About the Execution of ITS-Tools for Sudoku-COL-AN09
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/data/fkordon/mcc2024-input.r400-tall-171690532400477.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
...............
=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is Sudoku-COL-AN09, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r400-tall-171690532400477
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 492K
-rw-r--r-- 1 mcc users 6.9K Apr 12 10:34 CTLCardinality.txt
-rw-r--r-- 1 mcc users 70K Apr 12 10:34 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.8K Apr 12 10:06 CTLFireability.txt
-rw-r--r-- 1 mcc users 52K Apr 12 10:06 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:43 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.8K Apr 23 08:00 LTLCardinality.txt
-rw-r--r-- 1 mcc users 28K Apr 23 08:00 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Apr 23 08:00 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Apr 23 08:00 LTLFireability.xml
-rw-r--r-- 1 mcc users 12K Apr 12 11:00 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 119K Apr 12 11:00 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 13K Apr 12 10:36 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 111K Apr 12 10:36 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Apr 23 08:00 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K Apr 23 08:00 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 18 16:43 equiv_pt
-rw-r--r-- 1 mcc users 5 May 18 16:43 instance
-rw-r--r-- 1 mcc users 5 May 18 16:43 iscolored
-rw-r--r-- 1 mcc users 6.5K May 18 16:43 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of positive values
NUM_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-00
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-01
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-02
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-03
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-04
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-05
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-06
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-07
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-08
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-09
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-10
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-11
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-12
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-13
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-14
FORMULA_NAME Sudoku-COL-AN09-UpperBounds-15
=== Now, execution of the tool begins
BK_START 1717030985166
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=UpperBounds
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Sudoku-COL-AN09
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is COL
UpperBounds COL
Running Version 202405141337
[2024-05-30 01:03:06] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-05-30 01:03:06] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-30 01:03:06] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[2024-05-30 01:03:06] [WARNING] Using fallBack plugin, rng conformance not checked
[2024-05-30 01:03:06] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 476 ms
[2024-05-30 01:03:06] [INFO ] Imported 4 HL places and 1 HL transitions for a total of 972 PT places and 729.0 transition bindings in 11 ms.
Parsed 16 properties from file /home/mcc/execution/UpperBounds.xml in 8 ms.
Reduction of identical properties reduced properties to check from 16 to 4
[2024-05-30 01:03:06] [INFO ] Built PT skeleton of HLPN with 4 places and 1 transitions 4 arcs in 4 ms.
[2024-05-30 01:03:06] [INFO ] Skeletonized 4 HLPN properties in 0 ms.
// Phase 1: matrix 1 rows 4 cols
[2024-05-30 01:03:06] [INFO ] Computed 3 invariants in 3 ms
Current structural bounds on expressions (after Invariants on skeleton) : Max Seen:[0, 81, 81, 81] Max Struct:[81, 81, 81, 81]
FORMULA Sudoku-COL-AN09-UpperBounds-15 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-12 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-05 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-06 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-07 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-03 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-02 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-08 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-09 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-01 81 TECHNIQUES TOPOLOGICAL CPN_APPROX INITIAL_STATE
[2024-05-30 01:03:06] [INFO ] Invariant cache hit.
[2024-05-30 01:03:07] [INFO ] [Real]Absence check using 3 positive place invariants in 6 ms returned sat
[2024-05-30 01:03:07] [INFO ] [Real]Absence check using state equation in 7 ms returned sat
[2024-05-30 01:03:07] [INFO ] Computed and/alt/rep : 0/0/0 causal constraints (skipped 0 transitions) in 0 ms.
[2024-05-30 01:03:07] [INFO ] Added : 0 causal constraints over 0 iterations in 6 ms. Result :sat
Minimization took 6 ms.
Current structural bounds on expressions (after SMT on skeleton) : Max Seen:[0] Max Struct:[81]
Domain [N(9), N(9)] of place Rows breaks symmetries in sort N
[2024-05-30 01:03:07] [INFO ] Unfolded HLPN to a Petri net with 972 places and 729 transitions 2916 arcs in 32 ms.
