Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r229-tall-167856413600686.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
...................................
=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is Medical-PT-10, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r229-tall-167856413600686
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 3.5M
-rw-r--r-- 1 mcc users 6.7K Feb 25 14:39 CTLCardinality.txt
-rw-r--r-- 1 mcc users 66K Feb 25 14:39 CTLCardinality.xml
-rw-r--r-- 1 mcc users 4.8K Feb 25 14:36 CTLFireability.txt
-rw-r--r-- 1 mcc users 41K Feb 25 14:36 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K Feb 25 16:23 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Feb 25 16:23 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Feb 25 16:23 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K Feb 25 16:23 LTLFireability.xml
-rw-r--r-- 1 mcc users 9.4K Feb 25 14:43 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 85K Feb 25 14:43 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 4.9K Feb 25 14:40 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 34K Feb 25 14:40 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Feb 25 16:23 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K Feb 25 16:23 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 3 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 3.1M Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-00
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-01
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-02
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-03
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-04
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-05
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-06
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-07
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-08
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-09
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-10
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-11
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-12
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-13
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-14
FORMULA_NAME Medical-PT-10-ReachabilityCardinality-15

=== Now, execution of the tool begins

BK_START 1679532356794

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Medical-PT-10
Not applying reductions.
Model is PT
ReachabilityCardinality PT
Running Version 202303021504
[2023-03-23 00:45:58] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-23 00:45:58] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-23 00:45:58] [INFO ] Load time of PNML (sax parser for PT used): 252 ms
[2023-03-23 00:45:58] [INFO ] Transformed 312 places.
[2023-03-23 00:45:58] [INFO ] Transformed 5431 transitions.
[2023-03-23 00:45:58] [INFO ] Parsed PT model containing 312 places and 5431 transitions and 28790 arcs in 351 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityCardinality.xml in 14 ms.
Working with output stream class java.io.PrintStream
Deduced a syphon composed of 242 places in 20 ms
Reduce places removed 242 places and 5204 transitions.
Reduce places removed 1 places and 0 transitions.
FORMULA Medical-PT-10-ReachabilityCardinality-00 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-01 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-02 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-03 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-04 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-05 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-06 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-07 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-08 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-09 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-10 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-13 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-10-ReachabilityCardinality-15 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Incomplete random walk after 10004 steps, including 56 resets, run finished after 249 ms. (steps per millisecond=40 ) properties (out of 3) seen :0
Incomplete Best-First random walk after 10001 steps, including 7 resets, run finished after 59 ms. (steps per millisecond=169 ) properties (out of 3) seen :0
Incomplete Best-First random walk after 10000 steps, including 7 resets, run finished after 53 ms. (steps per millisecond=188 ) properties (out of 3) seen :0
[2023-03-23 00:45:59] [INFO ] Flatten gal took : 78 ms
Incomplete Best-First random walk after 10001 steps, including 12 resets, run finished after 66 ms. (steps per millisecond=151 ) properties (out of 3) seen :0
[2023-03-23 00:45:59] [INFO ] Flatten gal took : 24 ms
[2023-03-23 00:45:59] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality9620608554891599312.gal : 14 ms
[2023-03-23 00:45:59] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality6306424131615829697.prop : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality9620608554891599312.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality6306424131615829697.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...328
Loading property file /tmp/ReachabilityCardinality6306424131615829697.prop.
SDD proceeding with computation,3 properties remain. new max is 4
SDD size :1 after 4
SDD proceeding with computation,3 properties remain. new max is 8
SDD size :4 after 10
SDD proceeding with computation,3 properties remain. new max is 16
SDD size :10 after 35
SDD proceeding with computation,3 properties remain. new max is 32
SDD size :35 after 120
SDD proceeding with computation,3 properties remain. new max is 64
SDD size :120 after 1012
SDD proceeding with computation,3 properties remain. new max is 128
SDD size :1012 after 32978
SDD proceeding with computation,3 properties remain. new max is 256
SDD size :32978 after 180554
SDD proceeding with computation,3 properties remain. new max is 512
SDD size :180554 after 474562
SDD proceeding with computation,3 properties remain. new max is 1024
SDD size :474562 after 1.06143e+06
Interrupted probabilistic random walk after 404379 steps, run timeout after 3001 ms. (steps per millisecond=134 ) properties seen :{}
Probabilistic random walk after 404379 steps, saw 238672 distinct states, run finished after 3002 ms. (steps per millisecond=134 ) properties seen :0
Running SMT prover for 3 properties.
