Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r233-tall-171649622400041.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..............
=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is JoinFreeModules-PT-0500, examination is ReachabilityDeadlock
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r233-tall-171649622400041
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 2.0M
-rw-r--r-- 1 mcc users 7.1K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 74K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.1K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 43K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:42 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.3K May 19 07:10 LTLCardinality.txt
-rw-r--r-- 1 mcc users 23K May 19 16:02 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 19 07:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 19 18:33 LTLFireability.xml
-rw-r--r-- 1 mcc users 15K Apr 11 14:21 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 155K Apr 11 14:21 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 6.9K Apr 11 14:20 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 54K Apr 11 14:20 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 19 07:12 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 19 15:27 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:42 equiv_col
-rw-r--r-- 1 mcc users 5 May 18 16:42 instance
-rw-r--r-- 1 mcc users 6 May 18 16:42 iscolored
-rw-r--r-- 1 mcc users 1.6M May 18 16:42 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME ReachabilityDeadlock

=== Now, execution of the tool begins

BK_START 1716535032249

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityDeadlock
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=JoinFreeModules-PT-0500
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
ReachabilityDeadlock PT
Running Version 202405141337
[2024-05-24 07:17:13] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2024-05-24 07:17:13] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-24 07:17:13] [INFO ] Load time of PNML (sax parser for PT used): 211 ms
[2024-05-24 07:17:13] [INFO ] Transformed 2501 places.
[2024-05-24 07:17:13] [INFO ] Transformed 4001 transitions.
[2024-05-24 07:17:13] [INFO ] Parsed PT model containing 2501 places and 4001 transitions and 11502 arcs in 330 ms.
Parsed 1 properties from file /home/mcc/execution/ReachabilityDeadlock.xml in 4 ms.
Working with output stream class java.io.PrintStream
Reduce places removed 1 places and 0 transitions.
Built sparse matrix representations for Structural reductions in 8 ms.18436KB memory used
Starting structural reductions in DEADLOCK mode, iteration 0 : 2500/2500 places, 4001/4001 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 527 ms. Remains 2500 /2500 variables (removed 0) and now considering 4001/4001 (removed 0) transitions.
Running 3000 sub problems to find dead transitions.
// Phase 1: matrix 4001 rows 2500 cols
[2024-05-24 07:17:14] [INFO ] Computed 500 invariants in 42 ms
[2024-05-24 07:17:14] [INFO ] State equation strengthened by 500 read => feed constraints.
Error getting values : (error "ParserException while parsing response: ((s0 5.0)
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(s985 5.0)
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(s988 4.0)
(s989 5.0)
(s990 5.0)
(s991 2.0)
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(s995 5.0)
(s996 2.0)
(s998 4.0)
(s999 5.0)
(s1000 5.0)
(s1001 2.0)
(s1003 4.0)
(s1004 5.0)
(s1005 5.0)
(s1006 2.0)
(s1008 4.0)
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(s1010 5.0)
(s1011 2.0)
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(s1014 5.0)
(s1015 5.0)
(s1016 2.0)
(s1018 4.0)
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(s1020 5.0)
(s1021 2.0)
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(s1024 5.0)
(s1025 5.0)
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(s1031 2.0)
(s1033 4.0)
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(s1035 5.0)
(s1036 2.0)
(s1038 4.0)
(s1039 5.0)
(s1040 5.0)
