Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r467-smll-167912657600443.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is StigmergyElection-PT-11b, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r467-smll-167912657600443
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 413M
-rw-r--r-- 1 mcc users 7.2K Feb 26 16:33 CTLCardinality.txt
-rw-r--r-- 1 mcc users 75K Feb 26 16:33 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.4K Feb 26 16:25 CTLFireability.txt
-rw-r--r-- 1 mcc users 45K Feb 26 16:25 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K Feb 25 17:15 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K Feb 25 17:15 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.5K Feb 25 17:15 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Feb 25 17:15 LTLFireability.xml
-rw-r--r-- 1 mcc users 11K Feb 26 16:59 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 106K Feb 26 16:59 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 13K Feb 26 16:43 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 108K Feb 26 16:43 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 17:15 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 17:15 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 equiv_col
-rw-r--r-- 1 mcc users 4 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 413M Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1680361246560

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StableMarking
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=StigmergyElection-PT-11b
Not applying reductions.
Model is PT
StableMarking PT
Running Version 202303301559
[2023-04-01 15:00:48] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2023-04-01 15:00:48] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-04-01 15:01:06] [INFO ] Load time of PNML (sax parser for PT used): 18080 ms
[2023-04-01 15:01:07] [INFO ] Transformed 1515 places.
[2023-04-01 15:01:08] [INFO ] Transformed 357966 transitions.
[2023-04-01 15:01:08] [INFO ] Found NUPN structural information;
[2023-04-01 15:01:08] [INFO ] Parsed PT model containing 1515 places and 357966 transitions and 7842915 arcs in 20374 ms.
Graph (trivial) has 1547 edges and 1515 vertex of which 231 / 1515 are part of one of the 33 SCC in 47 ms
Free SCC test removed 198 places
Structural test allowed to assert that 971 places are NOT stable. Took 1371 ms.
Ensure Unique test removed 220 transitions
Reduce redundant transitions removed 220 transitions.
Incomplete random walk after 10000 steps, including 53 resets, run finished after 7587 ms. (steps per millisecond=1 ) properties (out of 544) seen :0
Interrupted probabilistic random walk after 8272 steps, run timeout after 24006 ms. (steps per millisecond=0 ) properties seen :{0=1, 1=1, 7=1, 8=1, 9=1, 11=1, 12=1, 13=1, 49=1, 50=1, 56=1, 57=1, 58=1, 60=1, 61=1, 62=1, 98=1, 99=1, 105=1, 106=1, 107=1, 109=1, 110=1, 111=1, 147=1, 148=1, 154=1, 155=1, 156=1, 158=1, 159=1, 160=1, 196=1, 197=1, 203=1, 204=1, 205=1, 207=1, 208=1, 209=1, 245=1, 246=1, 252=1, 253=1, 254=1, 256=1, 257=1, 258=1, 294=1, 295=1, 301=1, 302=1, 303=1, 305=1, 306=1, 307=1, 343=1, 344=1, 350=1, 351=1, 352=1, 354=1, 355=1, 356=1, 392=1, 393=1, 399=1, 400=1, 401=1, 403=1, 404=1, 405=1, 441=1, 442=1, 448=1, 449=1, 450=1, 452=1, 453=1, 454=1, 490=1, 491=1, 497=1, 498=1, 499=1, 501=1, 502=1, 503=1, 539=1}
Probabilistic random walk after 8272 steps, saw 4936 distinct states, run finished after 24008 ms. (steps per millisecond=0 ) properties seen :89
Running SMT prover for 455 properties.
[2023-04-01 15:01:47] [INFO ] Flow matrix only has 357714 transitions (discarded 32 similar events)
// Phase 1: matrix 357714 rows 1317 cols
[2023-04-01 15:02:08] [INFO ] Computed 12 invariants in 21349 ms
[2023-04-01 15:02:13] [INFO ] Flatten gal took : 51288 ms
[2023-04-01 15:02:22] [INFO ] After 13577ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:455
[2023-04-01 15:02:33] [INFO ] [Nat]Absence check using 12 positive place invariants in 22 ms returned sat
java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")...
at fr.lip6.move.gal.structural.smt.SMTUtils.execAndCheckResult(SMTUtils.java:251)
at fr.lip6.move.gal.structural.smt.DeadlockTester.verifyPossible(DeadlockTester.java:632)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMTIncremental(DeadlockTester.java:353)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMT(DeadlockTester.java:226)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.applyReductions(ReachabilitySolver.java:96)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.applyReachabilitySolver(GlobalPropertySolver.java:724)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.solveProperty(GlobalPropertySolver.java:558)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.preSolveLiveness(GlobalPropertySolver.java:412)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.preStableMarking(GlobalPropertySolver.java:321)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.solveProperty(GlobalPropertySolver.java:294)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:426)
at fr.lip6.move.gal.application.Application.start(Application.java:182)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:45)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:402)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:568)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2023-04-01 15:02:47] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
[2023-04-01 15:02:47] [INFO ] After 25018ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :0 real:455
Fused 455 Parikh solutions to 1 different solutions.
Parikh walk visited 0 properties in 0 ms.
Support contains 455 out of 1317 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 1317/1317 places, 357746/357746 transitions.
Drop transitions removed 33 transitions
Reduce isomorphic transitions removed 33 transitions.
Drop transitions removed 648 transitions
Trivial Post-agglo rules discarded 648 transitions
Performed 648 trivial Post agglomeration. Transition count delta: 648
Iterating post reduction 0 with 681 rules applied. Total rules applied 681 place count 1317 transition count 357065
Reduce places removed 648 places and 0 transitions.
Iterating post reduction 1 with 648 rules applied. Total rules applied 1329 place count 669 transition count 357065
Performed 22 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 2 with 22 Pre rules applied. Total rules applied 1329 place count 669 transition count 357043
Deduced a syphon composed of 22 places in 495 ms
[2023-04-01 15:03:01] [INFO ] Flatten gal took : 48374 ms
Reduce places removed 22 places and 0 transitions.
Iterating global reduction 2 with 44 rules applied. Total rules applied 1373 place count 647 transition count 357043
[2023-04-01 15:03:08] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality3252851301478010219.gal : 6755 ms
[2023-04-01 15:03:08] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality7339191683733496697.prop : 4 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303301559/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality3252851301478010219.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality7339191683733496697.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303301559/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...328
Discarding 1 places :
Symmetric choice reduction at 2 with 1 rule applications. Total rules 1374 place count 646 transition count 357042
Iterating global reduction 2 with 1 rules applied. Total rules applied 1375 place count 646 transition count 357042

BK_STOP 1680361450542

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StableMarking = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303301559.jar
+ VERSION=202303301559
+ echo 'Running Version 202303301559'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="StigmergyElection-PT-11b"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is StigmergyElection-PT-11b, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r467-smll-167912657600443"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/StigmergyElection-PT-11b.tgz
mv StigmergyElection-PT-11b execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StableMarking.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;