[2023-03-23 00:46:02] [INFO ] Flow matrix only has 182 transitions (discarded 45 similar events)
// Phase 1: matrix 182 rows 69 cols
[2023-03-23 00:46:02] [INFO ] Computed 10 place invariants in 12 ms
[2023-03-23 00:46:02] [INFO ] [Real]Absence check using 10 positive place invariants in 13 ms returned sat
[2023-03-23 00:46:02] [INFO ] After 199ms SMT Verify possible using all constraints in real domain returned unsat :1 sat :0 real:2
[2023-03-23 00:46:02] [INFO ] [Nat]Absence check using 10 positive place invariants in 2 ms returned sat
[2023-03-23 00:46:02] [INFO ] After 247ms SMT Verify possible using state equation in natural domain returned unsat :1 sat :2
[2023-03-23 00:46:02] [INFO ] State equation strengthened by 56 read => feed constraints.
[2023-03-23 00:46:02] [INFO ] After 25ms SMT Verify possible using 56 Read/Feed constraints in natural domain returned unsat :1 sat :2
[2023-03-23 00:46:02] [INFO ] Deduced a trap composed of 9 places in 71 ms of which 5 ms to minimize.
[2023-03-23 00:46:02] [INFO ] Deduced a trap composed of 5 places in 56 ms of which 1 ms to minimize.
[2023-03-23 00:46:02] [INFO ] Deduced a trap composed of 17 places in 56 ms of which 0 ms to minimize.
[2023-03-23 00:46:03] [INFO ] Deduced a trap composed of 9 places in 60 ms of which 1 ms to minimize.
[2023-03-23 00:46:03] [INFO ] Trap strengthening (SAT) tested/added 5/4 trap constraints in 291 ms
[2023-03-23 00:46:03] [INFO ] Deduced a trap composed of 12 places in 62 ms of which 1 ms to minimize.
[2023-03-23 00:46:03] [INFO ] Deduced a trap composed of 4 places in 57 ms of which 1 ms to minimize.
[2023-03-23 00:46:03] [INFO ] Deduced a trap composed of 10 places in 42 ms of which 1 ms to minimize.
[2023-03-23 00:46:03] [INFO ] Trap strengthening (SAT) tested/added 4/3 trap constraints in 192 ms
[2023-03-23 00:46:03] [INFO ] After 521ms SMT Verify possible using trap constraints in natural domain returned unsat :1 sat :2
Attempting to minimize the solution found.
Minimization took 13 ms.
[2023-03-23 00:46:03] [INFO ] After 851ms SMT Verify possible using all constraints in natural domain returned unsat :1 sat :2
FORMULA Medical-PT-10-ReachabilityCardinality-11 TRUE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
Fused 3 Parikh solutions to 2 different solutions.
Parikh walk visited 0 properties in 12 ms.
Support contains 5 out of 69 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 69/69 places, 227/227 transitions.
Graph (complete) has 347 edges and 69 vertex of which 67 are kept as prefixes of interest. Removing 2 places using SCC suffix rule.1 ms
Discarding 2 places :
Also discarding 0 output transitions
Performed 3 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 3 Pre rules applied. Total rules applied 1 place count 67 transition count 224
Deduced a syphon composed of 3 places in 1 ms
Reduce places removed 3 places and 0 transitions.
Iterating global reduction 0 with 6 rules applied. Total rules applied 7 place count 64 transition count 224
Performed 1 Post agglomeration using F-continuation condition.Transition count delta: 0
Deduced a syphon composed of 1 places in 1 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 0 with 2 rules applied. Total rules applied 9 place count 63 transition count 224
Free-agglomeration rule applied 2 times.
Iterating global reduction 0 with 2 rules applied. Total rules applied 11 place count 63 transition count 222
Reduce places removed 2 places and 0 transitions.
Iterating post reduction 0 with 2 rules applied. Total rules applied 13 place count 61 transition count 222
Applied a total of 13 rules in 50 ms. Remains 61 /69 variables (removed 8) and now considering 222/227 (removed 5) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 51 ms. Remains : 61/69 places, 222/227 transitions.
