Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r444-smll-171701111400374.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is ViralEpidemic-PT-S04D1C1A06, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r444-smll-171701111400374
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 20M
-rw-r--r-- 1 mcc users 8.3K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 73K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.2K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 36K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:43 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.8K May 18 16:43 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.3K May 19 07:18 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K May 19 16:48 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K May 19 07:40 LTLFireability.txt
-rw-r--r-- 1 mcc users 20K May 19 19:31 LTLFireability.xml
-rw-r--r-- 1 mcc users 16K Apr 12 07:21 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 133K Apr 12 07:21 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 12K Apr 12 06:45 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 83K Apr 12 06:45 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Apr 23 08:04 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K Apr 23 08:04 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:43 equiv_col
-rw-r--r-- 1 mcc users 11 May 18 16:43 instance
-rw-r--r-- 1 mcc users 6 May 18 16:43 iscolored
-rw-r--r-- 1 mcc users 20M May 18 16:43 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-00
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-01
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-02
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-03
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-04
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-05
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-06
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-07
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-08
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-09
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-10
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-11
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-12
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-13
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-14
FORMULA_NAME ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-15

=== Now, execution of the tool begins

BK_START 1717196430187

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=ViralEpidemic-PT-S04D1C1A06
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
ReachabilityCardinality PT
Running Version 202405141337
[2024-05-31 23:00:32] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-05-31 23:00:32] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-31 23:00:35] [INFO ] Load time of PNML (sax parser for PT used): 2124 ms
[2024-05-31 23:00:35] [INFO ] Transformed 32767 places.
[2024-05-31 23:00:35] [INFO ] Transformed 49149 transitions.
[2024-05-31 23:00:35] [INFO ] Found NUPN structural information;
[2024-05-31 23:00:35] [INFO ] Parsed PT model containing 32767 places and 49149 transitions and 114681 arcs in 2818 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityCardinality.xml in 53 ms.
Working with output stream class java.io.PrintStream
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-02 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2024-05-31 23:00:41] [INFO ] Flatten gal took : 3949 ms
RANDOM walk for 40000 steps (64 resets) in 22078 ms. (1 steps per ms) remains 8/15 properties
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-15 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-13 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-09 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-07 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-05 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-03 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-01 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
[2024-05-31 23:00:43] [INFO ] Flatten gal took : 1961 ms
[2024-05-31 23:00:44] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality417136079566574418.gal : 1265 ms
[2024-05-31 23:00:44] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality1869260893231529428.prop : 18 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality417136079566574418.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality1869260893231529428.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...327
BEST_FIRST walk for 40004 steps (8 resets) in 15315 ms. (2 steps per ms) remains 8/8 properties
BEST_FIRST walk for 40004 steps (8 resets) in 17419 ms. (2 steps per ms) remains 8/8 properties
BEST_FIRST walk for 40004 steps (8 resets) in 16158 ms. (2 steps per ms) remains 8/8 properties
BEST_FIRST walk for 40004 steps (8 resets) in 10989 ms. (3 steps per ms) remains 8/8 properties
BEST_FIRST walk for 40004 steps (8 resets) in 12445 ms. (3 steps per ms) remains 8/8 properties
BEST_FIRST walk for 40004 steps (8 resets) in 11641 ms. (3 steps per ms) remains 8/8 properties
BEST_FIRST walk for 40004 steps (8 resets) in 11172 ms. (3 steps per ms) remains 8/8 properties
BEST_FIRST walk for 40004 steps (8 resets) in 11254 ms. (3 steps per ms) remains 8/8 properties
// Phase 1: matrix 49149 rows 32767 cols
[2024-05-31 23:01:37] [INFO ] Invariants computation overflowed in 26368 ms
All remaining problems are real, not stopping.
At refinement iteration 0 (INCLUDED_ONLY) 0/183 variables, 183/183 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/183 variables, 0/183 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 2 (OVERLAPS) 645/828 variables, 183/366 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/828 variables, 0/366 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 4 (OVERLAPS) 2899/3727 variables, 1082/1448 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/3727 variables, 1082/2530 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 6 (INCLUDED_ONLY) 0/3727 variables, 0/2530 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 7 (OVERLAPS) 4868/8595 variables, 1636/4166 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 8 (INCLUDED_ONLY) 0/8595 variables, 1636/5802 constraints. Problems are: Problem set: 0 solved, 8 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 8595/81916 variables, and 5802 constraints, problems are : Problem set: 0 solved, 8 unsolved in 5070 ms.
