Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r136-tall-171631132300302.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is Diffusion2D-PT-D40N010, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r136-tall-171631132300302
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 5.1M
-rw-r--r-- 1 mcc users 8.2K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 73K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.2K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 47K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:42 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.3K May 18 16:42 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.2K Apr 22 14:40 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Apr 22 14:40 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K Apr 22 14:40 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K Apr 22 14:40 LTLFireability.xml
-rw-r--r-- 1 mcc users 14K Apr 11 14:16 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 118K Apr 11 14:16 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 10K Apr 11 14:16 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 70K Apr 11 14:16 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Apr 22 14:40 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K Apr 22 14:40 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:42 equiv_col
-rw-r--r-- 1 mcc users 8 May 18 16:42 instance
-rw-r--r-- 1 mcc users 6 May 18 16:42 iscolored
-rw-r--r-- 1 mcc users 4.7M May 18 16:42 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-00
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-01
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-02
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-03
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-04
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-05
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-06
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-07
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-08
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-09
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-10
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-11
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-12
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-13
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-14
FORMULA_NAME Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-15

=== Now, execution of the tool begins

BK_START 1716361248048

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Diffusion2D-PT-D40N010
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
ReachabilityCardinality PT
Running Version 202405141337
[2024-05-22 07:00:49] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-05-22 07:00:49] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-22 07:00:49] [INFO ] Load time of PNML (sax parser for PT used): 395 ms
[2024-05-22 07:00:49] [INFO ] Transformed 1600 places.
[2024-05-22 07:00:49] [INFO ] Transformed 12324 transitions.
[2024-05-22 07:00:49] [INFO ] Parsed PT model containing 1600 places and 12324 transitions and 24648 arcs in 528 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityCardinality.xml in 19 ms.
Working with output stream class java.io.PrintStream
RANDOM walk for 40016 steps (8 resets) in 1176 ms. (33 steps per ms) remains 10/16 properties
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-11 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-10 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-09 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-08 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-07 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-05 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
BEST_FIRST walk for 40004 steps (8 resets) in 279 ms. (142 steps per ms) remains 10/10 properties
BEST_FIRST walk for 40004 steps (8 resets) in 780 ms. (51 steps per ms) remains 10/10 properties
BEST_FIRST walk for 40004 steps (8 resets) in 214 ms. (186 steps per ms) remains 10/10 properties
BEST_FIRST walk for 40004 steps (8 resets) in 651 ms. (61 steps per ms) remains 10/10 properties
BEST_FIRST walk for 40004 steps (8 resets) in 553 ms. (72 steps per ms) remains 10/10 properties
BEST_FIRST walk for 40003 steps (8 resets) in 160 ms. (248 steps per ms) remains 10/10 properties
BEST_FIRST walk for 40004 steps (8 resets) in 73 ms. (540 steps per ms) remains 10/10 properties
BEST_FIRST walk for 40004 steps (8 resets) in 66 ms. (597 steps per ms) remains 10/10 properties
BEST_FIRST walk for 40004 steps (8 resets) in 103 ms. (384 steps per ms) remains 10/10 properties
BEST_FIRST walk for 40004 steps (8 resets) in 103 ms. (384 steps per ms) remains 10/10 properties
[2024-05-22 07:00:51] [INFO ] Flatten gal took : 891 ms
// Phase 1: matrix 12324 rows 1600 cols
[2024-05-22 07:00:51] [INFO ] Computed 1 invariants in 122 ms
[2024-05-22 07:00:51] [INFO ] Flatten gal took : 268 ms
[2024-05-22 07:00:51] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality10330779535696059052.gal : 338 ms
[2024-05-22 07:00:51] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality17121074508543289377.prop : 3 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality10330779535696059052.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality17121074508543289377.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...330
All remaining problems are real, not stopping.
At refinement iteration 0 (INCLUDED_ONLY) 0/235 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 10 unsolved
Problem Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-06 is UNSAT
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-06 FALSE TECHNIQUES SMT_REFINEMENT
At refinement iteration 1 (OVERLAPS) 1365/1600 variables, 1/1 constraints. Problems are: Problem set: 1 solved, 9 unsolved
Loading property file /tmp/ReachabilityCardinality17121074508543289377.prop.
At refinement iteration 2 (INCLUDED_ONLY) 0/1600 variables, 0/1 constraints. Problems are: Problem set: 1 solved, 9 unsolved
At refinement iteration 3 (OVERLAPS) 12324/13924 variables, 1600/1601 constraints. Problems are: Problem set: 1 solved, 9 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 13924/13924 variables, and 1601 constraints, problems are : Problem set: 1 solved, 9 unsolved in 5088 ms.