Incomplete random walk after 10004 steps, including 2 resets, run finished after 37 ms. (steps per millisecond=270 ) properties (out of 2) seen :0
Incomplete Best-First random walk after 10000 steps, including 2 resets, run finished after 35 ms. (steps per millisecond=285 ) properties (out of 2) seen :0
Incomplete Best-First random walk after 10000 steps, including 2 resets, run finished after 37 ms. (steps per millisecond=270 ) properties (out of 2) seen :0
Interrupted probabilistic random walk after 572355 steps, run timeout after 3001 ms. (steps per millisecond=190 ) properties seen :{}
Probabilistic random walk after 572355 steps, saw 324898 distinct states, run finished after 3001 ms. (steps per millisecond=190 ) properties seen :0
Running SMT prover for 2 properties.
[2023-03-23 00:46:06] [INFO ] Flow matrix only has 176 transitions (discarded 46 similar events)
// Phase 1: matrix 176 rows 61 cols
[2023-03-23 00:46:06] [INFO ] Computed 8 place invariants in 8 ms
[2023-03-23 00:46:06] [INFO ] After 29ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:2
[2023-03-23 00:46:06] [INFO ] [Nat]Absence check using 8 positive place invariants in 1 ms returned sat
[2023-03-23 00:46:06] [INFO ] After 36ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :2
[2023-03-23 00:46:06] [INFO ] State equation strengthened by 57 read => feed constraints.
[2023-03-23 00:46:06] [INFO ] After 31ms SMT Verify possible using 57 Read/Feed constraints in natural domain returned unsat :0 sat :2
[2023-03-23 00:46:06] [INFO ] After 55ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :2
Attempting to minimize the solution found.
Minimization took 16 ms.
[2023-03-23 00:46:06] [INFO ] After 136ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :2
Parikh walk visited 0 properties in 1 ms.
Support contains 5 out of 61 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 61/61 places, 222/222 transitions.
Applied a total of 0 rules in 10 ms. Remains 61 /61 variables (removed 0) and now considering 222/222 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 10 ms. Remains : 61/61 places, 222/222 transitions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 61/61 places, 222/222 transitions.
Applied a total of 0 rules in 7 ms. Remains 61 /61 variables (removed 0) and now considering 222/222 (removed 0) transitions.
[2023-03-23 00:46:06] [INFO ] Flow matrix only has 176 transitions (discarded 46 similar events)
[2023-03-23 00:46:06] [INFO ] Invariant cache hit.
[2023-03-23 00:46:06] [INFO ] Implicit Places using invariants in 68 ms returned []
[2023-03-23 00:46:06] [INFO ] Flow matrix only has 176 transitions (discarded 46 similar events)
[2023-03-23 00:46:06] [INFO ] Invariant cache hit.
SDD proceeding with computation,3 properties remain. new max is 2048
SDD size :1.06143e+06 after 2.23403e+06
[2023-03-23 00:46:06] [INFO ] State equation strengthened by 57 read => feed constraints.
[2023-03-23 00:46:06] [INFO ] Implicit Places using invariants and state equation in 154 ms returned []
Implicit Place search using SMT with State Equation took 223 ms to find 0 implicit places.
[2023-03-23 00:46:06] [INFO ] Redundant transitions in 7 ms returned []
[2023-03-23 00:46:06] [INFO ] Flow matrix only has 176 transitions (discarded 46 similar events)
[2023-03-23 00:46:06] [INFO ] Invariant cache hit.
[2023-03-23 00:46:06] [INFO ] Dead Transitions using invariants and state equation in 114 ms found 0 transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 358 ms. Remains : 61/61 places, 222/222 transitions.
Drop transitions removed 13 transitions
Ensure Unique test removed 39 transitions
Reduce isomorphic transitions removed 52 transitions.
Iterating post reduction 0 with 52 rules applied. Total rules applied 52 place count 61 transition count 170
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 1 with 1 Pre rules applied. Total rules applied 52 place count 61 transition count 169
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 1 with 2 rules applied. Total rules applied 54 place count 60 transition count 169
Performed 1 Post agglomeration using F-continuation condition.Transition count delta: -17
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 1 with 2 rules applied. Total rules applied 56 place count 59 transition count 186
Free-agglomeration rule applied 2 times.
