Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2024-input.r025-smll-171620165700009.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2024-input.qcow2 backing_fmt=qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5568
Executing tool greatspnxred
Input is Angiogenesis-PT-05, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r025-smll-171620165700009
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 532K
-rw-r--r-- 1 mcc users 7.4K May 14 13:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 73K May 14 13:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.1K May 14 13:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 46K May 14 13:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 18 16:42 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K May 18 16:42 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.5K Apr 22 14:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 28K Apr 22 14:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Apr 22 14:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Apr 22 14:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 14K Apr 11 19:36 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 130K Apr 11 19:36 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 11K Apr 11 19:35 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 97K Apr 11 19:35 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Apr 22 14:27 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Apr 22 14:27 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 18 16:42 equiv_col
-rw-r--r-- 1 mcc users 3 May 18 16:42 instance
-rw-r--r-- 1 mcc users 6 May 18 16:42 iscolored
-rw-r--r-- 1 mcc users 33K May 18 16:42 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-00
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-01
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-02
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-03
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-04
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-05
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-06
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-07
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-08
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-09
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-10
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2024-11
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2023-12
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2023-13
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2023-14
FORMULA_NAME Angiogenesis-PT-05-CTLCardinality-2023-15

=== Now, execution of the tool begins

BK_START 1716242765213

Invoking MCC driver with
BK_TOOL=greatspnxred
BK_EXAMINATION=CTLCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Angiogenesis-PT-05
BK_MEMORY_CONFINEMENT=16384
Applying reductions before tool greatspn
Invoking reducer
Running Version 202405141337
[2024-05-20 22:06:07] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLCardinality, -timeout, 360, -rebuildPNML]
[2024-05-20 22:06:07] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2024-05-20 22:06:08] [INFO ] Load time of PNML (sax parser for PT used): 125 ms
[2024-05-20 22:06:08] [INFO ] Transformed 39 places.
[2024-05-20 22:06:08] [INFO ] Transformed 64 transitions.
[2024-05-20 22:06:08] [INFO ] Parsed PT model containing 39 places and 64 transitions and 185 arcs in 391 ms.
Parsed 16 properties from file /home/mcc/execution/CTLCardinality.xml in 39 ms.
Initial state reduction rules removed 1 formulas.
FORMULA Angiogenesis-PT-05-CTLCardinality-2023-15 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Support contains 38 out of 39 places. Attempting structural reductions.
Starting structural reductions in LTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Applied a total of 0 rules in 22 ms. Remains 39 /39 variables (removed 0) and now considering 64/64 (removed 0) transitions.
// Phase 1: matrix 64 rows 39 cols
[2024-05-20 22:06:08] [INFO ] Computed 8 invariants in 19 ms
[2024-05-20 22:06:08] [INFO ] Implicit Places using invariants in 283 ms returned []
[2024-05-20 22:06:08] [INFO ] Invariant cache hit.
[2024-05-20 22:06:08] [INFO ] Implicit Places using invariants and state equation in 147 ms returned []
Implicit Place search using SMT with State Equation took 503 ms to find 0 implicit places.
Running 61 sub problems to find dead transitions.
[2024-05-20 22:06:08] [INFO ] Invariant cache hit.
At refinement iteration 0 (INCLUDED_ONLY) 0/38 variables, 7/7 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/38 variables, 0/7 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 2 (OVERLAPS) 1/39 variables, 1/8 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/39 variables, 0/8 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 4 (OVERLAPS) 64/103 variables, 39/47 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/103 variables, 0/47 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 6 (OVERLAPS) 0/103 variables, 0/47 constraints. Problems are: Problem set: 0 solved, 61 unsolved
No progress, stopping.
After SMT solving in domain Real declared 103/103 variables, and 47 constraints, problems are : Problem set: 0 solved, 61 unsolved in 1930 ms.
Refiners :[Positive P Invariants (semi-flows): 8/8 constraints, State Equation: 39/39 constraints, PredecessorRefiner: 61/61 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 0 solved, 61 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/38 variables, 7/7 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/38 variables, 0/7 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 2 (OVERLAPS) 1/39 variables, 1/8 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/39 variables, 0/8 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 4 (OVERLAPS) 64/103 variables, 39/47 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/103 variables, 61/108 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 6 (INCLUDED_ONLY) 0/103 variables, 0/108 constraints. Problems are: Problem set: 0 solved, 61 unsolved
