Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r453-smll-167912645600535.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is StigmergyCommit-PT-10b, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r453-smll-167912645600535
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 416M
-rw-r--r-- 1 mcc users 8.0K Feb 26 11:25 CTLCardinality.txt
-rw-r--r-- 1 mcc users 87K Feb 26 11:25 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.8K Feb 26 11:18 CTLFireability.txt
-rw-r--r-- 1 mcc users 60K Feb 26 11:18 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K Feb 25 17:13 LTLCardinality.txt
-rw-r--r-- 1 mcc users 22K Feb 25 17:13 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K Feb 25 17:13 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 25 17:13 LTLFireability.xml
-rw-r--r-- 1 mcc users 9.3K Feb 26 11:52 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 90K Feb 26 11:52 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 9.8K Feb 26 11:36 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 81K Feb 26 11:36 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 17:13 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 17:13 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 equiv_col
-rw-r--r-- 1 mcc users 4 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 416M Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-00
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-01
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-02
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-03
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-04
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-05
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-06
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-07
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-08
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-09
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-10
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-11
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-12
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-13
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-14
FORMULA_NAME StigmergyCommit-PT-10b-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1679395799549

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityFireability
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=StigmergyCommit-PT-10b
Not applying reductions.
Model is PT
ReachabilityFireability PT
Running Version 202303021504
[2023-03-21 10:50:02] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityFireability, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-21 10:50:02] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-21 10:50:21] [INFO ] Load time of PNML (sax parser for PT used): 18626 ms
[2023-03-21 10:50:22] [INFO ] Transformed 3352 places.
[2023-03-21 10:50:23] [INFO ] Transformed 359880 transitions.
[2023-03-21 10:50:23] [INFO ] Found NUPN structural information;
[2023-03-21 10:50:23] [INFO ] Parsed PT model containing 3352 places and 359880 transitions and 7847007 arcs in 20715 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityFireability.xml in 98 ms.
Working with output stream class java.io.PrintStream
Incomplete random walk after 10000 steps, including 50 resets, run finished after 5550 ms. (steps per millisecond=1 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 76 ms. (steps per millisecond=13 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 68 ms. (steps per millisecond=14 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 75 ms. (steps per millisecond=13 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 110 ms. (steps per millisecond=9 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 106 ms. (steps per millisecond=9 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 315 ms. (steps per millisecond=3 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 47 ms. (steps per millisecond=21 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 49 ms. (steps per millisecond=20 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1000 steps, including 2 resets, run finished after 44 ms. (steps per millisecond=22 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 53 ms. (steps per millisecond=18 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 64 ms. (steps per millisecond=15 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 266 ms. (steps per millisecond=3 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 84 ms. (steps per millisecond=11 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1000 steps, including 2 resets, run finished after 48 ms. (steps per millisecond=20 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1000 steps, including 2 resets, run finished after 64 ms. (steps per millisecond=15 ) properties (out of 16) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 332 ms. (steps per millisecond=3 ) properties (out of 16) seen :0
Interrupted probabilistic random walk after 8579 steps, run timeout after 21001 ms. (steps per millisecond=0 ) properties seen :{}
Probabilistic random walk after 8579 steps, saw 6096 distinct states, run finished after 21003 ms. (steps per millisecond=0 ) properties seen :0
Running SMT prover for 16 properties.
// Phase 1: matrix 359880 rows 3352 cols
[2023-03-21 10:51:28] [INFO ] Flatten gal took : 52137 ms