Iterating global reduction 1 with 2 rules applied. Total rules applied 58 place count 59 transition count 184
Reduce places removed 2 places and 0 transitions.
Iterating post reduction 1 with 2 rules applied. Total rules applied 60 place count 57 transition count 184
Free-agglomeration rule (complex) applied 1 times.
Iterating global reduction 2 with 1 rules applied. Total rules applied 61 place count 57 transition count 195
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 2 with 1 rules applied. Total rules applied 62 place count 56 transition count 195
Applied a total of 62 rules in 21 ms. Remains 56 /61 variables (removed 5) and now considering 195/222 (removed 27) transitions.
Running SMT prover for 2 properties.
// Phase 1: matrix 195 rows 56 cols
[2023-03-23 00:46:07] [INFO ] Computed 10 place invariants in 2 ms
[2023-03-23 00:46:07] [INFO ] After 30ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:2
[2023-03-23 00:46:07] [INFO ] [Nat]Absence check using 10 positive place invariants in 2 ms returned sat
[2023-03-23 00:46:07] [INFO ] After 37ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :2
[2023-03-23 00:46:07] [INFO ] State equation strengthened by 4 read => feed constraints.
[2023-03-23 00:46:07] [INFO ] After 10ms SMT Verify possible using 4 Read/Feed constraints in natural domain returned unsat :0 sat :2
[2023-03-23 00:46:07] [INFO ] After 26ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :2
Attempting to minimize the solution found.
Minimization took 10 ms.
[2023-03-23 00:46:07] [INFO ] After 121ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :2
[2023-03-23 00:46:07] [INFO ] Flatten gal took : 15 ms
[2023-03-23 00:46:07] [INFO ] Flatten gal took : 14 ms
[2023-03-23 00:46:07] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality4865243588935815251.gal : 4 ms
[2023-03-23 00:46:07] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality13284945607106979445.prop : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality4865243588935815251.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality13284945607106979445.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality13284945607106979445.prop.
SDD proceeding with computation,2 properties remain. new max is 4
SDD size :1 after 5
SDD proceeding with computation,2 properties remain. new max is 8
SDD size :5 after 10
SDD proceeding with computation,2 properties remain. new max is 16
SDD size :10 after 43
Invariant property Medical-PT-10-ReachabilityCardinality-14 does not hold.
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :43 after 767
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :767 after 1889
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :1889 after 4067
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :4067 after 8357
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :8357 after 16871
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :16871 after 33833
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :33833 after 67691
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :67691 after 135341
Detected timeout of ITS tools.
[2023-03-23 00:46:22] [INFO ] Flatten gal took : 13 ms
[2023-03-23 00:46:22] [INFO ] Applying decomposition
[2023-03-23 00:46:22] [INFO ] Flatten gal took : 12 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph4208439345760191767.txt' '-o' '/tmp/graph4208439345760191767.bin' '-w' '/tmp/graph4208439345760191767.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph4208439345760191767.bin' '-l' '-1' '-v' '-w' '/tmp/graph4208439345760191767.weights' '-q' '0' '-e' '0.001'
[2023-03-23 00:46:22] [INFO ] Decomposing Gal with order
[2023-03-23 00:46:22] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-23 00:46:22] [INFO ] Removed a total of 147 redundant transitions.
[2023-03-23 00:46:22] [INFO ] Flatten gal took : 47 ms
[2023-03-23 00:46:22] [INFO ] Fuse similar labels procedure discarded/fused a total of 81 labels/synchronizations in 5 ms.
[2023-03-23 00:46:22] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality15476074867392612565.gal : 3 ms
[2023-03-23 00:46:22] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality12614446367317600565.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality15476074867392612565.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality12614446367317600565.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...330
Loading property file /tmp/ReachabilityCardinality12614446367317600565.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 5
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :5 after 10
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :10 after 21
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :21 after 791
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :791 after 9701
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :9701 after 237789
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :237789 after 3.62639e+06
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :3.62639e+06 after 6.0113e+07
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :6.0113e+07 after 9.45297e+08
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :9.45297e+08 after 1.49935e+10
SDD proceeding with computation,1 properties remain. new max is 4096
SDD size :1.49935e+10 after 2.3885e+11
SDD proceeding with computation,3 properties remain. new max is 4096
SDD size :2.23403e+06 after 4.57809e+06
Detected timeout of ITS tools.
