Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r537-tall-167987255100266.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..............
=====================================================================
Generated by BenchKit 2-5348
Executing tool smartxred
Input is PGCD-COL-D05N025, examination is ReachabilityDeadlock
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r537-tall-167987255100266
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 412K
-rw-r--r-- 1 mcc users 7.7K Mar 23 15:23 CTLCardinality.txt
-rw-r--r-- 1 mcc users 87K Mar 23 15:23 CTLCardinality.xml
-rw-r--r-- 1 mcc users 4.9K Mar 23 15:20 CTLFireability.txt
-rw-r--r-- 1 mcc users 46K Mar 23 15:20 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.7K Mar 23 07:07 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Mar 23 07:07 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.0K Mar 23 07:07 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Mar 23 07:07 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 Mar 26 22:42 NewModel
-rw-r--r-- 1 mcc users 8.8K Mar 23 15:25 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 91K Mar 23 15:25 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 6.3K Mar 23 15:25 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 54K Mar 23 15:25 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Mar 23 07:07 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K Mar 23 07:07 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Mar 26 22:42 equiv_pt
-rw-r--r-- 1 mcc users 8 Mar 26 22:42 instance
-rw-r--r-- 1 mcc users 5 Mar 26 22:42 iscolored
-rw-r--r-- 1 mcc users 11K Mar 31 16:48 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME ReachabilityDeadlock