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(s1043 4.0)
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(s1045 5.0)
(s1046 2.0)
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(s1100 5.0)
(s1101 2.0)
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(s1115 5.0)
(s1116 2.0)
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(s1120 5.0)
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(s1145 5.0)
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(s1150 5.0)
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(s1225 5.0)
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(s1250 5.0)
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(s1255 5.0)
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(s1276 2.0)
(s1278 4.0)
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(s1284 5.0)
(s1285 5.0)
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(s1291 2.0)
(s1293 4.0)
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(s1300 5.0)
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(s1304 5.0)
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(s1306 2.0)
(s1308 4.0)
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(s1315 5.0)
(s1316 2.0)
(s1318 4.0)
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(s1320 5.0)
(s1321 2.0)
(s1323 4.0)
(s1324 5.0)
(s1325 5.0)
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(s1335 5.0)
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(s1338 4.0)
(s1339 5.0)
(s1340 5.0)
(s1341 2.0)
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(s1344 5.0)
(s1345 5.0)
(s1346 2.0)
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(s1349 5.0)
(s1350 5.0)
(s1351 2.0)
(s1353 4.0)
(s1354 5.0)
(s1355 5.0)
(s1356 2.0)
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(s1371 2.0)
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(s1376 2.0)
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(s1381 2.0)
(s1383 4.0)
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(s1386 2.0)
(s1388 4.0)
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(s1390 5.0)
(s1391 2.0)
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(s1400 5.0)
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(s1410 5.0)
(s1411 2.0)
(s1413 4.0)
(s1414 5.0)
(s1415 5.0)
(s1416 2.0)
(s1418 4.0)
(s1419 5.0)
(s1420 5.0)
(s1421 2.0)
(s1423 4.0)
(s1424 5.0)
(s1425 5.0)
(s1426 2.0)
(s1428 4.0)
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(s1433 4.0)
(s1434 5.0)
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(s1436 2.0)
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(s1441 2.0)
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(s1445 5.0)
(s1446 2.0)
(s1448 4.0)
(s1449 5.0)
(s1450 5.0)
(s1451 2.0)
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(s1454 5.0)
(s1455 5.0)
(s1456 2.0)
(s1458 4.0)
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(s1461 2.0)
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(s1464 5.0)
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(s1469 5.0)
(s1470 5.0)
(s1471 2.0)
(s1473 4.0)
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(s1475 5.0)
(s1476 2.0)
(s1478 4.0)
(s1479 5.0)
(s1480 5.0)
(s1481 2.0)
(s1483 4.0)
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(s1485 5.0)
(s1486 2.0)
(s1488 4.0)
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(s1490 5.0)
(s1491 2.0)
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(s1499 5.0)
(s1500 5.0)
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(s1508 4.0)
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(s1551 2.0)
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(s1554 5.0)
(s1555 5.0)
(s1556 2.0)
(s1558 4.0)
(s1559 5.0)
(s1560 5.0)
(s1561 2.0)
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(s1564 5.0)
(s1565 5.0)
(s1566 2.0)
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(s1569 5.0)
(s1570 5.0)
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(s1573 4.0)
(s1574 5.0)
(s1575 5.0)
(s1576 2.0)
(s1578 4.0)
(s1579 5.0)
(s1580 5.0)
(s1581 2.0)
(s1583 4.0)
(s1584 5.0)
(s1585 5.0)
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(s1589 5.0)
