Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r409-tall-171690547500093.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..............
=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is StigmergyCommit-PT-05b, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r409-tall-171690547500093
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 1.8M
-rw-r--r-- 1 mcc users 8.2K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 92K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.9K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 56K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K May 19 07:17 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K May 19 16:41 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 19 07:34 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 19 19:21 LTLFireability.xml
-rw-r--r-- 1 mcc users 13K Apr 11 17:56 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 128K Apr 11 17:56 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 7.4K Apr 11 17:55 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 59K Apr 11 17:55 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Apr 23 07:59 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Apr 23 07:59 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:43 equiv_col
-rw-r--r-- 1 mcc users 4 May 18 16:43 instance
-rw-r--r-- 1 mcc users 6 May 18 16:43 iscolored
-rw-r--r-- 1 mcc users 1.4M May 18 16:43 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1717100303152

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StableMarking
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=StigmergyCommit-PT-05b
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StableMarking PT
Running Version 202405141337
[2024-05-30 20:18:24] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2024-05-30 20:18:24] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-30 20:18:24] [INFO ] Load time of PNML (sax parser for PT used): 239 ms
[2024-05-30 20:18:24] [INFO ] Transformed 1837 places.
[2024-05-30 20:18:24] [INFO ] Transformed 3460 transitions.
[2024-05-30 20:18:24] [INFO ] Found NUPN structural information;
[2024-05-30 20:18:24] [INFO ] Parsed PT model containing 1837 places and 3460 transitions and 22362 arcs in 402 ms.
Graph (trivial) has 1824 edges and 1837 vertex of which 126 / 1837 are part of one of the 18 SCC in 16 ms
Free SCC test removed 108 places
Structural test allowed to assert that 812 places are NOT stable. Took 79 ms.
Ensure Unique test removed 120 transitions
Reduce redundant transitions removed 120 transitions.
[2024-05-30 20:18:26] [INFO ] Flatten gal took : 902 ms
RANDOM walk for 40000 steps (346 resets) in 6348 ms. (6 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 11 ms. (10 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 28 ms. (4 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 9 ms. (12 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 122 steps (8 resets) in 24 ms. (4 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 25 ms. (4 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 7 ms. (15 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 7 ms. (15 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 6 ms. (17 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 6 ms. (17 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 24 ms. (4 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 9 ms. (12 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 12 ms. (9 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 10 ms. (11 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
[2024-05-30 20:18:26] [INFO ] Flatten gal took : 198 ms
BEST_FIRST walk for 124 steps (8 resets) in 40 ms. (3 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 122 steps (8 resets) in 10 ms. (11 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 122 steps (8 resets) in 13 ms. (8 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 9 ms. (12 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 13 ms. (8 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 10 ms. (11 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 7 ms. (15 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 9 ms. (12 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 15 ms. (7 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 10 ms. (11 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 122 steps (8 resets) in 7 ms. (15 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 26 ms. (4 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 7 ms. (15 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 9 ms. (12 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 122 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 122 steps (8 resets) in 9 ms. (12 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 24 ms. (4 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 122 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 9 ms. (12 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 25 ms. (4 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 7 ms. (15 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 6 ms. (17 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 7 ms. (15 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 122 steps (8 resets) in 10 ms. (11 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 9 ms. (12 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 123 steps (8 resets) in 7 ms. (15 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 6 ms. (17 steps per ms) remains 1025/1025 properties
BEST_FIRST walk for 124 steps (8 resets) in 8 ms. (13 steps per ms) remains 1025/1025 properties
[2024-05-30 20:18:27] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality12975579745367452882.gal : 131 ms
[2024-05-30 20:18:27] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality228033671947884435.prop : 5 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality12975579745367452882.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality228033671947884435.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...328
Loading property file /tmp/ReachabilityCardinality228033671947884435.prop.
Probabilistic random walk after 30001 steps, saw 9470 distinct states, run finished after 1314 ms. (steps per millisecond=22 ) properties seen :63
