Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r444-smll-171701111400368.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is ViralEpidemic-PT-S04D1C1A04, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r444-smll-171701111400368
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 1.6M
-rw-r--r-- 1 mcc users 11K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 99K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.1K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 50K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:43 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.9K May 19 07:18 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K May 19 16:48 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K May 19 07:40 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 19 19:31 LTLFireability.xml
-rw-r--r-- 1 mcc users 13K Apr 12 04:28 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 108K Apr 12 04:28 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.4K Apr 12 04:25 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 59K Apr 12 04:25 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Apr 23 08:04 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K Apr 23 08:04 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:43 equiv_col
-rw-r--r-- 1 mcc users 11 May 18 16:43 instance
-rw-r--r-- 1 mcc users 6 May 18 16:43 iscolored
-rw-r--r-- 1 mcc users 1.2M May 18 16:43 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1717189077957

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=ViralEpidemic-PT-S04D1C1A04
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202405141337
[2024-05-31 20:58:00] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-05-31 20:58:00] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-31 20:58:01] [INFO ] Load time of PNML (sax parser for PT used): 586 ms
[2024-05-31 20:58:01] [INFO ] Transformed 2047 places.
[2024-05-31 20:58:01] [INFO ] Transformed 3069 transitions.
[2024-05-31 20:58:01] [INFO ] Found NUPN structural information;
[2024-05-31 20:58:01] [INFO ] Parsed PT model containing 2047 places and 3069 transitions and 7161 arcs in 1006 ms.
Starting structural reductions in STATESPACE mode, iteration 0 : 2047/2047 places, 3069/3069 transitions.
[2024-05-31 20:58:01] [INFO ] Redundant transitions in 324 ms returned []
Running 3068 sub problems to find dead transitions.
// Phase 1: matrix 3069 rows 2047 cols
[2024-05-31 20:58:02] [INFO ] Computed 1 invariants in 518 ms
Error getting values : (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
At refinement iteration 0 (INCLUDED_ONLY) 0/2046 variables, 2046/2046 constraints. Problems are: Problem set: 0 solved, 3068 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 2046/5116 variables, and 2046 constraints, problems are : Problem set: 0 solved, 3068 unsolved in 30242 ms.
Refiners :[Domain max(s): 2046/2047 constraints, Generalized P Invariants (flows): 0/1 constraints, State Equation: 0/2047 constraints, PredecessorRefiner: 3068/3068 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 3068 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/2046 variables, 2046/2046 constraints. Problems are: Problem set: 0 solved, 3068 unsolved
Error getting values : (error "ParserException while parsing response: ((s0 1)
(s2 1)
(s3 1)
(s4 1)
(s5 1)
(s6 1)
(s7 1)
(s8 1)
(s9 1)
(s10 1)
(s11 1)
(s12 1)
(s13 timeout
1 org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 2046/5116 variables, and 2046 constraints, problems are : Problem set: 0 solved, 3068 unsolved in 30082 ms.
Refiners :[Domain max(s): 2046/2047 constraints, Generalized P Invariants (flows): 0/1 constraints, State Equation: 0/2047 constraints, PredecessorRefiner: 0/3068 constraints, Known Traps: 0/0 constraints]
After SMT, in 62589ms problems are : Problem set: 0 solved, 3068 unsolved
Search for dead transitions found 0 dead transitions in 62757ms
Finished structural reductions in STATESPACE mode , in 1 iterations and 63368 ms. Remains : 2047/2047 places, 3069/3069 transitions.
Final net has 2047 places and 3069 transitions.
[2024-05-31 20:59:05] [INFO ] Flatten gal took : 676 ms
[2024-05-31 20:59:05] [INFO ] Applying decomposition
[2024-05-31 20:59:06] [INFO ] Flatten gal took : 181 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/convert-linux64' '-i' '/tmp/graph9271199830817321945.txt' '-o' '/tmp/graph9271199830817321945.bin' '-w' '/tmp/graph9271199830817321945.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/louvain-linux64' '/tmp/graph9271199830817321945.bin' '-l' '-1' '-v' '-w' '/tmp/graph9271199830817321945.weights' '-q' '0' '-e' '0.001'
[2024-05-31 20:59:06] [INFO ] Decomposing Gal with order
[2024-05-31 20:59:06] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-05-31 20:59:07] [INFO ] Removed a total of 3427 redundant transitions.
[2024-05-31 20:59:07] [INFO ] Flatten gal took : 416 ms
[2024-05-31 20:59:08] [INFO ] Fuse similar labels procedure discarded/fused a total of 2838 labels/synchronizations in 321 ms.
[2024-05-31 20:59:08] [INFO ] Time to serialize gal into /tmp/StateSpace15619755239675496497.gal : 55 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace15619755239675496497.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...220
ITS-tools command line returned an error code 137
[2024-05-31 21:09:28] [INFO ] Applying decomposition
[2024-05-31 21:09:29] [INFO ] Flatten gal took : 118 ms
[2024-05-31 21:09:29] [INFO ] Decomposing Gal with order
[2024-05-31 21:09:29] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-05-31 21:09:29] [INFO ] Removed a total of 3410 redundant transitions.
[2024-05-31 21:09:29] [INFO ] Flatten gal took : 295 ms
[2024-05-31 21:09:30] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 18 ms.
[2024-05-31 21:09:30] [INFO ] Time to serialize gal into /tmp/StateSpace1115808160470361039.gal : 54 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace1115808160470361039.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst\_mod\_flat,9.04332e+319,254.653,3344280,1.66359e+06,28,7.41176e+06,5510,6500,3.87322e+06,34,3832,0
Total reachable state count : 9.043317658051274878652941902468801864317e+319

Max variable value : 1
STATE_SPACE MAX_TOKEN_IN_PLACE 1 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Maximum sum along a path : 1706
STATE_SPACE MAX_TOKEN_PER_MARKING 1706 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Exact state count : 904331765805127488281594097187644878836815747529178487592753779430991755506543838672248791133942096371040631151004531646563191348503723...340
STATE_SPACE STATES 90433176580512748828159409718764487883681574752917848759275377943099175550654383867224879113394209637104063115100453164656319134850372339293234801832388501737072571386503811294105335300802264129033907564479011059831066012742496460167194974259611943040640365740868051417695532732630697560111817146001981690666299140403216 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Total runtime 964448 ms.

BK_STOP 1717190044690

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S04D1C1A04"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is ViralEpidemic-PT-S04D1C1A04, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r444-smll-171701111400368"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S04D1C1A04.tgz
mv ViralEpidemic-PT-S04D1C1A04 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;