(s1590 5.0)
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(s1599 5.0)
(s1600 5.0)
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(s1604 5.0)
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(s1606 2.0)
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(s1616 2.0)
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(s1619 5.0)
(s1620 5.0)
(s1621 2.0)
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(s1624 5.0)
(s1625 5.0)
(s1626 2.0)
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(s1629 5.0)
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(s1631 2.0)
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(s1634 5.0)
(s1635 5.0)
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(s1645 5.0)
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(s1649 5.0)
(s1650 5.0)
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(s1655 5.0)
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(s1691 2.0)
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(s1695 5.0)
(s1696 2.0)
(s1698 4.0)
(s1699 5.0)
(s1700 5.0)
(s1701 2.0)
(s1703 4.0)
(s1704 5.0)
(s1705 5.0)
(s1706 2.0)
(s1708 4.0)
(s1709 5.0)
(s1710 5.0)
(s1711 2.0)
(s1713 4.0)
(s1714 5.0)
(s1715 5.0)
(s1716 2.0)
(s1718 4.0)
(s1719 5.0)
(s1720 5.0)
(s1721 2.0)
(s1723 4.0)
(s1724 5.0)
(s1725 5.0)
(s1726 2.0)
(s1728 4.0)
(s1729 5.0)
(s1730 5.0)
(s1731 2.0)
(s1733 4.0)
(s1734 5.0)
(s1735 5.0)
(s1736 2.0)
(s1738 4.0)
(s1739 5.0)
(s1740 5.0)
(s1741 2.0)
(s1743 4.0)
(s1744 5.0)
(s1745 5.0)
(s1746 2.0)
(s1748 4.0)
(s1749 5.0)
(s1750 5.0)
(s1751 2.0)
(s1753 4.0)
(s1754 5.0)
(s1755 5.0)
(s1756 2.0)
(s1758 4.0)
(s1759 5.0)
(s1760 5.0)
(s1761 2.0)
(s1763 4.0)
(s1764 5.0)
(s1765 5.0)
(s1766 2.0)
(s1768 4.0)
(s1769 5.0)
(s1770 5.0)
(s1771 2.0)
(s1773 4.0)
(s1774 5.0)
(s1775 5.0)
(s1776 2.0)
(s1778 4.0)
(s1779 5.0)
(s1780 5.0)
(s1781 2.0)
(s1783 4.0)
(s1784 5.0)
(s1785 5.0)
(s1786 2.0)
(s1788 4.0)
(s1789 5.0)
(s1790 5.0)
(s1791 2.0)
(s1793 4.0)
(s1794 5.0)
(s1795 timeout
5.0)
(s1796 org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 2000/6501 variables, and 0 constraints, problems are : Problem set: 0 solved, 3000 unsolved in 20100 ms.
Refiners :[Positive P Invariants (semi-flows): 0/500 constraints, State Equation: 0/2500 constraints, ReadFeed: 0/500 constraints, PredecessorRefiner: 3000/3000 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 3000 unsolved
Error getting values : (error "ParserException while parsing response: ((s0 5)
(s1 2)
(s3 4)
(s4 5)
(s5 5)
(s6 2)
(s8 4)
(s9 5)
(s10 5)
(s11 2)
(s13 4)
(s14 5)
(s15 5)
(s16 2)
(s18 4)
(s19 5)
(s20 5)
(s21 2)
(s23 4)
(s24 5)
(s25 5)
(s26 2)
(s28 4)
(s29 5)
(s30 5)
(s31 2)
(s33 4)
(s34 5)
(s35 5)
(s36 2)
(s38 4)
(s39 5)
(s40 5)
(s41 2)
(s43 4)
(s44 5)
(s45 5)
(s46 2)
(s48 4)
(s49 5)
(s50 5)
(s51 2)
(s53 4)
(s54 5)
(s55 5)
(s56 2)
(s58 4)
(s59 5)
(s60 5)
(s61 2)
(s63 4)
(s64 5)
(s65 5)
(s66 2)
(s68 4)
(s69 5)
(s70 5)
(s71 2)
(s73 4)
(s74 5)
(s75 5)
(s76 2)
(s78 4)
(s79 5)
(s80 5)
(s81 2)
(s83 4)
(s84 5)
(s85 5)
(s86 2)
(s88 4)
(s89 5)
(s90 5)
(s91 2)
(s93 4)
(s94 5)
(s95 5)
(s96 2)
(s98 4)
(s99 5)
(s100 5)
(s101 2)
(s103 4)
(s104 5)
(s105 5)
(s106 2)
(s108 4)
(s109 5)
(s110 5)
(s111 2)
(s113 4)
(s114 5)
(s115 5)
(s116 2)
(s118 4)
(s119 5)
(s120 5)
(s121 2)
(s123 4)
(s124 5)
(s125 5)
(s126 2)
(s128 4)
(s129 5)
(s130 5)
(s131 2)
(s133 4)
(s134 5)
(s135 5)
(s136 2)
(s138 4)
(s139 5)
(s140 5)
(s141 2)
(s143 4)
(s144 5)
(s145 5)
(s146 2)
(s148 4)
(s149 5)
(s150 5)
(s151 2)
(s153 4)
(s154 5)
(s155 5)
(s156 2)
(s158 4)
(s159 5)
(s160 5)
(s161 2)
(s163 4)
(s164 5)
(s165 5)
(s166 2)
(s168 4)
(s169 5)
(s170 5)
(s171 2)
(s173 4)
(s174 5)
(s175 5)
(s176 2)
(s178 4)
(s179 5)
(s180 5)
(s181 2)
(s183 4)
(s184 5)
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(s1554 5)
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(s1556 2)
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(s1793 timeout
org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 2000/6501 variables, and 0 constraints, problems are : Problem set: 0 solved, 3000 unsolved in 20045 ms.
