About the Execution of ITS-Tools for DNAwalker-PT-18lozangeBlock
| Execution Summary | |||||
| Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
| 0.000 | 410316.00 | 0.00 | 0.00 | [undef] | Cannot compute |
Execution Chart
Sorry, for this execution, no execution chart could be reported.
Trace from the execution
Formatting '/data/fkordon/mcc2024-input.r114-smll-171624276100512.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is DNAwalker-PT-18lozangeBlock, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r114-smll-171624276100512
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 2.1M
-rw-r--r-- 1 mcc users 7.1K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 78K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 7.7K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 74K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:42 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.7K May 19 07:08 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K May 19 15:45 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 19 07:16 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 19 18:13 LTLFireability.xml
-rw-r--r-- 1 mcc users 12K May 14 13:22 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 126K May 14 13:22 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 12K May 14 13:22 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 100K May 14 13:22 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 19 07:10 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 19 15:24 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:42 equiv_col
-rw-r--r-- 1 mcc users 15 May 18 16:42 instance
-rw-r--r-- 1 mcc users 6 May 18 16:42 iscolored
-rw-r--r-- 1 mcc users 1.6M May 18 16:42 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
no data necessary for post analysis
=== Now, execution of the tool begins
BK_START 1716539360748
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=DNAwalker-PT-18lozangeBlock
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202405141337
[2024-05-24 08:29:23] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-05-24 08:29:23] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-24 08:29:23] [INFO ] Load time of PNML (sax parser for PT used): 575 ms
[2024-05-24 08:29:23] [INFO ] Transformed 164 places.
[2024-05-24 08:29:24] [INFO ] Transformed 3697 transitions.
[2024-05-24 08:29:24] [INFO ] Parsed PT model containing 164 places and 3697 transitions and 10898 arcs in 834 ms.
Reduce redundant transitions removed 1 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 164/164 places, 3696/3696 transitions.
Running 3562 sub problems to find dead transitions.
// Phase 1: matrix 3696 rows 164 cols
[2024-05-24 08:29:24] [INFO ] Computed 0 invariants in 83 ms
[2024-05-24 08:29:25] [INFO ] State equation strengthened by 2650 read => feed constraints.
Error getting values : (error "ParserException while parsing response: (timeout
org.smtlib.IParser$ParserException: Unbalanced parentheses at end of input")
Solver is answering 'unknown', stopping.
After SMT solving in domain Real declared 100/3860 variables, and 0 constraints, problems are : Problem set: 0 solved, 3562 unsolved in 20261 ms.
Refiners :[State Equation: 0/164 constraints, ReadFeed: 0/2650 constraints, PredecessorRefiner: 3562/3562 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 3562 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/100 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 3562 unsolved
SMT process timed out in 51425ms, After SMT, problems are : Problem set: 0 solved, 3562 unsolved
Search for dead transitions found 0 dead transitions in 51591ms
[2024-05-24 08:30:16] [INFO ] Redundant transitions in 583 ms returned []
Running 3562 sub problems to find dead transitions.
[2024-05-24 08:30:16] [INFO ] Invariant cache hit.
[2024-05-24 08:30:16] [INFO ] State equation strengthened by 2650 read => feed constraints.
At refinement iteration 0 (INCLUDED_ONLY) 0/100 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 3562 unsolved
SMT process timed out in 40701ms, After SMT, problems are : Problem set: 0 solved, 3562 unsolved
Search for dead transitions found 0 dead transitions in 40745ms
Finished structural reductions in STATESPACE mode , in 1 iterations and 93303 ms. Remains : 164/164 places, 3696/3696 transitions.
Final net has 164 places and 3696 transitions.
[2024-05-24 08:30:58] [INFO ] Flatten gal took : 552 ms
[2024-05-24 08:30:58] [INFO ] Applying decomposition
[2024-05-24 08:30:58] [INFO ] Flatten gal took : 163 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/convert-linux64' '-i' '/tmp/graph1029824875903530732.txt' '-o' '/tmp/graph1029824875903530732.bin' '-w' '/tmp/graph1029824875903530732.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/louvain-linux64' '/tmp/graph1029824875903530732.bin' '-l' '-1' '-v' '-w' '/tmp/graph1029824875903530732.weights' '-q' '0' '-e' '0.001'
[2024-05-24 08:30:59] [INFO ] Decomposing Gal with order
[2024-05-24 08:30:59] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-05-24 08:30:59] [INFO ] Removed a total of 6937 redundant transitions.
[2024-05-24 08:30:59] [INFO ] Flatten gal took : 471 ms
[2024-05-24 08:31:00] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 44 ms.
[2024-05-24 08:31:00] [INFO ] Time to serialize gal into /tmp/StateSpace3247875338208196598.gal : 78 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace3247875338208196598.gal' '-t' 'CGAL' '--stats'
its-reach command run as :
/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
BK_STOP 1716539771064
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DNAwalker-PT-18lozangeBlock"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is DNAwalker-PT-18lozangeBlock, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r114-smll-171624276100512"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/DNAwalker-PT-18lozangeBlock.tgz
mv DNAwalker-PT-18lozangeBlock execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;