Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r261-smll-167863535900110.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is NeighborGrid-PT-d5n4m1t35, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r261-smll-167863535900110
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 59M
-rw-r--r-- 1 mcc users 7.6K Feb 26 09:55 CTLCardinality.txt
-rw-r--r-- 1 mcc users 72K Feb 26 09:55 CTLCardinality.xml
-rw-r--r-- 1 mcc users 7.7K Feb 26 09:51 CTLFireability.txt
-rw-r--r-- 1 mcc users 53K Feb 26 09:51 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.4K Jan 29 11:40 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.7K Feb 25 16:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K Feb 25 16:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.5K Feb 25 16:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 20K Feb 25 16:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 16K Feb 26 10:15 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 149K Feb 26 10:15 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 14K Feb 26 10:07 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 79K Feb 26 10:07 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K Feb 25 16:27 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K Feb 25 16:27 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 equiv_col
-rw-r--r-- 1 mcc users 10 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 iscolored
-rwxr-xr-x 1 mcc users 59M Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-00
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-01
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-02
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-03
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-04
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-05
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-06
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-07
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-08
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-09
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-10
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-11
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-12
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-13
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-14
FORMULA_NAME NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-15

=== Now, execution of the tool begins

BK_START 1678737853211

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=NeighborGrid-PT-d5n4m1t35
Not applying reductions.
Model is PT
ReachabilityCardinality PT
Running Version 202303021504
[2023-03-13 20:04:16] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-13 20:04:16] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-13 20:04:18] [INFO ] Load time of PNML (sax parser for PT used): 2553 ms
[2023-03-13 20:04:18] [INFO ] Transformed 1024 places.
[2023-03-13 20:04:19] [INFO ] Transformed 196608 transitions.
[2023-03-13 20:04:19] [INFO ] Parsed PT model containing 1024 places and 196608 transitions and 393216 arcs in 3036 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityCardinality.xml in 35 ms.
Working with output stream class java.io.PrintStream
[2023-03-13 20:04:24] [INFO ] Flatten gal took : 3660 ms
[2023-03-13 20:04:27] [INFO ] Flatten gal took : 2519 ms
[2023-03-13 20:04:27] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality15677102176209392593.gal : 664 ms
[2023-03-13 20:04:27] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality5142657023451391745.prop : 3 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality15677102176209392593.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality5142657023451391745.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality5142657023451391745.prop.
Interrupted random walk after 3150 steps, including 0 resets, run timeout after 30002 ms. (steps per millisecond=0 ) properties seen 8
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-14 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-13 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-12 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-11 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-09 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-06 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-03 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-01 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10001 steps, including 0 resets, run finished after 250 ms. (steps per millisecond=40 ) properties (out of 8) seen :0
Incomplete Best-First random walk after 10001 steps, including 0 resets, run finished after 255 ms. (steps per millisecond=39 ) properties (out of 8) seen :0
Incomplete Best-First random walk after 10001 steps, including 0 resets, run finished after 248 ms. (steps per millisecond=40 ) properties (out of 8) seen :0
Incomplete Best-First random walk after 10001 steps, including 0 resets, run finished after 299 ms. (steps per millisecond=33 ) properties (out of 8) seen :0
Incomplete Best-First random walk after 10001 steps, including 0 resets, run finished after 212 ms. (steps per millisecond=47 ) properties (out of 8) seen :0
Incomplete Best-First random walk after 10001 steps, including 0 resets, run finished after 200 ms. (steps per millisecond=50 ) properties (out of 8) seen :0
Incomplete Best-First random walk after 10001 steps, including 0 resets, run finished after 188 ms. (steps per millisecond=53 ) properties (out of 8) seen :0
Incomplete Best-First random walk after 10001 steps, including 0 resets, run finished after 184 ms. (steps per millisecond=54 ) properties (out of 8) seen :0
Running SMT prover for 8 properties.
// Phase 1: matrix 196608 rows 1024 cols
[2023-03-13 20:04:56] [INFO ] Computed 1 place invariants in 4629 ms
[2023-03-13 20:04:57] [INFO ] After 800ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:8