[2024-05-30 01:03:07] [INFO ] Unfolded 1 HLPN properties in 0 ms.
Current structural bounds on expressions (Initially) : Max Seen:[0] Max Struct:[+inf]
Current structural bounds on expressions (Adding known information on max bounds.) : Max Seen:[0] Max Struct:[81]
Current structural bounds on expressions (Before main loop) : Max Seen:[0] Max Struct:[81]
// Phase 1: matrix 729 rows 972 cols
[2024-05-30 01:03:07] [INFO ] Computed 243 invariants in 13 ms
Current structural bounds on expressions (after invariants) : Max Seen:[0] Max Struct:[81]
RANDOM walk for 10000 steps (141 resets) in 567 ms. (17 steps per ms)
BEST_FIRST walk for 10001 steps (2 resets) in 141 ms. (70 steps per ms)
Current structural bounds on expressions (after WALK) : Max Seen:[75] Max Struct:[81]
[2024-05-30 01:03:07] [INFO ] Invariant cache hit.
[2024-05-30 01:03:08] [INFO ] [Real]Absence check using 243 positive place invariants in 195 ms returned sat
[2024-05-30 01:03:08] [INFO ] [Real]Absence check using state equation in 482 ms returned sat
[2024-05-30 01:03:08] [INFO ] Computed and/alt/rep : 0/0/0 causal constraints (skipped 0 transitions) in 37 ms.
[2024-05-30 01:03:09] [INFO ] Added : 0 causal constraints over 0 iterations in 119 ms. Result :sat
Minimization took 639 ms.
Current structural bounds on expressions (after SMT) : Max Seen:[75] Max Struct:[81]
Current structural bounds on expressions (After Parikh guided walk) : Max Seen:[75] Max Struct:[81]
Support contains 729 out of 972 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 972/972 places, 729/729 transitions.
Applied a total of 0 rules in 58 ms. Remains 972 /972 variables (removed 0) and now considering 729/729 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 73 ms. Remains : 972/972 places, 729/729 transitions.
[2024-05-30 01:03:09] [INFO ] Invariant cache hit.
Current structural bounds on expressions (after invariants) : Max Seen:[75] Max Struct:[81]
RANDOM walk for 561602 steps (7971 resets) in 30001 ms. (18 steps per ms)
BEST_FIRST walk for 377273 steps (23 resets) in 5003 ms. (75 steps per ms)
Current structural bounds on expressions (after WALK) : Max Seen:[76] Max Struct:[81]
[2024-05-30 01:03:44] [INFO ] Invariant cache hit.
[2024-05-30 01:03:45] [INFO ] [Real]Absence check using 243 positive place invariants in 280 ms returned sat
[2024-05-30 01:03:45] [INFO ] [Real]Absence check using state equation in 464 ms returned sat
[2024-05-30 01:03:45] [INFO ] Solution in real domain found non-integer solution.
[2024-05-30 01:03:46] [INFO ] [Nat]Absence check using 243 positive place invariants in 150 ms returned sat
[2024-05-30 01:03:46] [INFO ] [Nat]Absence check using state equation in 532 ms returned sat
[2024-05-30 01:03:46] [INFO ] Computed and/alt/rep : 0/0/0 causal constraints (skipped 0 transitions) in 32 ms.
[2024-05-30 01:03:46] [INFO ] Added : 0 causal constraints over 0 iterations in 162 ms. Result :sat
Minimization took 1926 ms.
Current structural bounds on expressions (after SMT) : Max Seen:[76] Max Struct:[81]
Current structural bounds on expressions (After Parikh guided walk) : Max Seen:[81] Max Struct:[81]
Support contains 729 out of 972 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 972/972 places, 729/729 transitions.
Applied a total of 0 rules in 33 ms. Remains 972 /972 variables (removed 0) and now considering 729/729 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 33 ms. Remains : 972/972 places, 729/729 transitions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 972/972 places, 729/729 transitions.
