Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r268-smll-171654407400328.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is PhaseVariation-PT-D05CS100, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r268-smll-171654407400328
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 1.2M
-rw-r--r-- 1 mcc users 11K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 101K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 11K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 69K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:43 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.2K Apr 23 07:42 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K Apr 23 07:42 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.4K May 19 07:25 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 19 18:45 LTLFireability.xml
-rw-r--r-- 1 mcc users 14K Apr 11 20:53 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 115K Apr 11 20:53 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 16K Apr 11 20:52 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 90K Apr 11 20:52 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Apr 23 07:42 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K Apr 23 07:42 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:43 equiv_col
-rw-r--r-- 1 mcc users 9 May 18 16:43 instance
-rw-r--r-- 1 mcc users 6 May 18 16:43 iscolored
-rw-r--r-- 1 mcc users 633K May 18 16:43 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1716810610769

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=PhaseVariation-PT-D05CS100
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202405141337
[2024-05-27 11:50:12] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-05-27 11:50:12] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-27 11:50:13] [INFO ] Load time of PNML (sax parser for PT used): 474 ms
[2024-05-27 11:50:13] [INFO ] Transformed 77 places.
[2024-05-27 11:50:13] [INFO ] Transformed 677 transitions.
[2024-05-27 11:50:13] [INFO ] Parsed PT model containing 77 places and 677 transitions and 4685 arcs in 710 ms.
Starting structural reductions in STATESPACE mode, iteration 0 : 77/77 places, 677/677 transitions.
Running 659 sub problems to find dead transitions.
[2024-05-27 11:50:14] [INFO ] Flow matrix only has 51 transitions (discarded 626 similar events)
// Phase 1: matrix 51 rows 77 cols
[2024-05-27 11:50:14] [INFO ] Computed 26 invariants in 9 ms
[2024-05-27 11:50:14] [INFO ] State equation strengthened by 33 read => feed constraints.
At refinement iteration 0 (INCLUDED_ONLY) 0/76 variables, 25/25 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/76 variables, 0/25 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 2 (OVERLAPS) 1/77 variables, 1/26 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/77 variables, 0/26 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 4 (OVERLAPS) 51/128 variables, 77/103 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/128 variables, 33/136 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 6 (INCLUDED_ONLY) 0/128 variables, 0/136 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 7 (OVERLAPS) 0/128 variables, 0/136 constraints. Problems are: Problem set: 0 solved, 659 unsolved
No progress, stopping.
After SMT solving in domain Real declared 128/128 variables, and 136 constraints, problems are : Problem set: 0 solved, 659 unsolved in 19918 ms.
Refiners :[Positive P Invariants (semi-flows): 26/26 constraints, State Equation: 77/77 constraints, ReadFeed: 33/33 constraints, PredecessorRefiner: 659/659 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 659 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/76 variables, 25/25 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/76 variables, 0/25 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 2 (OVERLAPS) 1/77 variables, 1/26 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/77 variables, 0/26 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 4 (OVERLAPS) 51/128 variables, 77/103 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/128 variables, 33/136 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 6 (INCLUDED_ONLY) 0/128 variables, 659/795 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 7 (INCLUDED_ONLY) 0/128 variables, 0/795 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 8 (OVERLAPS) 0/128 variables, 0/795 constraints. Problems are: Problem set: 0 solved, 659 unsolved
No progress, stopping.
After SMT solving in domain Int declared 128/128 variables, and 795 constraints, problems are : Problem set: 0 solved, 659 unsolved in 20035 ms.
Refiners :[Positive P Invariants (semi-flows): 26/26 constraints, State Equation: 77/77 constraints, ReadFeed: 33/33 constraints, PredecessorRefiner: 659/659 constraints, Known Traps: 0/0 constraints]
After SMT, in 40452ms problems are : Problem set: 0 solved, 659 unsolved
Search for dead transitions found 0 dead transitions in 40525ms
[2024-05-27 11:50:54] [INFO ] Redundant transitions in 70 ms returned []
Running 659 sub problems to find dead transitions.
[2024-05-27 11:50:54] [INFO ] Flow matrix only has 51 transitions (discarded 626 similar events)
[2024-05-27 11:50:54] [INFO ] Invariant cache hit.