At refinement iteration 7 (OVERLAPS) 0/103 variables, 0/108 constraints. Problems are: Problem set: 0 solved, 61 unsolved
No progress, stopping.
After SMT solving in domain Int declared 103/103 variables, and 108 constraints, problems are : Problem set: 0 solved, 61 unsolved in 1704 ms.
Refiners :[Positive P Invariants (semi-flows): 8/8 constraints, State Equation: 39/39 constraints, PredecessorRefiner: 61/61 constraints, Known Traps: 0/0 constraints]
After SMT, in 3759ms problems are : Problem set: 0 solved, 61 unsolved
Search for dead transitions found 0 dead transitions in 3784ms
Finished structural reductions in LTL mode , in 1 iterations and 4365 ms. Remains : 39/39 places, 64/64 transitions.
Support contains 38 out of 39 places after structural reductions.
[2024-05-20 22:06:13] [INFO ] Flatten gal took : 60 ms
[2024-05-20 22:06:13] [INFO ] Flatten gal took : 23 ms
[2024-05-20 22:06:13] [INFO ] Input system was already deterministic with 64 transitions.
RANDOM walk for 40010 steps (10 resets) in 2288 ms. (17 steps per ms) remains 15/79 properties
BEST_FIRST walk for 4003 steps (8 resets) in 45 ms. (87 steps per ms) remains 14/15 properties
BEST_FIRST walk for 4004 steps (8 resets) in 20 ms. (190 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 37 ms. (105 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 36 ms. (108 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 28 ms. (138 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 37 ms. (105 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 62 ms. (63 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4003 steps (8 resets) in 37 ms. (105 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 32 ms. (121 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 11 ms. (333 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4003 steps (8 resets) in 17 ms. (222 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 12 ms. (308 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 16 ms. (235 steps per ms) remains 14/14 properties
BEST_FIRST walk for 4004 steps (8 resets) in 16 ms. (235 steps per ms) remains 14/14 properties
[2024-05-20 22:06:14] [INFO ] Invariant cache hit.
Problem AtomicPropp13 is UNSAT
Problem AtomicPropp61 is UNSAT
All remaining problems are real, not stopping.
At refinement iteration 0 (INCLUDED_ONLY) 0/19 variables, 1/1 constraints. Problems are: Problem set: 2 solved, 12 unsolved
At refinement iteration 1 (INCLUDED_ONLY) 0/19 variables, 0/1 constraints. Problems are: Problem set: 2 solved, 12 unsolved
Problem AtomicPropp5 is UNSAT
Problem AtomicPropp8 is UNSAT
Problem AtomicPropp26 is UNSAT
Problem AtomicPropp33 is UNSAT
Problem AtomicPropp42 is UNSAT
Problem AtomicPropp43 is UNSAT
Problem AtomicPropp50 is UNSAT
Problem AtomicPropp59 is UNSAT
Problem AtomicPropp66 is UNSAT
Problem AtomicPropp68 is UNSAT
Problem AtomicPropp78 is UNSAT
At refinement iteration 2 (OVERLAPS) 20/39 variables, 7/8 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/39 variables, 0/8 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 4 (OVERLAPS) 64/103 variables, 39/47 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/103 variables, 0/47 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 6 (OVERLAPS) 0/103 variables, 0/47 constraints. Problems are: Problem set: 13 solved, 1 unsolved
No progress, stopping.
After SMT solving in domain Real declared 103/103 variables, and 47 constraints, problems are : Problem set: 13 solved, 1 unsolved in 120 ms.
Refiners :[Positive P Invariants (semi-flows): 8/8 constraints, State Equation: 39/39 constraints, PredecessorRefiner: 14/14 constraints, Known Traps: 0/0 constraints]
Escalating to Integer solving :Problem set: 13 solved, 1 unsolved
At refinement iteration 0 (INCLUDED_ONLY) 0/1 variables, 0/0 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 1 (OVERLAPS) 32/33 variables, 3/3 constraints. Problems are: Problem set: 13 solved, 1 unsolved
[2024-05-20 22:06:14] [INFO ] Deduced a trap composed of 23 places in 50 ms of which 10 ms to minimize.
At refinement iteration 2 (INCLUDED_ONLY) 0/33 variables, 1/4 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 3 (INCLUDED_ONLY) 0/33 variables, 0/4 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 4 (OVERLAPS) 6/39 variables, 5/9 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 5 (INCLUDED_ONLY) 0/39 variables, 0/9 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 6 (OVERLAPS) 64/103 variables, 39/48 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 7 (INCLUDED_ONLY) 0/103 variables, 1/49 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 8 (INCLUDED_ONLY) 0/103 variables, 0/49 constraints. Problems are: Problem set: 13 solved, 1 unsolved
At refinement iteration 9 (OVERLAPS) 0/103 variables, 0/49 constraints. Problems are: Problem set: 13 solved, 1 unsolved
No progress, stopping.
After SMT solving in domain Int declared 103/103 variables, and 49 constraints, problems are : Problem set: 13 solved, 1 unsolved in 140 ms.
Refiners :[Positive P Invariants (semi-flows): 8/8 constraints, State Equation: 39/39 constraints, PredecessorRefiner: 1/14 constraints, Known Traps: 1/1 constraints]
After SMT, in 273ms problems are : Problem set: 13 solved, 1 unsolved
Parikh walk visited 0 properties in 29 ms.
