Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r444-smll-171701111400384.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is ViralEpidemic-PT-S08D1C2A02, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r444-smll-171701111400384
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 912K
-rw-r--r-- 1 mcc users 9.3K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 91K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.2K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 53K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:43 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.4K Apr 23 08:04 LTLCardinality.txt
-rw-r--r-- 1 mcc users 29K Apr 23 08:04 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.5K May 19 07:40 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 19 19:31 LTLFireability.xml
-rw-r--r-- 1 mcc users 16K Apr 12 04:11 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 147K Apr 12 04:11 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 9.9K Apr 12 04:10 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 76K Apr 12 04:10 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Apr 23 08:04 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K Apr 23 08:04 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:43 equiv_col
-rw-r--r-- 1 mcc users 11 May 18 16:43 instance
-rw-r--r-- 1 mcc users 6 May 18 16:43 iscolored
-rw-r--r-- 1 mcc users 400K May 18 16:43 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1717201210085

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=ViralEpidemic-PT-S08D1C2A02
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202405141337
[2024-06-01 00:20:11] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-06-01 00:20:11] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-06-01 00:20:12] [INFO ] Load time of PNML (sax parser for PT used): 256 ms
[2024-06-01 00:20:12] [INFO ] Transformed 731 places.
[2024-06-01 00:20:12] [INFO ] Transformed 1241 transitions.
[2024-06-01 00:20:12] [INFO ] Parsed PT model containing 731 places and 1241 transitions and 2993 arcs in 494 ms.
Starting structural reductions in STATESPACE mode, iteration 0 : 731/731 places, 1241/1241 transitions.
[2024-06-01 00:20:12] [INFO ] Redundant transitions in 92 ms returned []
Running 1240 sub problems to find dead transitions.
// Phase 1: matrix 1241 rows 731 cols
[2024-06-01 00:20:12] [INFO ] Computed 1 invariants in 86 ms
Error getting values : (error "ParserException while parsing response: ((s0 1.0)
(s2 1.0)
(s3 1.0)
(s4 1.0)
(s5 1.0)
(s6 1.0)
(s7 1.0)
(s8 1.0)
(s9 1.0)
(s10 1.0)
(s11 1.0)
(s12 1.0)
(s13 1.0)
(s14 1.0)
(s15 1.0)
(s16 1.0)
(s17 1.0)
(s18 1.0)
(s19 1.0)
(s20 1.0)
(s21 1.0)
(s22 1.0)
(s23 1.0)
(s24 1.0)
(s25 1.0)
(s26 1.0)
(s27 1.0)
(s28 1.0)
(s29 1.0)
(s30 1.0)
(s31 1.0)
(s32 1.0)
(s33 1.0)
(s34 1.0)
(s35 1.0)
(s36 1.0)
(s37 1.0)
(s38 1.0)
(s39 1.0)
(s40 1.0)
(s41 1.0)
(s42 1.0)
(s43 1.0)
(s44 1.0)
(s45 1.0)
(s46 1.0)
(s47 1.0)
(s48 1.0)
(s49 1.0)
(s50 1.0)
(s51 1.0)
(s52 1.0)
(s53 1.0)
(s54 1.0)
(s55 1.0)
(s56 1.0)
(s57 1.0)
(s58 1.0)
(s59 1.0)
(s60 1.0)
(s61 1.0)
(s62 1.0)
(s63 1.0)
(s64 1.0)
(s65 1.0)
(s66 1.0)
(s67 1.0)
(s68 1.0)
(s69 1.0)
(s70 1.0)
(s71 1.0)
(s72 1.0)
(s73 1.0)
(s74 1.0)
(s75 1.0)
(s76 1.0)
(s77 1.0)
(s78 1.0)
(s79 1.0)
(s80 1.0)
(s81 1.0)
(s82 1.0)
(s83 1.0)
(s84 1.0)
(s85 1.0)
(s86 1.0)
(s87 1.0)
(s88 1.0)
(s89 1.0)
(s90 1.0)
(s91 1.0)
(s92 1.0)
(s93 1.0)
(s94 1.0)
(s95 1.0)
(s96 1.0)
(s97 1.0)
(s98 1.0)
(s99 1.0)
(s100 1.0)
(s101 1.0)
(s102 1.0)
(s103 1.0)
(s104 1.0)
(s105 1.0)
(s106 1.0)
(s107 1.0)
(s108 1.0)
(s109 1.0)
(s110 1.0)
(s111 1.0)
(s112 1.0)
(s113 1.0)
(s114 1.0)
(s115 1.0)
(s116 1.0)
(s117 1.0)
(s118 1.0)
(s119 1.0)
(s120 1.0)
(s121 1.0)
(s122 1.0)
(s123 1.0)
(s124 1.0)
(s125 1.0)
(s126 1.0)
(s127 1.0)
(s128 1.0)
(s129 1.0)
(s130 1.0)
(s131 1.0)
(s132 1.0)
(s133 1.0)
(s134 1.0)
(s135 1.0)
(s136 1.0)