=== Now, execution of the tool begins

BK_START 1680811006729

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=smartxred
BK_EXAMINATION=ReachabilityDeadlock
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=PGCD-COL-D05N025
Applying reductions before tool smart
Invoking reducer
Running Version 202304061127
[2023-04-06 19:56:48] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -timeout, 180, -rebuildPNML]
[2023-04-06 19:56:48] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-04-06 19:56:48] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[2023-04-06 19:56:48] [WARNING] Using fallBack plugin, rng conformance not checked
[2023-04-06 19:56:48] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 380 ms
[2023-04-06 19:56:48] [INFO ] Imported 3 HL places and 3 HL transitions for a total of 18 PT places and 18.0 transition bindings in 143 ms.
Parsed 1 properties from file /home/mcc/execution/ReachabilityDeadlock.xml in 2 ms.
Working with output stream class java.io.PrintStream
[2023-04-06 19:56:48] [INFO ] Built PT skeleton of HLPN with 3 places and 3 transitions 14 arcs in 5 ms.
[2023-04-06 19:56:48] [INFO ] Skeletonized 1 HLPN properties in 0 ms.
Computed a total of 0 stabilizing places and 0 stable transitions
Prefix of Interest using HLPN skeleton for deadlock discarded 0 places and 0 transitions.
Arc [2:1*[(MOD (ADD $x 1) 6)]] contains successor/predecessor on variables of sort CD
[2023-04-06 19:56:48] [INFO ] Unfolded HLPN to a Petri net with 18 places and 18 transitions 84 arcs in 6 ms.
[2023-04-06 19:56:48] [INFO ] Unfolded 1 HLPN properties in 0 ms.
Built sparse matrix representations for Structural reductions in 0 ms.24174KB memory used
Starting structural reductions in DEADLOCK mode, iteration 0 : 18/18 places, 18/18 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 9 ms. Remains 18 /18 variables (removed 0) and now considering 18/18 (removed 0) transitions.
// Phase 1: matrix 18 rows 18 cols
[2023-04-06 19:56:48] [INFO ] Computed 7 invariants in 9 ms
[2023-04-06 19:56:48] [INFO ] Dead Transitions using invariants and state equation in 137 ms found 0 transitions.
Finished structural reductions in DEADLOCK mode , in 1 iterations and 171 ms. Remains : 18/18 places, 18/18 transitions.
Starting structural reductions in DEADLOCK mode, iteration 0 : 18/18 places, 18/18 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 3 ms. Remains 18 /18 variables (removed 0) and now considering 18/18 (removed 0) transitions.
[2023-04-06 19:56:48] [INFO ] Invariant cache hit.
[2023-04-06 19:56:48] [INFO ] Implicit Places using invariants in 42 ms returned [12, 13, 14, 15, 16, 17]
Discarding 6 places :
Implicit Place search using SMT only with invariants took 44 ms to find 6 implicit places.
Starting structural reductions in DEADLOCK mode, iteration 1 : 12/18 places, 18/18 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 2 ms. Remains 12 /12 variables (removed 0) and now considering 18/18 (removed 0) transitions.
Finished structural reductions in DEADLOCK mode , in 2 iterations and 49 ms. Remains : 12/18 places, 18/18 transitions.
Random walk for 1250011 steps, including 0 resets, run took 264 ms (no deadlock found). (steps per millisecond=4734 )
Random directed walk for 1250038 steps, including 0 resets, run took 209 ms (no deadlock found). (steps per millisecond=5981 )
// Phase 1: matrix 18 rows 12 cols
[2023-04-06 19:56:49] [INFO ] Computed 1 invariants in 3 ms
[2023-04-06 19:56:49] [INFO ] [Real]Absence check using 1 positive place invariants in 1 ms returned sat
[2023-04-06 19:56:49] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2023-04-06 19:56:49] [INFO ] [Real]Absence check using state equation in 8 ms returned sat
[2023-04-06 19:56:49] [INFO ] State equation strengthened by 6 read => feed constraints.
[2023-04-06 19:56:49] [INFO ] [Real]Added 6 Read/Feed constraints in 1 ms returned sat
[2023-04-06 19:56:49] [INFO ] Solution in real domain found non-integer solution.
[2023-04-06 19:56:49] [INFO ] [Nat]Absence check using 1 positive place invariants in 1 ms returned sat
[2023-04-06 19:56:49] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2023-04-06 19:56:49] [INFO ] [Nat]Absence check using state equation in 7 ms returned sat
[2023-04-06 19:56:49] [INFO ] State equation strengthened by 6 read => feed constraints.
[2023-04-06 19:56:49] [INFO ] [Nat]Added 6 Read/Feed constraints in 1 ms returned sat
[2023-04-06 19:56:49] [INFO ] Deduced a trap composed of 6 places in 27 ms of which 3 ms to minimize.
[2023-04-06 19:56:49] [INFO ] Trap strengthening (SAT) tested/added 2/1 trap constraints in 35 ms
[2023-04-06 19:56:49] [INFO ] Computed and/alt/rep : 6/12/6 causal constraints (skipped 0 transitions) in 3 ms.
[2023-04-06 19:56:49] [INFO ] Added : 1 causal constraints over 1 iterations in 9 ms. Result :sat
Attempting to minimize the solution found.
Minimization took 1 ms.
Parikh directed walk for 5800 steps, including 115 resets, run took 11 ms. (steps per millisecond=527 )
Random directed walk for 500037 steps, including 0 resets, run took 79 ms (no deadlock found). (steps per millisecond=6329 )
Random walk for 500043 steps, including 0 resets, run took 79 ms (no deadlock found). (steps per millisecond=6329 )
Random directed walk for 500031 steps, including 0 resets, run took 84 ms (no deadlock found). (steps per millisecond=5952 )
Random walk for 500012 steps, including 0 resets, run took 72 ms (no deadlock found). (steps per millisecond=6944 )