Refiners :[Domain max(s): 2901/32767 constraints, State Equation: 2901/32767 constraints, PredecessorRefiner: 8/8 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 8 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/183 variables, 183/183 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/183 variables, 0/183 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 2 (OVERLAPS) 645/828 variables, 183/366 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/828 variables, 0/366 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 4 (OVERLAPS) 2899/3727 variables, 1082/1448 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/3727 variables, 1082/2530 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 6 (INCLUDED_ONLY) 0/3727 variables, 8/2538 constraints. Problems are: Problem set: 0 solved, 8 unsolved
At refinement iteration 7 (INCLUDED_ONLY) 0/3727 variables, 0/2538 constraints. Problems are: Problem set: 0 solved, 8 unsolved
SMT process timed out in 37168ms, After SMT, problems are : Problem set: 0 solved, 8 unsolved
Skipping Parikh replay, no witness traces provided.
Support contains 183 out of 32767 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 32767/32767 places, 49149/49149 transitions.
Graph (complete) has 21844 edges and 32767 vertex of which 1132 are kept as prefixes of interest. Removing 31635 places using SCC suffix rule.71 ms
Discarding 31635 places :
Also discarding 46222 output transitions
Drop transitions (Output transitions of discarded places.) removed 46222 transitions
Drop transitions (Empty/Sink Transition effects.) removed 1925 transitions
Reduce isomorphic transitions removed 1925 transitions.
Drop transitions (Trivial Post-Agglo cleanup.) removed 124 transitions
Trivial Post-agglo rules discarded 124 transitions
Performed 124 trivial Post agglomeration. Transition count delta: 124
Iterating post reduction 0 with 2049 rules applied. Total rules applied 2050 place count 1132 transition count 878
Reduce places removed 124 places and 0 transitions.
Performed 1 Post agglomeration using F-continuation condition.Transition count delta: 1
Iterating post reduction 1 with 125 rules applied. Total rules applied 2175 place count 1008 transition count 877
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 2 with 1 rules applied. Total rules applied 2176 place count 1007 transition count 877
Performed 87 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 3 with 87 Pre rules applied. Total rules applied 2176 place count 1007 transition count 790
Deduced a syphon composed of 87 places in 1 ms
Reduce places removed 87 places and 0 transitions.
Iterating global reduction 3 with 174 rules applied. Total rules applied 2350 place count 920 transition count 790
Discarding 291 places :
Symmetric choice reduction at 3 with 291 rule applications. Total rules 2641 place count 629 transition count 499
Iterating global reduction 3 with 291 rules applied. Total rules applied 2932 place count 629 transition count 499
Performed 137 Post agglomeration using F-continuation condition.Transition count delta: 137
Deduced a syphon composed of 137 places in 4 ms
Reduce places removed 137 places and 0 transitions.
Iterating global reduction 3 with 274 rules applied. Total rules applied 3206 place count 492 transition count 362
Renaming transitions due to excessive name length > 1024 char.
Free-agglomeration rule applied 1 times.
Iterating global reduction 3 with 1 rules applied. Total rules applied 3207 place count 492 transition count 361
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 3 with 1 rules applied. Total rules applied 3208 place count 491 transition count 361
Reduce places removed 1 places and 1 transitions.
Iterating global reduction 4 with 1 rules applied. Total rules applied 3209 place count 490 transition count 360
Ensure Unique test removed 40 places
Iterating post reduction 4 with 40 rules applied. Total rules applied 3249 place count 450 transition count 360
Applied a total of 3249 rules in 892 ms. Remains 450 /32767 variables (removed 32317) and now considering 360/49149 (removed 48789) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 912 ms. Remains : 450/32767 places, 360/49149 transitions.
RANDOM walk for 34743 steps (118 resets) in 2241 ms. (15 steps per ms) remains 0/8 properties
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-14 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-12 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-11 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-10 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-08 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-06 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-04 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S04D1C1A06-ReachabilityCardinality-2024-00 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
ITS runner timed out or was interrupted.
ITS tools runner thread asked to quit. Dying gracefully.
All properties solved without resorting to model-checking.
Total runtime 77485 ms.

BK_STOP 1717196510204

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S04D1C1A06"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is ViralEpidemic-PT-S04D1C1A06, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r444-smll-171701111400374"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S04D1C1A06.tgz
mv ViralEpidemic-PT-S04D1C1A06 execution
cd execution
if [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "UpperBounds" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] || [ "ReachabilityCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;