner thread asked to quit. Dying gracefully.
Able to resolve query QuasiLiveness after proving 8189 properties.
FORMULA QuasiLiveness TRUE TECHNIQUES RANDOM_WALK TOPOLOGICAL INITIAL_STATE
Total runtime 149892 ms.

BK_STOP 1717160756171

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ QuasiLiveness = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution QuasiLiveness -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination QuasiLiveness -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S02D1C1A10"
export BK_EXAMINATION="QuasiLiveness"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is ViralEpidemic-PT-S02D1C1A10, examination is QuasiLiveness"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r453-smll-171701118800187"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S02D1C1A10.tgz
mv ViralEpidemic-PT-S02D1C1A10 execution
cd execution
if [ "QuasiLiveness" = "ReachabilityDeadlock" ] || [ "QuasiLiveness" = "UpperBounds" ] || [ "QuasiLiveness" = "QuasiLiveness" ] || [ "QuasiLiveness" = "StableMarking" ] || [ "QuasiLiveness" = "Liveness" ] || [ "QuasiLiveness" = "OneSafe" ] || [ "QuasiLiveness" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "QuasiLiveness" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "QuasiLiveness" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "QuasiLiveness.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property QuasiLiveness.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "QuasiLiveness.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' QuasiLiveness.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "QuasiLiveness" = "ReachabilityDeadlock" ] || [ "QuasiLiveness" = "QuasiLiveness" ] || [ "QuasiLiveness" = "StableMarking" ] || [ "QuasiLiveness" = "Liveness" ] || [ "QuasiLiveness" = "OneSafe" ] ; then
echo "FORMULA_NAME QuasiLiveness"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;