Starting structural reductions in DEADLOCK mode, iteration 0 : 12/12 places, 18/18 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 1 ms. Remains 12 /12 variables (removed 0) and now considering 18/18 (removed 0) transitions.
[2023-04-06 19:56:49] [INFO ] Invariant cache hit.
[2023-04-06 19:56:49] [INFO ] Implicit Places using invariants in 31 ms returned []
[2023-04-06 19:56:49] [INFO ] Invariant cache hit.
[2023-04-06 19:56:49] [INFO ] State equation strengthened by 6 read => feed constraints.
[2023-04-06 19:56:49] [INFO ] Implicit Places using invariants and state equation in 37 ms returned []
Implicit Place search using SMT with State Equation took 70 ms to find 0 implicit places.
[2023-04-06 19:56:49] [INFO ] Redundant transitions in 1 ms returned []
[2023-04-06 19:56:49] [INFO ] Invariant cache hit.
[2023-04-06 19:56:49] [INFO ] Dead Transitions using invariants and state equation in 30 ms found 0 transitions.
Finished structural reductions in DEADLOCK mode , in 1 iterations and 106 ms. Remains : 12/12 places, 18/18 transitions.
Random walk for 1250013 steps, including 0 resets, run took 200 ms (no deadlock found). (steps per millisecond=6250 )
Random directed walk for 1250015 steps, including 0 resets, run took 177 ms (no deadlock found). (steps per millisecond=7062 )
[2023-04-06 19:56:50] [INFO ] Invariant cache hit.
[2023-04-06 19:56:50] [INFO ] [Real]Absence check using 1 positive place invariants in 1 ms returned sat
[2023-04-06 19:56:50] [INFO ] [Real]Adding state equation constraints to refine reachable states.
[2023-04-06 19:56:50] [INFO ] [Real]Absence check using state equation in 7 ms returned sat
[2023-04-06 19:56:50] [INFO ] State equation strengthened by 6 read => feed constraints.
[2023-04-06 19:56:50] [INFO ] [Real]Added 6 Read/Feed constraints in 1 ms returned sat
[2023-04-06 19:56:50] [INFO ] Solution in real domain found non-integer solution.
[2023-04-06 19:56:50] [INFO ] [Nat]Absence check using 1 positive place invariants in 0 ms returned sat
[2023-04-06 19:56:50] [INFO ] [Nat]Adding state equation constraints to refine reachable states.
[2023-04-06 19:56:50] [INFO ] [Nat]Absence check using state equation in 8 ms returned sat
[2023-04-06 19:56:50] [INFO ] State equation strengthened by 6 read => feed constraints.
[2023-04-06 19:56:50] [INFO ] [Nat]Added 6 Read/Feed constraints in 2 ms returned sat
[2023-04-06 19:56:50] [INFO ] Deduced a trap composed of 6 places in 23 ms of which 1 ms to minimize.
[2023-04-06 19:56:50] [INFO ] Trap strengthening (SAT) tested/added 2/1 trap constraints in 28 ms
[2023-04-06 19:56:50] [INFO ] Computed and/alt/rep : 6/12/6 causal constraints (skipped 0 transitions) in 6 ms.
[2023-04-06 19:56:50] [INFO ] Added : 1 causal constraints over 1 iterations in 11 ms. Result :sat
Attempting to minimize the solution found.
Minimization took 1 ms.
Parikh directed walk for 5800 steps, including 114 resets, run took 9 ms. (steps per millisecond=644 )
Random directed walk for 500014 steps, including 0 resets, run took 74 ms (no deadlock found). (steps per millisecond=6756 )
Random walk for 500003 steps, including 0 resets, run took 71 ms (no deadlock found). (steps per millisecond=7042 )
Random directed walk for 500013 steps, including 0 resets, run took 80 ms (no deadlock found). (steps per millisecond=6250 )
Random walk for 500038 steps, including 0 resets, run took 74 ms (no deadlock found). (steps per millisecond=6757 )
[2023-04-06 19:56:50] [INFO ] Flatten gal took : 15 ms
[2023-04-06 19:56:50] [INFO ] Export to MCC of 1 properties in file /home/mcc/execution/ReachabilityDeadlock.sr.xml took 0 ms.
[2023-04-06 19:56:50] [INFO ] Export to PNML in file /home/mcc/execution/model.sr.pnml of net with 18 places, 18 transitions and 84 arcs took 1 ms.
Total runtime 2729 ms.
There are residual formulas that ITS could not solve within timeout
======================================================
========== this is Smart for the MCC'2018 ============
======================================================
Running PGCD (COL), instance D05N025
Examination ReachabilityDeadlock
Parser /home/mcc/BenchKit/bin//../reducer/bin//../../smart/bin//parser/DeadlockParse.jar
Model checker /home/mcc/BenchKit/bin//../reducer/bin//../../smart/bin//rem_exec//smart

PNML FILE: model.pnml
Petri model created: 18 places, 18 transitions, 84 arcs.
TIME LIMIT: Killed by timeout after 1800 seconds
MemTotal: 16393216 kB
MemFree: 773484 kB
After kill :
MemTotal: 16393216 kB
MemFree: 16124464 kB

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202304061127.jar
+ VERSION=202304061127
+ echo 'Running Version 202304061127'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -timeout 180 -rebuildPNML
Caught signal 15, terminating.

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PGCD-COL-D05N025"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="smartxred"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool smartxred"
echo " Input is PGCD-COL-D05N025, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r537-tall-167987255100266"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PGCD-COL-D05N025.tgz
mv PGCD-COL-D05N025 execution
cd execution
if [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "UpperBounds" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] || [ "ReachabilityDeadlock" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityDeadlock" = "ReachabilityDeadlock" ] || [ "ReachabilityDeadlock" = "QuasiLiveness" ] || [ "ReachabilityDeadlock" = "StableMarking" ] || [ "ReachabilityDeadlock" = "Liveness" ] || [ "ReachabilityDeadlock" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityDeadlock"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;