Support contains 1 out of 39 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 39/39 places, 64/64 transitions.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.0 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 1 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 4 place count 36 transition count 63
Drop transitions (Empty/Sink Transition effects.) removed 1 transitions
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 5 place count 36 transition count 62
Performed 10 Post agglomeration using F-continuation condition.Transition count delta: 10
Deduced a syphon composed of 10 places in 1 ms
Reduce places removed 10 places and 0 transitions.
Iterating global reduction 1 with 20 rules applied. Total rules applied 25 place count 26 transition count 52
Drop transitions (Empty/Sink Transition effects.) removed 9 transitions
Reduce isomorphic transitions removed 9 transitions.
Graph (complete) has 79 edges and 26 vertex of which 25 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.0 ms
Discarding 1 places :
Also discarding 0 output transitions
Iterating post reduction 1 with 10 rules applied. Total rules applied 35 place count 25 transition count 43
Drop transitions (Empty/Sink Transition effects.) removed 1 transitions
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 2 with 1 rules applied. Total rules applied 36 place count 25 transition count 42
Performed 5 Post agglomeration using F-continuation condition.Transition count delta: -6
Deduced a syphon composed of 5 places in 0 ms
Reduce places removed 5 places and 0 transitions.
Iterating global reduction 3 with 10 rules applied. Total rules applied 46 place count 20 transition count 48
Drop transitions (Empty/Sink Transition effects.) removed 10 transitions
Reduce isomorphic transitions removed 10 transitions.
Iterating post reduction 3 with 10 rules applied. Total rules applied 56 place count 20 transition count 38
Drop transitions (Redundant composition of simpler transitions.) removed 6 transitions
Redundant transition composition rules discarded 6 transitions
Iterating global reduction 4 with 6 rules applied. Total rules applied 62 place count 20 transition count 32
Free-agglomeration rule (complex) applied 5 times.
Iterating global reduction 4 with 5 rules applied. Total rules applied 67 place count 20 transition count 27
Reduce places removed 5 places and 0 transitions.
Drop transitions (Empty/Sink Transition effects.) removed 2 transitions
Reduce isomorphic transitions removed 2 transitions.
Iterating post reduction 4 with 7 rules applied. Total rules applied 74 place count 15 transition count 25
Drop transitions (Redundant composition of simpler transitions.) removed 1 transitions
Redundant transition composition rules discarded 1 transitions
Iterating global reduction 5 with 1 rules applied. Total rules applied 75 place count 15 transition count 24
Applied a total of 75 rules in 62 ms. Remains 15 /39 variables (removed 24) and now considering 24/64 (removed 40) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 62 ms. Remains : 15/39 places, 24/64 transitions.
RANDOM walk for 40005 steps (8 resets) in 238 ms. (167 steps per ms) remains 1/1 properties
BEST_FIRST walk for 40004 steps (8 resets) in 59 ms. (666 steps per ms) remains 1/1 properties
Finished probabilistic random walk after 25767 steps, run visited all 1 properties in 58 ms. (steps per millisecond=444 )
Probabilistic random walk after 25767 steps, saw 3029 distinct states, run finished after 64 ms. (steps per millisecond=402 ) properties seen :1
Successfully simplified 13 atomic propositions for a total of 15 simplifications.
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-02 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2024-05-20 22:06:14] [INFO ] Initial state reduction rules for CTL removed 1 formulas.
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 10 ms
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-07 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 8 ms
[2024-05-20 22:06:14] [INFO ] Input system was already deterministic with 64 transitions.
Support contains 32 out of 39 places (down from 35) after GAL structural reductions.
Computed a total of 0 stabilizing places and 0 stable transitions
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.2 ms
Starting structural reductions in LTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 38 transition count 64
Applied a total of 1 rules in 2 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 2 ms. Remains : 38/39 places, 64/64 transitions.
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 7 ms
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 7 ms
[2024-05-20 22:06:14] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.1 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 1 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 4 place count 36 transition count 63
Partial Post-agglomeration rule applied 1 times.
Drop transitions (Partial Post agglomeration) removed 1 transitions
Iterating global reduction 0 with 1 rules applied. Total rules applied 5 place count 36 transition count 63
Applied a total of 5 rules in 11 ms. Remains 36 /39 variables (removed 3) and now considering 63/64 (removed 1) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 11 ms. Remains : 36/39 places, 63/64 transitions.
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 6 ms
[2024-05-20 22:06:14] [INFO ] Input system was already deterministic with 63 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.0 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 1 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 4 place count 36 transition count 63
Partial Post-agglomeration rule applied 6 times.
Drop transitions (Partial Post agglomeration) removed 6 transitions
