Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r044-smll-171620180600028.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.......................................................................................................................................................................................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-5568
Executing tool gold2023
Input is Angiogenesis-PT-25, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r044-smll-171620180600028
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 508K
-rw-r--r-- 1 mcc users 7.9K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 77K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.0K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 46K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:42 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.1K Apr 22 14:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Apr 22 14:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K Apr 22 14:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K Apr 22 14:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 17K Apr 11 19:30 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 155K Apr 11 19:30 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 7.2K Apr 11 19:29 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 60K Apr 11 19:29 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Apr 22 14:27 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Apr 22 14:27 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:42 equiv_col
-rw-r--r-- 1 mcc users 3 May 18 16:42 instance
-rw-r--r-- 1 mcc users 6 May 18 16:42 iscolored
-rw-r--r-- 1 mcc users 33K May 18 16:42 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1716270999085

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=gold2023
BK_EXAMINATION=StableMarking
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=Angiogenesis-PT-25
Not applying reductions.
Model is PT
StableMarking PT
Running Version 202304061127
[2024-05-21 05:56:42] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2024-05-21 05:56:42] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-21 05:56:42] [INFO ] Load time of PNML (sax parser for PT used): 52 ms
[2024-05-21 05:56:42] [INFO ] Transformed 39 places.
[2024-05-21 05:56:42] [INFO ] Transformed 64 transitions.
[2024-05-21 05:56:42] [INFO ] Parsed PT model containing 39 places and 64 transitions and 185 arcs in 177 ms.
Incomplete random walk after 10000 steps, including 2 resets, run finished after 168 ms. (steps per millisecond=59 ) properties (out of 39) seen :24
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 11 ms. (steps per millisecond=91 ) properties (out of 15) seen :3
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 10 ms. (steps per millisecond=100 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 10 ms. (steps per millisecond=100 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 9 ms. (steps per millisecond=111 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 10 ms. (steps per millisecond=100 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 10 ms. (steps per millisecond=100 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=166 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=166 ) properties (out of 12) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 12) seen :0
Running SMT prover for 12 properties.
// Phase 1: matrix 64 rows 39 cols
[2024-05-21 05:56:43] [INFO ] Computed 8 invariants in 6 ms
[2024-05-21 05:56:43] [INFO ] Flatten gal took : 48 ms
[2024-05-21 05:56:43] [INFO ] Flatten gal took : 14 ms
[2024-05-21 05:56:43] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality6577395807765209859.gal : 13 ms
[2024-05-21 05:56:43] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality15497913404964593277.prop : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202304061127/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality6577395807765209859.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality15497913404964593277.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202304061127/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality15497913404964593277.prop.
SDD proceeding with computation,12 properties remain. new max is 4
SDD size :1 after 5
SDD proceeding with computation,12 properties remain. new max is 8
SDD size :5 after 10
SDD proceeding with computation,12 properties remain. new max is 16
SDD size :10 after 19
SDD proceeding with computation,12 properties remain. new max is 32
SDD size :19 after 52
Invariant property smplace_38 does not hold.
SDD proceeding with computation,11 properties remain. new max is 32
SDD size :52 after 1103
SDD proceeding with computation,11 properties remain. new max is 64
SDD size :1103 after 2128
[2024-05-21 05:56:43] [INFO ] After 270ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:12
[2024-05-21 05:56:43] [INFO ] [Nat]Absence check using 8 positive place invariants in 29 ms returned sat
[2024-05-21 05:56:43] [INFO ] After 170ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :12
[2024-05-21 05:56:43] [INFO ] After 279ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :12
Attempting to minimize the solution found.
Minimization took 60 ms.
[2024-05-21 05:56:43] [INFO ] After 550ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :12
Fused 12 Parikh solutions to 11 different solutions.
SDD proceeding with computation,11 properties remain. new max is 128
SDD size :2128 after 104517
Finished Parikh walk after 73 steps, including 0 resets, run visited all 1 properties in 1 ms. (steps per millisecond=73 )
Parikh walk visited 11 properties in 505 ms.
ITS runner failed with exception null
java.lang.InterruptedException
at java.base/java.lang.Object.wait(Native Method)
at java.base/java.lang.Thread.join(Thread.java:1304)
at java.base/java.lang.Thread.join(Thread.java:1372)
at fr.lip6.move.gal.application.runner.AbstractRunner.join(AbstractRunner.java:27)
at fr.lip6.move.gal.application.runner.its.ITSRunner.join(ITSRunner.java:177)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.verifyWithSDD(GlobalPropertySolver.java:675)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.lambda$2(ReachabilitySolver.java:63)
at java.base/java.lang.Thread.run(Thread.java:833)
Able to resolve query StableMarking after proving 39 properties.
FORMULA StableMarking FALSE TECHNIQUES RANDOM_WALK PARIKH_WALK DECISION_DIAGRAMS COLLATERAL_PROCESSING BESTFIRST_WALK TOPOLOGICAL
Total runtime 1946 ms.

BK_STOP 1716271005873

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StableMarking = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202304061127.jar
+ VERSION=202304061127
+ echo 'Running Version 202304061127'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-25"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="gold2023"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool gold2023"
echo " Input is Angiogenesis-PT-25, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r044-smll-171620180600028"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-25.tgz
mv Angiogenesis-PT-25 execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StableMarking.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;