Refiners :[Positive P Invariants (semi-flows): 1/1 constraints, State Equation: 1600/1600 constraints, PredecessorRefiner: 10/9 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 1 solved, 9 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/193 variables, 0/0 constraints. Problems are: Problem set: 1 solved, 9 unsolved
At refinement iteration 1 (OVERLAPS) 1407/1600 variables, 1/1 constraints. Problems are: Problem set: 1 solved, 9 unsolved
At refinement iteration 2 (INCLUDED_ONLY) 0/1600 variables, 0/1 constraints. Problems are: Problem set: 1 solved, 9 unsolved
At refinement iteration 3 (OVERLAPS) 12324/13924 variables, 1600/1601 constraints. Problems are: Problem set: 1 solved, 9 unsolved
Solver is answering 'unknown', stopping.
After SMT solving in domain Int declared 13924/13924 variables, and 1609 constraints, problems are : Problem set: 1 solved, 9 unsolved in 5093 ms.
Refiners :[Positive P Invariants (semi-flows): 1/1 constraints, State Equation: 1600/1600 constraints, PredecessorRefiner: 9/9 constraints, Known Traps: 0/0 constraints]
After SMT, in 10730ms problems are : Problem set: 1 solved, 9 unsolved
Skipping Parikh replay, no witness traces provided.
Support contains 193 out of 1600 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 1600/1600 places, 12324/12324 transitions.
Graph (trivial) has 9570 edges and 1600 vertex of which 1407 / 1600 are part of one of the 1 SCC in 17 ms
Free SCC test removed 1406 places
Drop transitions (Empty/Sink Transition effects.) removed 9570 transitions
Ensure Unique test removed 2196 transitions
Reduce isomorphic transitions removed 11766 transitions.
Drop transitions (Redundant composition of simpler transitions.) removed 201 transitions
Redundant transition composition rules discarded 201 transitions
Iterating global reduction 0 with 201 rules applied. Total rules applied 202 place count 194 transition count 357
Applied a total of 202 rules in 127 ms. Remains 194 /1600 variables (removed 1406) and now considering 357/12324 (removed 11967) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 136 ms. Remains : 194/1600 places, 357/12324 transitions.
RANDOM walk for 40016 steps (8 resets) in 423 ms. (94 steps per ms) remains 3/9 properties
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-15 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-14 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-13 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-12 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-03 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-00 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
BEST_FIRST walk for 40004 steps (8 resets) in 1315 ms. (30 steps per ms) remains 2/3 properties
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-01 FALSE TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
BEST_FIRST walk for 40004 steps (8 resets) in 45 ms. (869 steps per ms) remains 1/2 properties
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-02 FALSE TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
BEST_FIRST walk for 40004 steps (8 resets) in 309 ms. (129 steps per ms) remains 1/1 properties
// Phase 1: matrix 357 rows 194 cols
[2024-05-22 07:01:02] [INFO ] Computed 1 invariants in 5 ms
All remaining problems are real, not stopping.
At refinement iteration 0 (INCLUDED_ONLY) 0/61 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 1 (OVERLAPS) 133/194 variables, 1/1 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 2 (INCLUDED_ONLY) 0/194 variables, 0/1 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 3 (OVERLAPS) 357/551 variables, 194/195 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/551 variables, 0/195 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 5 (OVERLAPS) 0/551 variables, 0/195 constraints. Problems are: Problem set: 0 solved, 1 unsolved
No progress, stopping.
After SMT solving in domain Real declared 551/551 variables, and 195 constraints, problems are : Problem set: 0 solved, 1 unsolved in 286 ms.
Refiners :[Positive P Invariants (semi-flows): 1/1 constraints, State Equation: 194/194 constraints, PredecessorRefiner: 1/1 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 1 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/61 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 1 (OVERLAPS) 133/194 variables, 1/1 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 2 (INCLUDED_ONLY) 0/194 variables, 0/1 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 3 (OVERLAPS) 357/551 variables, 194/195 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/551 variables, 1/196 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/551 variables, 0/196 constraints. Problems are: Problem set: 0 solved, 1 unsolved
At refinement iteration 6 (OVERLAPS) 0/551 variables, 0/196 constraints. Problems are: Problem set: 0 solved, 1 unsolved
No progress, stopping.
After SMT solving in domain Int declared 551/551 variables, and 196 constraints, problems are : Problem set: 0 solved, 1 unsolved in 221 ms.
Refiners :[Positive P Invariants (semi-flows): 1/1 constraints, State Equation: 194/194 constraints, PredecessorRefiner: 1/1 constraints, Known Traps: 0/0 constraints]
After SMT, in 559ms problems are : Problem set: 0 solved, 1 unsolved
Finished Parikh walk after 20 steps, including 0 resets, run visited all 1 properties in 1 ms. (steps per millisecond=20 )
FORMULA Diffusion2D-PT-D40N010-ReachabilityCardinality-2024-04 TRUE TECHNIQUES PARIKH_WALK
Parikh walk visited 1 properties in 21 ms.
ITS runner timed out or was interrupted.
ITS tools runner thread asked to quit. Dying gracefully.
All properties solved without resorting to model-checking.
Total runtime 14272 ms.

BK_STOP 1716361263478

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Diffusion2D-PT-D40N010"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is Diffusion2D-PT-D40N010, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r136-tall-171631132300302"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Diffusion2D-PT-D40N010.tgz
mv Diffusion2D-PT-D40N010 execution
cd execution
if [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "UpperBounds" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] || [ "ReachabilityCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;