Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r505-tall-167912730200798.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool smartxred
Input is ViralEpidemic-PT-S03D1C1A06, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r505-tall-167912730200798
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 3.5M
-rw-r--r-- 1 mcc users 8.1K Feb 25 20:30 CTLCardinality.txt
-rw-r--r-- 1 mcc users 74K Feb 25 20:30 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.2K Feb 25 20:22 CTLFireability.txt
-rw-r--r-- 1 mcc users 48K Feb 25 20:22 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:41 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.6K Feb 25 17:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 28K Feb 25 17:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K Feb 25 17:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 25 17:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 17K Feb 25 20:43 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 148K Feb 25 20:43 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.3K Feb 25 20:39 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 54K Feb 25 20:39 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Feb 25 17:26 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K Feb 25 17:26 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 equiv_col
-rw-r--r-- 1 mcc users 11 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 3.1M Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1679311775994

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=smartxred
BK_EXAMINATION=StableMarking
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=ViralEpidemic-PT-S03D1C1A06
Applying reductions before tool smart
Invoking reducer
Running Version 202303021504
[2023-03-20 11:29:37] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -timeout, 180, -rebuildPNML]
[2023-03-20 11:29:37] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-20 11:29:37] [INFO ] Load time of PNML (sax parser for PT used): 294 ms
[2023-03-20 11:29:37] [INFO ] Transformed 5466 places.
[2023-03-20 11:29:37] [INFO ] Transformed 7651 transitions.
[2023-03-20 11:29:38] [INFO ] Parsed PT model containing 5466 places and 7651 transitions and 17488 arcs in 574 ms.
Structural test allowed to assert that 3280 places are NOT stable. Took 25 ms.
Incomplete random walk after 10000 steps, including 153 resets, run finished after 1577 ms. (steps per millisecond=6 ) properties (out of 2186) seen :1867
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=14 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 11 ms. (steps per millisecond=9 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=14 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 8 ms. (steps per millisecond=12 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 8 ms. (steps per millisecond=12 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 8 ms. (steps per millisecond=12 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 8 ms. (steps per millisecond=12 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=14 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 8 ms. (steps per millisecond=12 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=14 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=14 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=14 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=20 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=20 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=14 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=14 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=20 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=20 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=20 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 100 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=20 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=20 ) properties (out of 319) seen :0
Incomplete Best-First random walk after 101 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=16 ) properties (out of 319) seen :0
Running SMT prover for 319 properties.
// Phase 1: matrix 7651 rows 5466 cols
[2023-03-20 11:29:41] [INFO ] Invariants computation overflowed in 985 ms
java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Error writing to Z3 solver: java.io.IOException: Stream closed...
at fr.lip6.move.gal.structural.smt.SMTUtils.execAndCheckResult(SMTUtils.java:251)
at fr.lip6.move.gal.structural.smt.DeadlockTester.verifyPossible(DeadlockTester.java:629)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMTIncremental(DeadlockTester.java:339)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMT(DeadlockTester.java:223)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.applyReductions(ReachabilitySolver.java:95)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.applyReachabilitySolver(GlobalPropertySolver.java:724)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.solveProperty(GlobalPropertySolver.java:558)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.preSolveLiveness(GlobalPropertySolver.java:412)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.preStableMarking(GlobalPropertySolver.java:321)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.solveProperty(GlobalPropertySolver.java:294)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:386)
at fr.lip6.move.gal.application.Application.start(Application.java:178)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:45)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:402)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:568)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2023-03-20 11:30:06] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
[2023-03-20 11:30:06] [INFO ] After 25096ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0
Fused 319 Parikh solutions to 1 different solutions.
Parikh walk visited 0 properties in 0 ms.
Support contains 319 out of 5466 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 5466/5466 places, 7651/7651 transitions.
Graph (complete) has 3279 edges and 5466 vertex of which 1134 are kept as prefixes of interest. Removing 4332 places using SCC suffix rule.8 ms
Discarding 4332 places :
Also discarding 5634 output transitions
Drop transitions removed 5634 transitions
Drop transitions removed 710 transitions
Reduce isomorphic transitions removed 710 transitions.
Drop transitions removed 88 transitions
Trivial Post-agglo rules discarded 88 transitions
Performed 88 trivial Post agglomeration. Transition count delta: 88
Iterating post reduction 0 with 798 rules applied. Total rules applied 799 place count 1134 transition count 1219
Reduce places removed 88 places and 0 transitions.
Iterating post reduction 1 with 88 rules applied. Total rules applied 887 place count 1046 transition count 1219
Discarding 307 places :
Symmetric choice reduction at 2 with 307 rule applications. Total rules 1194 place count 739 transition count 626
Iterating global reduction 2 with 307 rules applied. Total rules applied 1501 place count 739 transition count 626
Performed 225 Post agglomeration using F-continuation condition.Transition count delta: 225
Deduced a syphon composed of 225 places in 0 ms
Reduce places removed 225 places and 0 transitions.
Iterating global reduction 2 with 450 rules applied. Total rules applied 1951 place count 514 transition count 401
Renaming transitions due to excessive name length > 1024 char.
Reduce places removed 1 places and 1 transitions.
Iterating global reduction 2 with 1 rules applied. Total rules applied 1952 place count 513 transition count 400
Ensure Unique test removed 6 places
Iterating post reduction 2 with 6 rules applied. Total rules applied 1958 place count 507 transition count 400
Applied a total of 1958 rules in 186 ms. Remains 507 /5466 variables (removed 4959) and now considering 400/7651 (removed 7251) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 186 ms. Remains : 507/5466 places, 400/7651 transitions.
Finished random walk after 2702 steps, including 8 resets, run visited all 319 properties in 136 ms. (steps per millisecond=19 )
Able to resolve query StableMarking after proving 2187 properties.
FORMULA StableMarking FALSE TECHNIQUES RANDOM_WALK MARKED_SUFFIX_TEST TOPOLOGICAL
Total runtime 29389 ms.
ITS solved all properties within timeout

BK_STOP 1679311807754

--------------------
content from stderr:

+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination StableMarking -timeout 180 -rebuildPNML

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S03D1C1A06"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="smartxred"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool smartxred"
echo " Input is ViralEpidemic-PT-S03D1C1A06, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r505-tall-167912730200798"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S03D1C1A06.tgz
mv ViralEpidemic-PT-S03D1C1A06 execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StableMarking.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;