Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r092-tall-171624189100368.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
................
=====================================================================
Generated by BenchKit 2-5568
Executing tool itstools
Input is CryptoMiner-PT-D03N000, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r092-tall-171624189100368
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 660K
-rw-r--r-- 1 mcc users 12K Apr 12 12:39 CTLCardinality.txt
-rw-r--r-- 1 mcc users 94K Apr 12 12:39 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.7K Apr 12 12:37 CTLFireability.txt
-rw-r--r-- 1 mcc users 54K Apr 12 12:37 CTLFireability.xml
-rw-r--r-- 1 mcc users 6.6K Apr 22 14:35 LTLCardinality.txt
-rw-r--r-- 1 mcc users 36K Apr 22 14:35 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K Apr 22 14:35 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K Apr 22 14:35 LTLFireability.xml
-rw-r--r-- 1 mcc users 23K Apr 12 12:41 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 181K Apr 12 12:41 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 20K Apr 12 12:40 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 161K Apr 12 12:40 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.1K Apr 22 14:35 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.6K Apr 22 14:35 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 18 16:42 equiv_col
-rw-r--r-- 1 mcc users 8 May 18 16:42 instance
-rw-r--r-- 1 mcc users 6 May 18 16:42 iscolored
-rw-r--r-- 1 mcc users 3.5K May 18 16:42 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1716303596193

Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=CryptoMiner-PT-D03N000
BK_MEMORY_CONFINEMENT=16384
Not applying reductions.
Model is PT
StateSpace PT
Running Version 202405141337
[2024-05-21 14:59:57] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2024-05-21 14:59:57] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-21 14:59:57] [INFO ] Load time of PNML (sax parser for PT used): 23 ms
[2024-05-21 14:59:57] [INFO ] Transformed 8 places.
[2024-05-21 14:59:57] [INFO ] Transformed 8 transitions.
[2024-05-21 14:59:57] [INFO ] Parsed PT model containing 8 places and 8 transitions and 22 arcs in 112 ms.
Starting structural reductions in STATESPACE mode, iteration 0 : 8/8 places, 8/8 transitions.
[2024-05-21 14:59:57] [INFO ] Redundant transitions in 0 ms returned []
Running 6 sub problems to find dead transitions.
// Phase 1: matrix 8 rows 8 cols
[2024-05-21 14:59:57] [INFO ] Computed 0 invariants in 9 ms
[2024-05-21 14:59:57] [INFO ] State equation strengthened by 3 read => feed constraints.
At refinement iteration 0 (INCLUDED_ONLY) 0/6 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 1 (OVERLAPS) 8/14 variables, 6/6 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 2 (INCLUDED_ONLY) 0/14 variables, 3/9 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/14 variables, 0/9 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 4 (OVERLAPS) 2/16 variables, 2/11 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/16 variables, 0/11 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 6 (OVERLAPS) 0/16 variables, 0/11 constraints. Problems are: Problem set: 0 solved, 6 unsolved
No progress, stopping.
After SMT solving in domain Real declared 16/16 variables, and 11 constraints, problems are : Problem set: 0 solved, 6 unsolved in 152 ms.
Refiners :[State Equation: 8/8 constraints, ReadFeed: 3/3 constraints, PredecessorRefiner: 6/6 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 6 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/6 variables, 0/0 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 1 (OVERLAPS) 8/14 variables, 6/6 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 2 (INCLUDED_ONLY) 0/14 variables, 3/9 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/14 variables, 4/13 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 4 (INCLUDED_ONLY) 0/14 variables, 0/13 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 5 (OVERLAPS) 2/16 variables, 2/15 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 6 (INCLUDED_ONLY) 0/16 variables, 2/17 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 7 (INCLUDED_ONLY) 0/16 variables, 0/17 constraints. Problems are: Problem set: 0 solved, 6 unsolved
At refinement iteration 8 (OVERLAPS) 0/16 variables, 0/17 constraints. Problems are: Problem set: 0 solved, 6 unsolved
No progress, stopping.
After SMT solving in domain Int declared 16/16 variables, and 17 constraints, problems are : Problem set: 0 solved, 6 unsolved in 88 ms.
Refiners :[State Equation: 8/8 constraints, ReadFeed: 3/3 constraints, PredecessorRefiner: 6/6 constraints, Known Traps: 0/0 constraints]
After SMT, in 290ms problems are : Problem set: 0 solved, 6 unsolved
Search for dead transitions found 0 dead transitions in 298ms
Finished structural reductions in STATESPACE mode , in 1 iterations and 378 ms. Remains : 8/8 places, 8/8 transitions.
Final net has 8 places and 8 transitions.
[2024-05-21 14:59:57] [INFO ] Flatten gal took : 14 ms
[2024-05-21 14:59:57] [INFO ] Applying decomposition
[2024-05-21 14:59:57] [INFO ] Flatten gal took : 2 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/convert-linux64' '-i' '/tmp/graph744490794261360264.txt' '-o' '/tmp/graph744490794261360264.bin' '-w' '/tmp/graph744490794261360264.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202405141337/bin/louvain-linux64' '/tmp/graph744490794261360264.bin' '-l' '-1' '-v' '-w' '/tmp/graph744490794261360264.weights' '-q' '0' '-e' '0.001'
[2024-05-21 14:59:58] [INFO ] Decomposing Gal with order
[2024-05-21 14:59:58] [INFO ] Rewriting arrays to variables to allow decomposition.
[2024-05-21 14:59:58] [INFO ] Flatten gal took : 27 ms
[2024-05-21 14:59:58] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 0 ms.
[2024-05-21 14:59:58] [INFO ] Time to serialize gal into /tmp/StateSpace9565699140967713202.gal : 2 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace9565699140967713202.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Detected timeout of ITS tools.
[2024-05-21 15:19:58] [INFO ] Flatten gal took : 4 ms
[2024-05-21 15:19:58] [INFO ] Time to serialize gal into /tmp/StateSpace4411429940035520457.gal : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace4411429940035520457.gal' '-t' 'CGAL' '--stats' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...240
Detected timeout of ITS tools.
[2024-05-21 15:39:58] [INFO ] Flatten gal took : 7 ms
[2024-05-21 15:39:58] [INFO ] Input system was already deterministic with 8 transitions.
[2024-05-21 15:39:58] [INFO ] Transformed 8 places.
[2024-05-21 15:39:58] [INFO ] Transformed 8 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2024-05-21 15:39:58] [INFO ] Time to serialize gal into /tmp/StateSpace18371741652898973846.gal : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace18371741652898973846.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202405141337/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...286
Successfully loaded order from file /home/mcc/execution/model.ord

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="CryptoMiner-PT-D03N000"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool itstools"
echo " Input is CryptoMiner-PT-D03N000, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r092-tall-171624189100368"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/CryptoMiner-PT-D03N000.tgz
mv CryptoMiner-PT-D03N000 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;