(s137 1.0)
(s138 1.0)
(s139 1.0)
(s140 1.0)
(s141 1.0)
(s142 1.0)
(s143 1.0)
(s144 1.0)
(s145 1.0)
(s146 1.0)
(s147 1.0)
(s148 1.0)
(s149 1.0)
(s150 1.0)
(s151 1.0)
(s152 1.0)
(s153 1.0)
(s154 1.0)
(s155 1.0)
(s156 1.0)
(s157 1.0)
(s158 1.0)
(s159 1.0)
(s160 1.0)
(s161 1.0)
(s162 1.0)
(s163 1.0)
(s164 1.0)
(s165 1.0)
(s166 1.0)
(s167 1.0)
(s168 1.0)
(s169 1.0)
(s170 1.0)
(s171 1.0)
(s172 1.0)
(s173 1.0)
(s174 1.0)
(s175 1.0)
(s176 1.0)
(s177 1.0)
(s178 1.0)
(s179 1.0)
(s180 1.0)
(s181 1.0)
(s182 1.0)
(s183 1.0)
(s184 1.0)
(s185 1.0)
(s186 1.0)
(s187 1.0)
(s188 1.0)
(s189 1.0)
(s190 1.0)
(s191 1.0)
(s192 1.0)
(s193 1.0)
(s194 1.0)
(s195 1.0)
(s196 1.0)
(s197 1.0)
(s198 1.0)
(s199 1.0)
(s200 1.0)
(s201 1.0)
(s202 1.0)
(s203 1.0)
(s204 1.0)
(s205 1.0)
(s206 1.0)
(s207 1.0)
(s208 1.0)
(s209 1.0)
(s210 1.0)
(s211 1.0)
(s212 1.0)
(s213 1.0)
(s214 1.0)
(s215 1.0)
(s216 1.0)
(s217 1.0)
(s218 1.0)
(s219 1.0)
(s220 timeout
1.0 org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
At refinement iteration 0 (INCLUDED_ONLY) 0/730 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 1240 unsolved
SMT process timed out in 30903ms, After SMT, problems are : Problem set: 0 solved, 1240 unsolved
Search for dead transitions found 0 dead transitions in 30969ms
Finished structural reductions in STATESPACE mode , in 1 iterations and 31416 ms. Remains : 731/731 places, 1241/1241 transitions.
Final net has 731 places and 1241 transitions.
[2024-06-01 00:20:44] [INFO ] Flatten gal took : 228 ms
[2024-06-01 00:20:44] [INFO ] Applying decomposition
[2024-06-01 00:20:44] [INFO ] Flatten gal took : 128 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/convert-linux64' '-i' '/tmp/graph13204990320192209376.txt' '-o' '/tmp/graph13204990320192209376.bin' '-w' '/tmp/graph13204990320192209376.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/louvain-linux64' '/tmp/graph13204990320192209376.bin' '-l' '-1' '-v' '-w' '/tmp/graph13204990320192209376.weights' '-q' '0' '-e' '0.001'
[2024-06-01 00:20:44] [INFO ] Decomposing Gal with order
[2024-06-01 00:20:44] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-06-01 00:20:45] [INFO ] Removed a total of 1608 redundant transitions.
[2024-06-01 00:20:45] [INFO ] Flatten gal took : 366 ms
[2024-06-01 00:20:45] [INFO ] Fuse similar labels procedure discarded/fused a total of 752 labels/synchronizations in 76 ms.
[2024-06-01 00:20:45] [INFO ] Time to serialize gal into /tmp/StateSpace7667590525315611393.gal : 23 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace7667590525315611393.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst\_mod\_flat,5.08119e+135,52.9533,1134052,776465,85,2.67265e+06,861,955,962354,173,848,0
Total reachable state count : 5.081186092224349234319591722185027899443e+135

Max variable value : 2
STATE_SPACE MAX_TOKEN_IN_PLACE 2 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Maximum sum along a path : 731
STATE_SPACE MAX_TOKEN_PER_MARKING 731 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Exact state count : 508118609222434923438651327561203666941204236645042496559424758230801182015285261075041810887707347344572573677370164090694506849280013...156
STATE_SPACE STATES 5081186092224349234386513275612036669412042366450424965594247582308011820152852610750418108877073473445725736773701640906945068492800130 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Total runtime 93903 ms.

BK_STOP 1717201305738

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ perl -pe 's/.*\.//g'
++ sed s/.jar//
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S08D1C2A02"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is ViralEpidemic-PT-S08D1C2A02, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r444-smll-171701111400384"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S08D1C2A02.tgz
mv ViralEpidemic-PT-S08D1C2A02 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;