Built C files in :
/tmp/ltsmin12492411540708225186
[2023-03-23 00:46:37] [INFO ] Built C files in 18ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin12492411540708225186
Running compilation step : cd /tmp/ltsmin12492411540708225186;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/limit_time.pl' '3' 'gcc' '-c' '-I/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/include/' '-I.' '-std=c99' '-fPIC' '-O0' 'model.c'
Compilation finished in 434 ms.
Running link step : cd /tmp/ltsmin12492411540708225186;'gcc' '-shared' '-o' 'gal.so' 'model.o'
Link finished in 41 ms.
Running LTSmin : cd /tmp/ltsmin12492411540708225186;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/pins2lts-mc-linux64' './gal.so' '--threads=8' '--when' '-i' 'MedicalPT10ReachabilityCardinality12==true'
LTSmin run took 82 ms.
Found Violation
ITS runner failed with exception null
java.lang.InterruptedException
at java.base/java.lang.Object.wait(Native Method)
at java.base/java.lang.Thread.join(Thread.java:1304)
at java.base/java.lang.Thread.join(Thread.java:1372)
at fr.lip6.move.gal.application.runner.AbstractRunner.join(AbstractRunner.java:27)
at fr.lip6.move.gal.application.runner.its.ITSRunner.join(ITSRunner.java:177)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.verifyWithSDD(GlobalPropertySolver.java:675)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.lambda$2(ReachabilitySolver.java:63)
at java.base/java.lang.Thread.run(Thread.java:833)
[2023-03-23 00:46:38] [INFO ] Flatten gal took : 37 ms
[2023-03-23 00:46:38] [INFO ] Applying decomposition
[2023-03-23 00:46:38] [INFO ] Flatten gal took : 13 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph1577785070661399061.txt' '-o' '/tmp/graph1577785070661399061.bin' '-w' '/tmp/graph1577785070661399061.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph1577785070661399061.bin' '-l' '-1' '-v' '-w' '/tmp/graph1577785070661399061.weights' '-q' '0' '-e' '0.001'
[2023-03-23 00:46:38] [INFO ] Decomposing Gal with order
[2023-03-23 00:46:38] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-23 00:46:38] [INFO ] Removed a total of 90 redundant transitions.
[2023-03-23 00:46:38] [INFO ] Flatten gal took : 26 ms
[2023-03-23 00:46:38] [INFO ] Fuse similar labels procedure discarded/fused a total of 94 labels/synchronizations in 2 ms.
[2023-03-23 00:46:38] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality8524675374751444529.gal : 2 ms
[2023-03-23 00:46:38] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality16036600444004466047.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality8524675374751444529.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality16036600444004466047.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality16036600444004466047.prop.
SDD proceeding with computation,2 properties remain. new max is 4
SDD size :1 after 3
SDD proceeding with computation,2 properties remain. new max is 8
SDD size :3 after 6
SDD proceeding with computation,2 properties remain. new max is 16
SDD size :6 after 15
SDD proceeding with computation,2 properties remain. new max is 32
SDD size :15 after 45
SDD proceeding with computation,2 properties remain. new max is 64
SDD size :45 after 572
SDD proceeding with computation,2 properties remain. new max is 128
SDD size :572 after 1144
SDD proceeding with computation,2 properties remain. new max is 256
SDD size :1144 after 119922
SDD proceeding with computation,2 properties remain. new max is 512
SDD size :119922 after 413930
SDD proceeding with computation,2 properties remain. new max is 1024
SDD size :413930 after 1.0008e+06
SDD proceeding with computation,2 properties remain. new max is 2048
SDD size :1.0008e+06 after 2.1734e+06
SDD proceeding with computation,2 properties remain. new max is 4096
SDD size :2.1734e+06 after 4.51746e+06
SDD proceeding with computation,3 properties remain. new max is 8192
SDD size :4.57809e+06 after 9.26506e+06
SDD proceeding with computation,2 properties remain. new max is 8192
SDD size :4.51746e+06 after 9.20443e+06
SDD proceeding with computation,2 properties remain. new max is 16384
SDD size :9.20443e+06 after 1.848e+07
SDD proceeding with computation,3 properties remain. new max is 16384
SDD size :9.26506e+06 after 1.86001e+07
Detected timeout of ITS tools.
Detected timeout of ITS tools.