Iterating global reduction 0 with 6 rules applied. Total rules applied 10 place count 36 transition count 63
Applied a total of 10 rules in 9 ms. Remains 36 /39 variables (removed 3) and now considering 63/64 (removed 1) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 10 ms. Remains : 36/39 places, 63/64 transitions.
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:14] [INFO ] Input system was already deterministic with 63 transitions.
Starting structural reductions in LTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 38 transition count 64
Applied a total of 1 rules in 1 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/39 places, 64/64 transitions.
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 6 ms
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:14] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 38 transition count 64
Applied a total of 1 rules in 1 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 2 ms. Remains : 38/39 places, 64/64 transitions.
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 6 ms
[2024-05-20 22:06:14] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.0 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 1 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 4 place count 36 transition count 63
Partial Post-agglomeration rule applied 2 times.
Drop transitions (Partial Post agglomeration) removed 2 transitions
Iterating global reduction 0 with 2 rules applied. Total rules applied 6 place count 36 transition count 63
Applied a total of 6 rules in 9 ms. Remains 36 /39 variables (removed 3) and now considering 63/64 (removed 1) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 10 ms. Remains : 36/39 places, 63/64 transitions.
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:14] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Input system was already deterministic with 63 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.1 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 1 place count 38 transition count 63
Deduced a syphon composed of 1 places in 1 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 4 place count 36 transition count 63
Partial Post-agglomeration rule applied 3 times.
Drop transitions (Partial Post agglomeration) removed 3 transitions
Iterating global reduction 0 with 3 rules applied. Total rules applied 7 place count 36 transition count 63
Applied a total of 7 rules in 9 ms. Remains 36 /39 variables (removed 3) and now considering 63/64 (removed 1) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 9 ms. Remains : 36/39 places, 63/64 transitions.
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 4 ms
[2024-05-20 22:06:15] [INFO ] Input system was already deterministic with 63 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.1 ms
Discarding 1 places :
Also discarding 0 output transitions
Partial Post-agglomeration rule applied 5 times.
Drop transitions (Partial Post agglomeration) removed 5 transitions
Iterating global reduction 0 with 5 rules applied. Total rules applied 6 place count 38 transition count 64
Applied a total of 6 rules in 7 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 7 ms. Remains : 38/39 places, 64/64 transitions.
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 4 ms
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 38 transition count 64
Applied a total of 1 rules in 1 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 2 ms. Remains : 38/39 places, 64/64 transitions.
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 4 ms
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 38 transition count 64
Applied a total of 1 rules in 1 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/39 places, 64/64 transitions.
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 38 transition count 64
Applied a total of 1 rules in 1 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 2 ms. Remains : 38/39 places, 64/64 transitions.
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.1 ms
Discarding 1 places :
Also discarding 0 output transitions
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 1 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 4 place count 36 transition count 63
Applied a total of 4 rules in 5 ms. Remains 36 /39 variables (removed 3) and now considering 63/64 (removed 1) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 6 ms. Remains : 36/39 places, 63/64 transitions.
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 4 ms
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Input system was already deterministic with 63 transitions.
Starting structural reductions in LTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 38 transition count 64
Applied a total of 1 rules in 2 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 2 ms. Remains : 38/39 places, 64/64 transitions.
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 4 ms
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 4 ms
[2024-05-20 22:06:15] [INFO ] Input system was already deterministic with 64 transitions.
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 6 ms
[2024-05-20 22:06:15] [INFO ] Flatten gal took : 5 ms
[2024-05-20 22:06:15] [INFO ] Export to MCC of 13 properties in file /home/mcc/execution/CTLCardinality.sr.xml took 3 ms.
[2024-05-20 22:06:15] [INFO ] Export to PNML in file /home/mcc/execution/model.sr.pnml of net with 39 places, 64 transitions and 185 arcs took 2 ms.
Total runtime 7430 ms.
There are residual formulas that ITS could not solve within timeout
----------------------------------------------------------------------
GreatSPN-meddly tool, MCC 2023
----------------------------------------------------------------------