[2023-03-21 10:51:31] [INFO ] Computed 12 place invariants in 34069 ms
[2023-03-21 10:51:34] [INFO ] [Real]Absence check using 12 positive place invariants in 35 ms returned sat
java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Error writing to Z3 solver: java.io.IOException: Broken pipe")...
at fr.lip6.move.gal.structural.smt.SMTUtils.execAndCheckResult(SMTUtils.java:251)
at fr.lip6.move.gal.structural.smt.DeadlockTester.verifyPossible(DeadlockTester.java:629)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMTIncremental(DeadlockTester.java:339)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMT(DeadlockTester.java:223)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.applyReductions(ReachabilitySolver.java:95)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:902)
at fr.lip6.move.gal.application.Application.start(Application.java:178)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:45)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:402)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:568)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2023-03-21 10:51:56] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
[2023-03-21 10:51:56] [INFO ] After 25093ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0
Fused 16 Parikh solutions to 1 different solutions.
Parikh walk visited 0 properties in 1 ms.
Support contains 84 out of 3352 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 3352/3352 places, 359880/359880 transitions.
Graph (trivial) has 2999 edges and 3352 vertex of which 231 / 3352 are part of one of the 33 SCC in 66 ms
Free SCC test removed 198 places
Drop transitions removed 253 transitions
Reduce isomorphic transitions removed 253 transitions.
Graph (complete) has 6181 edges and 3154 vertex of which 3132 are kept as prefixes of interest. Removing 22 places using SCC suffix rule.1743 ms
Discarding 22 places :
Also discarding 11 output transitions
Drop transitions removed 11 transitions
Drop transitions removed 11 transitions
Reduce isomorphic transitions removed 11 transitions.
Drop transitions removed 2256 transitions
Trivial Post-agglo rules discarded 2256 transitions
Performed 2256 trivial Post agglomeration. Transition count delta: 2256
Iterating post reduction 0 with 2267 rules applied. Total rules applied 2269 place count 3132 transition count 357349
Reduce places removed 2256 places and 0 transitions.
Ensure Unique test removed 11 transitions
Reduce isomorphic transitions removed 11 transitions.
Drop transitions removed 11 transitions
Trivial Post-agglo rules discarded 11 transitions
Performed 11 trivial Post agglomeration. Transition count delta: 11
Iterating post reduction 1 with 2278 rules applied. Total rules applied 4547 place count 876 transition count 357327
Reduce places removed 11 places and 0 transitions.
Performed 66 Post agglomeration using F-continuation condition.Transition count delta: 66
Iterating post reduction 2 with 77 rules applied. Total rules applied 4624 place count 865 transition count 357261
Reduce places removed 66 places and 0 transitions.
Iterating post reduction 3 with 66 rules applied. Total rules applied 4690 place count 799 transition count 357261
[2023-03-21 10:52:16] [INFO ] Flatten gal took : 48136 ms
Performed 198 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 4 with 198 Pre rules applied. Total rules applied 4690 place count 799 transition count 357063
Deduced a syphon composed of 198 places in 484 ms
Reduce places removed 198 places and 0 transitions.
Iterating global reduction 4 with 396 rules applied. Total rules applied 5086 place count 601 transition count 357063
[2023-03-21 10:52:24] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality15137813620712800162.gal : 7143 ms
[2023-03-21 10:52:24] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality5747872980678367152.prop : 8 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality15137813620712800162.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality5747872980678367152.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Discarding 190 places :
Symmetric choice reduction at 4 with 190 rule applications. Total rules 5276 place count 411 transition count 356873
Iterating global reduction 4 with 190 rules applied. Total rules applied 5466 place count 411 transition count 356873
Ensure Unique test removed 44 transitions
Reduce isomorphic transitions removed 44 transitions.
Iterating post reduction 4 with 44 rules applied. Total rules applied 5510 place count 411 transition count 356829
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 5 with 1 Pre rules applied. Total rules applied 5510 place count 411 transition count 356828

BK_STOP 1679396021158

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityFireability = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="StigmergyCommit-PT-10b"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is StigmergyCommit-PT-10b, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r453-smll-167912645600535"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/StigmergyCommit-PT-10b.tgz
mv StigmergyCommit-PT-10b execution
cd execution
if [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "UpperBounds" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] || [ "ReachabilityFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;