[2023-03-13 20:04:58] [INFO ] [Nat]Absence check using 1 positive place invariants in 11 ms returned sat
java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Error writing to Z3 solver: java.io.IOException: Stream closed...
at fr.lip6.move.gal.structural.smt.SMTUtils.execAndCheckResult(SMTUtils.java:251)
at fr.lip6.move.gal.structural.smt.DeadlockTester.verifyPossible(DeadlockTester.java:629)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMTIncremental(DeadlockTester.java:350)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMT(DeadlockTester.java:223)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.applyReductions(ReachabilitySolver.java:95)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:902)
at fr.lip6.move.gal.application.Application.start(Application.java:178)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:45)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:402)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:568)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2023-03-13 20:05:22] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
[2023-03-13 20:05:22] [INFO ] After 25067ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :0 real:8
Fused 8 Parikh solutions to 1 different solutions.
Parikh walk visited 0 properties in 0 ms.
Support contains 203 out of 1024 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 1024/1024 places, 196608/196608 transitions.
Graph (trivial) has 126326 edges and 1024 vertex of which 821 / 1024 are part of one of the 1 SCC in 164 ms
Free SCC test removed 820 places
Drop transitions removed 126326 transitions
Ensure Unique test removed 62206 transitions
Reduce isomorphic transitions removed 188532 transitions.
Drop transitions removed 2732 transitions
Redundant transition composition rules discarded 2732 transitions
Iterating global reduction 0 with 2732 rules applied. Total rules applied 2733 place count 204 transition count 5344
Applied a total of 2733 rules in 7503 ms. Remains 204 /1024 variables (removed 820) and now considering 5344/196608 (removed 191264) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 7506 ms. Remains : 204/1024 places, 5344/196608 transitions.
Incomplete random walk after 10186 steps, including 2 resets, run finished after 367 ms. (steps per millisecond=27 ) properties (out of 8) seen :3
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-15 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-02 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-00 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10001 steps, including 1 resets, run finished after 59 ms. (steps per millisecond=169 ) properties (out of 5) seen :0
Incomplete Best-First random walk after 10001 steps, including 1 resets, run finished after 53 ms. (steps per millisecond=188 ) properties (out of 5) seen :0
Incomplete Best-First random walk after 10001 steps, including 1 resets, run finished after 55 ms. (steps per millisecond=181 ) properties (out of 5) seen :0
Incomplete Best-First random walk after 10001 steps, including 1 resets, run finished after 52 ms. (steps per millisecond=192 ) properties (out of 5) seen :0
Incomplete Best-First random walk after 10001 steps, including 1 resets, run finished after 48 ms. (steps per millisecond=208 ) properties (out of 5) seen :0
Running SMT prover for 5 properties.
// Phase 1: matrix 5344 rows 204 cols
[2023-03-13 20:05:31] [INFO ] Computed 1 place invariants in 34 ms
[2023-03-13 20:05:31] [INFO ] After 116ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:5
[2023-03-13 20:05:31] [INFO ] [Nat]Absence check using 1 positive place invariants in 3 ms returned sat
[2023-03-13 20:05:33] [INFO ] After 1848ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :5
[2023-03-13 20:05:34] [INFO ] After 3001ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :5
Attempting to minimize the solution found.
Minimization took 697 ms.
[2023-03-13 20:05:35] [INFO ] After 3843ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :5
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-10 FALSE TECHNIQUES TOPOLOGICAL PARIKH_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-04 FALSE TECHNIQUES TOPOLOGICAL PARIKH_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-05 TRUE TECHNIQUES TOPOLOGICAL PARIKH_WALK
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-07 TRUE TECHNIQUES TOPOLOGICAL PARIKH_WALK
Finished Parikh walk after 786 steps, including 0 resets, run visited all 1 properties in 18 ms. (steps per millisecond=43 )
FORMULA NeighborGrid-PT-d5n4m1t35-ReachabilityCardinality-08 TRUE TECHNIQUES TOPOLOGICAL PARIKH_WALK
Parikh walk visited 5 properties in 284 ms.
ITS runner failed with exception null
java.lang.InterruptedException
at java.base/java.lang.Object.wait(Native Method)
at java.base/java.lang.Thread.join(Thread.java:1304)
at java.base/java.lang.Thread.join(Thread.java:1372)
at fr.lip6.move.gal.application.runner.AbstractRunner.join(AbstractRunner.java:27)
at fr.lip6.move.gal.application.runner.its.ITSRunner.join(ITSRunner.java:177)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.verifyWithSDD(GlobalPropertySolver.java:675)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.lambda$2(ReachabilitySolver.java:63)
at java.base/java.lang.Thread.run(Thread.java:833)
All properties solved without resorting to model-checking.
Total runtime 79676 ms.

BK_STOP 1678737937334

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="NeighborGrid-PT-d5n4m1t35"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is NeighborGrid-PT-d5n4m1t35, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r261-smll-167863535900110"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/NeighborGrid-PT-d5n4m1t35.tgz
mv NeighborGrid-PT-d5n4m1t35 execution
cd execution
if [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "UpperBounds" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] || [ "ReachabilityCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;