Running Angiogenesis-PT-05

IS_COLORED=
IS_NUPN=

LOADING PETRI NET FILE /home/mcc/execution/410/model.pnml (PNML) ...
PNML VERSION 2009, P/T NET.
COLOR CLASSES: 0
CONSTANTS: 0
PLACES: 39
TRANSITIONS: 64
COLOR VARS: 0
MEASURES: 0
LOADING TIME: [User 0.002s, Sys 0.000s]


SAVING FILE /home/mcc/execution/410/model (.net / .def) ...
EXPORT TIME: [User 0.000s, Sys 0.000s]


----------------------------------------------------------------------
GreatSPN/Meddly.
Copyright (C) 1987-2022, University of Torino, Italy.
website: https://github.com/greatspn/SOURCES

Based on MEDDLY version 0.16.0
Copyright (C) 2009, Iowa State University Research Foundation, Inc.
website: http://meddly.sourceforge.net

Process ID: 547
MODEL NAME: /home/mcc/execution/410/model
39 places, 64 transitions.

Creating all event NSFs..
Creating all event NSFs..
Creating all event NSFs..
Creating all event NSFs..
Split: SplitSubtract
Start RS construction.
Split: SplitSubtract
Start RS construction.
Split: SplitSubtract
Start RS construction.
Split: SplitSubtract
Start RS construction.
Building monolithic NSF...
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-03 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-01 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-05 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-06 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-09 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-04 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-00 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-08 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2023-13 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2023-14 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2023-12 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-11 TRUE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
FORMULA Angiogenesis-PT-05-CTLCardinality-2024-10 FALSE TECHNIQUES DECISION_DIAGRAMS PARALLEL_PROCESSING UNFOLDING_TO_PT USE_NUPN TOPOLOGICAL
Ok.
EXITCODE: 0
----------------------------------------------------------------------

BK_STOP 1716242795431

--------------------
content from stderr:

+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202405141337.jar
+ VERSION=202405141337
+ echo 'Running Version 202405141337'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination CTLCardinality -timeout 360 -rebuildPNML

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-05"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="greatspnxred"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5568"
echo " Executing tool greatspnxred"
echo " Input is Angiogenesis-PT-05, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r025-smll-171620165700009"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-05.tgz
mv Angiogenesis-PT-05 execution
cd execution
if [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "UpperBounds" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] || [ "CTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;