Refiners :[Positive P Invariants (semi-flows): 0/500 constraints, State Equation: 0/2500 constraints, ReadFeed: 0/500 constraints, PredecessorRefiner: 0/3000 constraints, Known Traps: 0/0 constraints]
After SMT, in 41560ms problems are : Problem set: 0 solved, 3000 unsolved
Search for dead transitions found 0 dead transitions in 41634ms
Finished structural reductions in DEADLOCK mode , in 1 iterations and 42220 ms. Remains : 2500/2500 places, 4001/4001 transitions.
Starting structural reductions in DEADLOCK mode, iteration 0 : 2500/2500 places, 4001/4001 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 224 ms. Remains 2500 /2500 variables (removed 0) and now considering 4001/4001 (removed 0) transitions.
[2024-05-24 07:17:56] [INFO ] Invariant cache hit.
[2024-05-24 07:17:56] [INFO ] Implicit Places using invariants in 457 ms returned []
[2024-05-24 07:17:56] [INFO ] Invariant cache hit.
[2024-05-24 07:17:58] [INFO ] State equation strengthened by 500 read => feed constraints.
[2024-05-24 07:17:58] [INFO ] Implicit Places using invariants and state equation in 1576 ms returned []
Implicit Place search using SMT with State Equation took 2038 ms to find 0 implicit places.
[2024-05-24 07:17:58] [INFO ] Redundant transitions in 277 ms returned []
Running 3000 sub problems to find dead transitions.
[2024-05-24 07:17:58] [INFO ] Invariant cache hit.
[2024-05-24 07:17:58] [INFO ] State equation strengthened by 500 read => feed constraints.
Error getting values : (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 2000/6501 variables, and 0 constraints, problems are : Problem set: 0 solved, 3000 unsolved in 30038 ms.
Refiners :[Positive P Invariants (semi-flows): 0/500 constraints, State Equation: 0/2500 constraints, ReadFeed: 0/500 constraints, PredecessorRefiner: 3000/3000 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 3000 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 2000/6501 variables, and 0 constraints, problems are : Problem set: 0 solved, 3000 unsolved in 30050 ms.
Refiners :[Positive P Invariants (semi-flows): 0/500 constraints, State Equation: 0/2500 constraints, ReadFeed: 0/500 constraints, PredecessorRefiner: 0/3000 constraints, Known Traps: 0/0 constraints]
After SMT, in 61455ms problems are : Problem set: 0 solved, 3000 unsolved
Search for dead transitions found 0 dead transitions in 61488ms
Finished structural reductions in DEADLOCK mode , in 1 iterations and 64046 ms. Remains : 2500/2500 places, 4001/4001 transitions.
Interrupted Random walk after 1078492 steps, including 0 resets, run timeout after 30003 ms. (steps per millisecond=35 )
Interrupted Random directed walk after 413960 steps, including 0 resets, run timeout after 30043 ms. (steps per millisecond=13 )
[2024-05-24 07:20:00] [INFO ] Invariant cache hit.
[2024-05-24 07:20:00] [INFO ] [Real]Absence check using 500 positive place invariants in 2 ms returned unsat
FORMULA ReachabilityDeadlock FALSE TECHNIQUES TOPOLOGICAL SAT_SMT STRUCTURAL_REDUCTION
Total runtime 167352 ms.

BK_STOP 1716535200824

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityDeadlock = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="JoinFreeModules-PT-0500"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is JoinFreeModules-PT-0500, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r233-tall-171649622400041"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/JoinFreeModules-PT-0500.tgz
mv JoinFreeModules-PT-0500 execution
cd execution
if [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "UpperBounds" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] || [ "ReachabilityDeadlock" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityDeadlock"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;