[2024-05-30 20:18:28] [INFO ] Flow matrix only has 3323 transitions (discarded 17 similar events)
// Phase 1: matrix 3323 rows 1729 cols
[2024-05-30 20:18:28] [INFO ] Computed 7 invariants in 126 ms
[2024-05-30 20:18:28] [INFO ] State equation strengthened by 1 read => feed constraints.
SDD proceeding with computation,1025 properties remain. new max is 4
SDD size :1 after 2
SDD proceeding with computation,1025 properties remain. new max is 8
SDD size :2 after 7
SDD proceeding with computation,1025 properties remain. new max is 16
SDD size :7 after 10
SDD proceeding with computation,1025 properties remain. new max is 32
Error getting values : (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
SDD size :10 after 17
At refinement iteration 0 (INCLUDED_ONLY) 0/962 variables, 962/962 constraints. Problems are: Problem set: 0 solved, 962 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 962/5052 variables, and 962 constraints, problems are : Problem set: 0 solved, 962 unsolved in 5091 ms.
Refiners :[Domain max(s): 962/1729 constraints, Positive P Invariants (semi-flows): 0/7 constraints, State Equation: 0/1729 constraints, ReadFeed: 0/1 constraints, PredecessorRefiner: 962/962 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 962 unsolved
SDD proceeding with computation,1025 properties remain. new max is 64
SDD size :17 after 20
SDD proceeding with computation,1025 properties remain. new max is 128
SDD size :20 after 57
At refinement iteration 0 (INCLUDED_ONLY) 0/962 variables, 962/962 constraints. Problems are: Problem set: 0 solved, 962 unsolved
SDD proceeding with computation,1025 properties remain. new max is 256
SDD size :57 after 291
SDD proceeding with computation,1025 properties remain. new max is 512
SDD size :291 after 1689
SDD proceeding with computation,1025 properties remain. new max is 1024
SDD size :1689 after 3313
SDD proceeding with computation,1025 properties remain. new max is 2048
SDD size :3313 after 3808
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 962/5052 variables, and 962 constraints, problems are : Problem set: 0 solved, 962 unsolved in 5018 ms.
Refiners :[Domain max(s): 962/1729 constraints, Positive P Invariants (semi-flows): 0/7 constraints, State Equation: 0/1729 constraints, ReadFeed: 0/1 constraints, PredecessorRefiner: 0/962 constraints, Known Traps: 0/0 constraints]
After SMT, in 11132ms problems are : Problem set: 0 solved, 962 unsolved
Skipping Parikh replay, no witness traces provided.
Support contains 962 out of 1729 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 1729/1729 places, 3340/3340 transitions.
Drop transitions (Empty/Sink Transition effects.) removed 18 transitions
Reduce isomorphic transitions removed 18 transitions.
Drop transitions (Trivial Post-Agglo cleanup.) removed 635 transitions
Trivial Post-agglo rules discarded 635 transitions
Performed 635 trivial Post agglomeration. Transition count delta: 635
Iterating post reduction 0 with 653 rules applied. Total rules applied 653 place count 1729 transition count 2687
Reduce places removed 635 places and 0 transitions.
Iterating post reduction 1 with 635 rules applied. Total rules applied 1288 place count 1094 transition count 2687
Performed 14 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 2 with 14 Pre rules applied. Total rules applied 1288 place count 1094 transition count 2673
Deduced a syphon composed of 14 places in 3 ms
Reduce places removed 14 places and 0 transitions.
Iterating global reduction 2 with 28 rules applied. Total rules applied 1316 place count 1080 transition count 2673
Discarding 3 places :
Symmetric choice reduction at 2 with 3 rule applications. Total rules 1319 place count 1077 transition count 2670
Iterating global reduction 2 with 3 rules applied. Total rules applied 1322 place count 1077 transition count 2670
Performed 14 Post agglomeration using F-continuation condition.Transition count delta: 14
Deduced a syphon composed of 14 places in 10 ms
Reduce places removed 14 places and 0 transitions.
Iterating global reduction 2 with 28 rules applied. Total rules applied 1350 place count 1063 transition count 2656
Performed 14 Post agglomeration using F-continuation condition.Transition count delta: -24
Deduced a syphon composed of 14 places in 28 ms
Reduce places removed 14 places and 0 transitions.
Iterating global reduction 2 with 28 rules applied. Total rules applied 1378 place count 1049 transition count 2680
Free-agglomeration rule applied 50 times.
Iterating global reduction 2 with 50 rules applied. Total rules applied 1428 place count 1049 transition count 2630
Reduce places removed 50 places and 0 transitions.
Iterating post reduction 2 with 50 rules applied. Total rules applied 1478 place count 999 transition count 2630
SDD proceeding with computation,1025 properties remain. new max is 4096
SDD size :3808 after 11310
Applied a total of 1478 rules in 987 ms. Remains 999 /1729 variables (removed 730) and now considering 2630/3340 (removed 710) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 1011 ms. Remains : 999/1729 places, 2630/3340 transitions.
SDD proceeding with computation,1025 properties remain. new max is 8192
SDD size :11310 after 333905
Invariant property smplace_1726 does not hold.
RANDOM walk for 218040 steps (341 resets) in 18625 ms. (11 steps per ms) remains 0/962 properties
ITS runner timed out or was interrupted.
ITS tools runner thread asked to quit. Dying gracefully.
Able to resolve query StableMarking after proving 1027 properties.
FORMULA StableMarking FALSE TECHNIQUES RANDOM_WALK PROBABILISTIC_WALK MARKED_SUFFIX_TEST TRIVIAL_UNMARKED_SCC_TEST TOPOLOGICAL
Total runtime 21596 ms.

BK_STOP 1717100325954

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StableMarking = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="StigmergyCommit-PT-05b"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is StigmergyCommit-PT-05b, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r409-tall-171690547500093"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/StigmergyCommit-PT-05b.tgz
mv StigmergyCommit-PT-05b execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StableMarking.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;