Applied a total of 0 rules in 17 ms. Remains 972 /972 variables (removed 0) and now considering 729/729 (removed 0) transitions.
[2024-05-30 01:03:49] [INFO ] Invariant cache hit.
[2024-05-30 01:03:49] [INFO ] Implicit Places using invariants in 597 ms returned []
[2024-05-30 01:03:49] [INFO ] Invariant cache hit.
[2024-05-30 01:03:50] [INFO ] Implicit Places using invariants and state equation in 1074 ms returned []
Implicit Place search using SMT with State Equation took 1674 ms to find 0 implicit places.
[2024-05-30 01:03:50] [INFO ] Redundant transitions in 42 ms returned []
Running 0 sub problems to find dead transitions.
Search for dead transitions found 0 dead transitions in 1ms
Finished structural reductions in REACHABILITY mode , in 1 iterations and 1754 ms. Remains : 972/972 places, 729/729 transitions.
[2024-05-30 01:03:50] [INFO ] Invariant cache hit.
Current structural bounds on expressions (after invariants) : Max Seen:[81] Max Struct:[81]
FORMULA Sudoku-COL-AN09-UpperBounds-04 81 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-10 81 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-11 81 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-13 81 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-14 81 TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Sudoku-COL-AN09-UpperBounds-00 81 TECHNIQUES TOPOLOGICAL INITIAL_STATE
RANDOM walk for 743918 steps (10555 resets) in 30001 ms. (24 steps per ms)
BEST_FIRST walk for 0 steps (0 resets) in 0 ms. (0 steps per ms)
Current structural bounds on expressions (after WALK) : Max Seen:[] Max Struct:[]
RANDOM walk for 0 steps (0 resets) in 6 ms. (0 steps per ms) remains 0/0 properties
Finished probabilistic random walk after 0 steps, run visited all 0 properties in 0 ms. (steps per millisecond=0 )
[2024-05-30 01:04:20] [INFO ] Flatten gal took : 112 ms
[2024-05-30 01:04:21] [INFO ] Flatten gal took : 78 ms
[2024-05-30 01:04:21] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality4287938208314502052.gal : 38 ms
[2024-05-30 01:04:21] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality8610486135473394790.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality4287938208314502052.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality8610486135473394790.prop' '--nowitness' '--gen-order' 'FOLLOW'
ITS runner timed out or was interrupted.
its-reach command run as :
/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...328
java.io.IOException: Stream closed
at java.base/java.io.BufferedInputStream.getBufIfOpen(BufferedInputStream.java:168)
at java.base/java.io.BufferedInputStream.read(BufferedInputStream.java:334)
at java.base/sun.nio.cs.StreamDecoder.readBytes(StreamDecoder.java:270)
at java.base/sun.nio.cs.StreamDecoder.implRead(StreamDecoder.java:313)
at java.base/sun.nio.cs.StreamDecoder.read(StreamDecoder.java:188)
at java.base/java.io.InputStreamReader.read(InputStreamReader.java:177)
at java.base/java.io.BufferedReader.fill(BufferedReader.java:162)
at java.base/java.io.BufferedReader.readLine(BufferedReader.java:329)
at java.base/java.io.BufferedReader.readLine(BufferedReader.java:396)
at fr.lip6.move.gal.application.runner.its.ITSRunner$ITSInterpreter.run(ITSRunner.java:211)
at java.base/java.lang.Thread.run(Thread.java:840)
ITS tools runner thread asked to quit. Dying gracefully.
Current structural bounds on expressions (After reachability solving 0 queries.) : Max Seen:[] Max Struct:[]
All properties solved without resorting to model-checking.
Total runtime 74907 ms.
BK_STOP 1717031061290
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ UpperBounds = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination UpperBounds -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Sudoku-COL-AN09"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is Sudoku-COL-AN09, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r400-tall-171690532400477"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/Sudoku-COL-AN09.tgz
mv Sudoku-COL-AN09 execution
cd execution
if [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "UpperBounds" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] || [ "UpperBounds" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] ; then
echo "FORMULA_NAME UpperBounds"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;