Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r136-tall-171631131800032.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is DatabaseWithMutex-COL-20, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r136-tall-171631131800032
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 476K
-rw-r--r-- 1 mcc users 6.1K Apr 11 18:44 CTLCardinality.txt
-rw-r--r-- 1 mcc users 56K Apr 11 18:44 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.6K Apr 11 18:31 CTLFireability.txt
-rw-r--r-- 1 mcc users 57K Apr 11 18:31 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:42 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.1K Apr 22 14:39 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Apr 22 14:39 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K Apr 22 14:39 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K Apr 22 14:39 LTLFireability.xml
-rw-r--r-- 1 mcc users 12K Apr 11 20:13 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 113K Apr 11 20:13 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 9.6K Apr 11 19:41 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 76K Apr 11 19:41 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Apr 22 14:39 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Apr 22 14:39 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 18 16:42 equiv_pt
-rw-r--r-- 1 mcc users 3 May 18 16:42 instance
-rw-r--r-- 1 mcc users 5 May 18 16:42 iscolored
-rw-r--r-- 1 mcc users 38K May 18 16:42 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1716329298213

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=DatabaseWithMutex-COL-20
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is COL
StateSpace COL
Running Version 202405141337
[2024-05-21 22:08:19] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-05-21 22:08:19] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-21 22:08:19] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[2024-05-21 22:08:19] [WARNING] Using fallBack plugin, rng conformance not checked
[2024-05-21 22:08:20] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 575 ms
[2024-05-21 22:08:20] [INFO ] Imported 11 HL places and 8 HL transitions for a total of 3260 PT places and 3200.0 transition bindings in 17 ms.
[2024-05-21 22:08:20] [INFO ] Unfolded HLPN to a Petri net with 3260 places and 3200 transitions 23200 arcs in 85 ms.
[2024-05-21 22:08:20] [INFO ] Unfolded 0 HLPN properties in 0 ms.
Starting structural reductions in STATESPACE mode, iteration 0 : 3260/3260 places, 3200/3200 transitions.
[2024-05-21 22:08:20] [INFO ] Redundant transitions in 199 ms returned []
Running 2800 sub problems to find dead transitions.
// Phase 1: matrix 3200 rows 3260 cols
[2024-05-21 22:08:20] [INFO ] Computed 460 invariants in 188 ms
Error getting values : (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")
At refinement iteration 0 (INCLUDED_ONLY) 0/3240 variables, 39/39 constraints. Problems are: Problem set: 0 solved, 2800 unsolved
SMT process timed out in 32805ms, After SMT, problems are : Problem set: 0 solved, 2800 unsolved
Search for dead transitions found 0 dead transitions in 32930ms
Finished structural reductions in STATESPACE mode , in 1 iterations and 33315 ms. Remains : 3260/3260 places, 3200/3200 transitions.
Final net has 3260 places and 3200 transitions.
[2024-05-21 22:08:54] [INFO ] Flatten gal took : 577 ms
[2024-05-21 22:08:54] [INFO ] Applying decomposition
[2024-05-21 22:08:55] [INFO ] Flatten gal took : 259 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/convert-linux64' '-i' '/tmp/graph247610997508070969.txt' '-o' '/tmp/graph247610997508070969.bin' '-w' '/tmp/graph247610997508070969.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/louvain-linux64' '/tmp/graph247610997508070969.bin' '-l' '-1' '-v' '-w' '/tmp/graph247610997508070969.weights' '-q' '0' '-e' '0.001'
[2024-05-21 22:08:55] [INFO ] Decomposing Gal with order
[2024-05-21 22:08:55] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-05-21 22:08:56] [INFO ] Removed a total of 14780 redundant transitions.
[2024-05-21 22:08:57] [INFO ] Flatten gal took : 716 ms
[2024-05-21 22:08:57] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 125 ms.
[2024-05-21 22:08:57] [INFO ] Time to serialize gal into /tmp/StateSpace3559324056011831007.gal : 68 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace3559324056011831007.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
ITS-tools command line returned an error code 137
[2024-05-21 22:16:41] [INFO ] Applying decomposition
[2024-05-21 22:16:42] [INFO ] Flatten gal took : 182 ms
[2024-05-21 22:16:42] [INFO ] Decomposing Gal with order
[2024-05-21 22:16:42] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-05-21 22:16:42] [INFO ] Removed a total of 16680 redundant transitions.
[2024-05-21 22:16:43] [INFO ] Flatten gal took : 355 ms
[2024-05-21 22:16:43] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 74 ms.
[2024-05-21 22:16:43] [INFO ] Time to serialize gal into /tmp/StateSpace10477583216935995126.gal : 40 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace10477583216935995126.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...220
ITS-tools command line returned an error code 137
[2024-05-21 22:24:56] [INFO ] Flatten gal took : 196 ms
[2024-05-21 22:24:56] [INFO ] Input system was already deterministic with 3200 transitions.
[2024-05-21 22:24:57] [INFO ] Transformed 3260 places.
[2024-05-21 22:24:57] [INFO ] Transformed 3200 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2024-05-21 22:25:27] [INFO ] Time to serialize gal into /tmp/StateSpace4126980332657451906.gal : 36 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace4126980332657451906.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...285
Successfully loaded order from file /home/mcc/execution/model.ord
ITS-tools command line returned an error code 137
Total runtime 1617632 ms.

BK_STOP 1716330917130

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
++ perl -pe 's/.*\.//g'
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DatabaseWithMutex-COL-20"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is DatabaseWithMutex-COL-20, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r136-tall-171631131800032"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/DatabaseWithMutex-COL-20.tgz
mv DatabaseWithMutex-COL-20 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;