[2024-05-27 11:50:54] [INFO ] State equation strengthened by 33 read => feed constraints.
At refinement iteration 0 (INCLUDED_ONLY) 0/76 variables, 25/25 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/76 variables, 0/25 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 2 (OVERLAPS) 1/77 variables, 1/26 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/77 variables, 0/26 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 4 (OVERLAPS) 51/128 variables, 77/103 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/128 variables, 33/136 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 6 (INCLUDED_ONLY) 0/128 variables, 0/136 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 7 (OVERLAPS) 0/128 variables, 0/136 constraints. Problems are: Problem set: 0 solved, 659 unsolved
No progress, stopping.
After SMT solving in domain Real declared 128/128 variables, and 136 constraints, problems are : Problem set: 0 solved, 659 unsolved in 20092 ms.
Refiners :[Positive P Invariants (semi-flows): 26/26 constraints, State Equation: 77/77 constraints, ReadFeed: 33/33 constraints, PredecessorRefiner: 659/659 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 659 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/76 variables, 25/25 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/76 variables, 0/25 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 2 (OVERLAPS) 1/77 variables, 1/26 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/77 variables, 0/26 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 4 (OVERLAPS) 51/128 variables, 77/103 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/128 variables, 33/136 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 6 (INCLUDED_ONLY) 0/128 variables, 659/795 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 7 (INCLUDED_ONLY) 0/128 variables, 0/795 constraints. Problems are: Problem set: 0 solved, 659 unsolved
At refinement iteration 8 (OVERLAPS) 0/128 variables, 0/795 constraints. Problems are: Problem set: 0 solved, 659 unsolved
No progress, stopping.
After SMT solving in domain Int declared 128/128 variables, and 795 constraints, problems are : Problem set: 0 solved, 659 unsolved in 20501 ms.
Refiners :[Positive P Invariants (semi-flows): 26/26 constraints, State Equation: 77/77 constraints, ReadFeed: 33/33 constraints, PredecessorRefiner: 659/659 constraints, Known Traps: 0/0 constraints]
After SMT, in 41056ms problems are : Problem set: 0 solved, 659 unsolved
Search for dead transitions found 0 dead transitions in 41077ms
Finished structural reductions in STATESPACE mode , in 1 iterations and 81944 ms. Remains : 77/77 places, 677/677 transitions.
Final net has 77 places and 677 transitions.
[2024-05-27 11:51:36] [INFO ] Flatten gal took : 171 ms
[2024-05-27 11:51:36] [INFO ] Applying decomposition
[2024-05-27 11:51:36] [INFO ] Flatten gal took : 96 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/convert-linux64' '-i' '/tmp/graph8859030273653251931.txt' '-o' '/tmp/graph8859030273653251931.bin' '-w' '/tmp/graph8859030273653251931.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/louvain-linux64' '/tmp/graph8859030273653251931.bin' '-l' '-1' '-v' '-w' '/tmp/graph8859030273653251931.weights' '-q' '0' '-e' '0.001'
[2024-05-27 11:51:36] [INFO ] Decomposing Gal with order
[2024-05-27 11:51:36] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-05-27 11:51:36] [INFO ] Removed a total of 1727 redundant transitions.
[2024-05-27 11:51:36] [INFO ] Flatten gal took : 189 ms
[2024-05-27 11:51:36] [INFO ] Fuse similar labels procedure discarded/fused a total of 360 labels/synchronizations in 33 ms.
[2024-05-27 11:51:36] [INFO ] Time to serialize gal into /tmp/StateSpace15663351738085567708.gal : 8 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace15663351738085567708.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...220
Detected timeout of ITS tools.
[2024-05-27 12:12:04] [INFO ] Flatten gal took : 97 ms
[2024-05-27 12:12:04] [INFO ] Time to serialize gal into /tmp/StateSpace18215226528775362193.gal : 28 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace18215226528775362193.gal' '-t' 'CGAL' '--stats' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...241
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst,8.21904e+32,795.347,8201632,2,62074,5,6.56457e+07,6,0,910,4.66377e+07,0
Total reachable state count : 821904221173146044013848177934336

Max variable value : 125
STATE_SPACE MAX_TOKEN_IN_PLACE 125 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Maximum sum along a path : 251
STATE_SPACE MAX_TOKEN_PER_MARKING 251 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Exact state count : 821904221173146044000443072655928
STATE_SPACE STATES 821904221173146044000443072655928 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Total runtime 2108167 ms.

BK_STOP 1716812721132

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PhaseVariation-PT-D05CS100"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is PhaseVariation-PT-D05CS100, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r268-smll-171654407400328"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PhaseVariation-PT-D05CS100.tgz
mv PhaseVariation-PT-D05CS100 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;