[2023-03-23 01:16:38] [INFO ] Flatten gal took : 16 ms
Using solver Z3 to compute partial order matrices.
Built C files in :
/tmp/ltsmin813429170229193519
[2023-03-23 01:16:38] [INFO ] Computing symmetric may disable matrix : 222 transitions.
[2023-03-23 01:16:38] [INFO ] Computation of Complete disable matrix. took 3 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2023-03-23 01:16:38] [INFO ] Computing symmetric may enable matrix : 222 transitions.
[2023-03-23 01:16:38] [INFO ] Computation of Complete enable matrix. took 1 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2023-03-23 01:16:38] [INFO ] Applying decomposition
[2023-03-23 01:16:38] [INFO ] Flatten gal took : 12 ms
[2023-03-23 01:16:38] [INFO ] Computing Do-Not-Accords matrix : 222 transitions.
[2023-03-23 01:16:38] [INFO ] Computation of Completed DNA matrix. took 3 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2023-03-23 01:16:38] [INFO ] Built C files in 38ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin813429170229193519
Running compilation step : cd /tmp/ltsmin813429170229193519;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/limit_time.pl' '360' 'gcc' '-c' '-I/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/include/' '-I.' '-std=c99' '-fPIC' '-O0' 'model.c'
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph2354948503566152141.txt' '-o' '/tmp/graph2354948503566152141.bin' '-w' '/tmp/graph2354948503566152141.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph2354948503566152141.bin' '-l' '-1' '-v' '-w' '/tmp/graph2354948503566152141.weights' '-q' '0' '-e' '0.001'
[2023-03-23 01:16:38] [INFO ] Decomposing Gal with order
[2023-03-23 01:16:38] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-23 01:16:38] [INFO ] Removed a total of 91 redundant transitions.
[2023-03-23 01:16:38] [INFO ] Flatten gal took : 23 ms
[2023-03-23 01:16:38] [INFO ] Fuse similar labels procedure discarded/fused a total of 92 labels/synchronizations in 2 ms.
[2023-03-23 01:16:38] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality12802408052479612330.gal : 2 ms
[2023-03-23 01:16:38] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality16640346732465028461.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality12802408052479612330.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality16640346732465028461.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...330
Loading property file /tmp/ReachabilityCardinality16640346732465028461.prop.
SDD proceeding with computation,2 properties remain. new max is 4
SDD size :1 after 5
SDD proceeding with computation,2 properties remain. new max is 8
SDD size :5 after 10
SDD proceeding with computation,2 properties remain. new max is 16
SDD size :10 after 11
SDD proceeding with computation,2 properties remain. new max is 32
SDD size :11 after 55
SDD proceeding with computation,2 properties remain. new max is 64
SDD size :55 after 977
SDD proceeding with computation,2 properties remain. new max is 128
SDD size :977 after 3122
SDD proceeding with computation,2 properties remain. new max is 256
SDD size :3122 after 7379
SDD proceeding with computation,2 properties remain. new max is 512
SDD size :7379 after 15860
Compilation finished in 480 ms.
Running link step : cd /tmp/ltsmin813429170229193519;'gcc' '-shared' '-o' 'gal.so' 'model.o'
Link finished in 32 ms.
Running LTSmin : cd /tmp/ltsmin813429170229193519;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/pins2lts-mc-linux64' './gal.so' '--threads=8' '-p' '--pins-guards' '--when' '-i' 'MedicalPT10ReachabilityCardinality12==true'
SDD proceeding with computation,2 properties remain. new max is 1024
SDD size :15860 after 32789
SDD proceeding with computation,2 properties remain. new max is 2048
SDD size :32789 after 66614
SDD proceeding with computation,2 properties remain. new max is 4096
SDD size :66614 after 134231
SDD proceeding with computation,2 properties remain. new max is 8192
SDD size :134231 after 269432
TIME LIMIT: Killed by timeout after 3600 seconds
MemTotal: 16393216 kB
MemFree: 9060156 kB
After kill :
MemTotal: 16393216 kB
MemFree: 16069136 kB

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Medical-PT-10"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is Medical-PT-10, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r229-tall-167856413600686"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Medical-PT-10.tgz
mv Medical-PT-10 execution
cd execution
if [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "UpperBounds" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] || [ "ReachabilityCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;