Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r225-tall-167856407900645.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.................................................................................................................
=====================================================================
Generated by BenchKit 2-5348
Executing tool marcie
Input is MAPKbis-PT-5320, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r225-tall-167856407900645
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 760K
-rw-r--r-- 1 mcc users 8.3K Feb 25 16:19 CTLCardinality.txt
-rw-r--r-- 1 mcc users 76K Feb 25 16:19 CTLCardinality.xml
-rw-r--r-- 1 mcc users 11K Feb 25 16:03 CTLFireability.txt
-rw-r--r-- 1 mcc users 47K Feb 25 16:03 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.3K Feb 25 16:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Feb 25 16:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 5.4K Feb 25 16:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 21K Feb 25 16:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 16K Feb 25 16:39 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 131K Feb 25 16:39 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 40K Feb 25 16:29 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 153K Feb 25 16:29 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 16:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 16:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 5 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 170K Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-00
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-01
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-02
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-03
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-04
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-05
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-06
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-07
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-08
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-09
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-10
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-11
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-12
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-13
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-14
FORMULA_NAME MAPKbis-PT-5320-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1678641240391

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=marcie
BK_EXAMINATION=UpperBounds
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=MAPKbis-PT-5320
Not applying reductions.
Model is PT
UpperBounds PT
timeout --kill-after=10s --signal=SIGINT 1m for testing only

Marcie built on Linux at 2019-11-18.
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: /home/mcc/BenchKit/bin//../marcie/bin/marcie --net-file=model.pnml --mcc-file=UpperBounds.xml --memory=6 --mcc-mode

parse successfull
net created successfully

Net: MAPKbis_PT_5320
(NrP: 106 NrTr: 173 NrArc: 986)

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.002sec

net check time: 0m 0.000sec

init dd package: 0m 2.883sec


RS generation: 0m 0.039sec


-> reachability set: #nodes 235 (2.4e+02) #states 8,126,465 (6)



starting MCC model checker
--------------------------

checking: place_bound(MTK1_equals_1)
normalized: place_bound(MTK1_equals_1)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-00 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.007sec

checking: place_bound(FOS_equals_1)
normalized: place_bound(FOS_equals_1)

-> the formula is 0

FORMULA MAPKbis-PT-5320-UpperBounds-01 0 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(TAK1_equals_0)
normalized: place_bound(TAK1_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-02 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(CREB_equals_1)
normalized: place_bound(CREB_equals_1)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-03 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(AP1_equals_1)
normalized: place_bound(AP1_equals_1)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-04 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(EGFR_equals_0)
normalized: place_bound(EGFR_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-05 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(p38_equals_0)
normalized: place_bound(p38_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-06 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(AKT_0)
normalized: place_bound(AKT_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-07 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(ATF2_equals_0)
normalized: place_bound(ATF2_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-08 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(CREB_equals_0)
normalized: place_bound(CREB_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-09 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(JUN_equals_0)
normalized: place_bound(JUN_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-10 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(AKT_equals_1)
normalized: place_bound(AKT_equals_1)

-> the formula is 0

FORMULA MAPKbis-PT-5320-UpperBounds-11 0 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(RAS_equals_0)
normalized: place_bound(RAS_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-12 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(p70_equals_0)
normalized: place_bound(p70_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-13 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(BCL2_equals_0)
normalized: place_bound(BCL2_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-14 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: place_bound(DUSP1_equals_0)
normalized: place_bound(DUSP1_equals_0)

-> the formula is 1

FORMULA MAPKbis-PT-5320-UpperBounds-15 1 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

totally nodes used: 15044 (1.5e+04)
number of garbage collections: 0
fire ops cache: hits/miss/sum: 41203 154671 195874
used/not used/entry size/cache size: 160919 66947945 16 1024MB
basic ops cache: hits/miss/sum: 838 7895 8733
used/not used/entry size/cache size: 20793 16756423 12 192MB
unary ops cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 16777216 8 128MB
abstract ops cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 16777216 12 192MB
state nr cache: hits/miss/sum: 48 235 283
used/not used/entry size/cache size: 235 8388373 32 256MB
max state cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 8388608 32 256MB
uniqueHash elements/entry size/size: 67108864 4 256MB
0 67093838
1 15008
2 18
3 0
4 0
5 0
6 0
7 0
8 0
9 0
>= 10 0

Total processing time: 0m 4.659sec


BK_STOP 1678641245099

--------------------
content from stderr:

check for maximal unmarked siphon
found
The net has a maximal unmarked siphon:
SOS_equals_1
PI3K_equals_1
p70_equals_1
TGFBR_equals_1
MAP3K1_3_equals_1
SPRY_equals_1
TGFBR_stimulus_equals_1
AKT_equals_1
BCL2_equals_1
MEK1_2_equals_1
TAK1_equals_1
FRS2_equals_1
EGFR_stimulus_equals_1
DNA_damage_equals_0
GAB1_equals_1
FGFR3_equals_1
FGFR3_stimulus_equals_1
ERK_equals_1
EGFR_equals_1
GRB2_equals_1
RSK_equals_1
PKC_equals_1
SMAD_equals_1
PDK1_equals_1
Proliferation_equals_1
PLCG_equals_1
RAF_equals_1
FOS_equals_1
RAS_equals_1

The net has transition(s) that can never fire:
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAK1_equals_1
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAOK_equals_1
AKT_equals_0_to_AKT_equals_1_when_PDK1_equals_1_and_PTEN_equals_0
FGFR3_equals_0_to_FGFR3_equals_1_when_FGFR3_stimulus_equals_1_and_GRB2_equals_0_and_PKC_equals_0
GRB2_equals_0_to_GRB2_equals_1_when_TGFBR_equals_1
GRB2_equals_1_to_GRB2_equals_0_when_EGFR_equals_0_and_FRS2_equals_0_and_TGFBR_equals_0
MYC_equals_0_to_MYC_equals_1_when_AKT_equals_1_and_MSK_equals_1
GAB1_equals_0_to_GAB1_equals_1_when_PI3K_equals_1
EGFR_equals_1_to_EGFR_equals_0_when_EGFR_stimulus_equals_0_and_SPRY_equals_0
JNK_equals_1_to_JNK_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_0_and_MAP3K1_3_equals_1
p38_equals_1_to_p38_equals_0_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_0_and_TAK1_equals_0_and_TAOK_equals_0
p70_equals_0_to_p70_equals_1_when_ERK_equals_1_and_PDK1_equals_1
p70_equals_1_to_p70_equals_0_when_ERK_equals_0
p70_equals_1_to_p70_equals_0_when_PDK1_equals_0
FOS_equals_1_to_FOS_equals_0_when_CREB_equals_0_and_ELK1_equals_0
SMAD_equals_0_to_SMAD_equals_1_when_TGFBR_equals_1
SMAD_equals_1_to_SMAD_equals_0_when_TGFBR_equals_0
MEK1_2_equals_1_to_MEK1_2_equals_0_when_PPP2CA_equals_1
MSK_equals_0_to_MSK_equals_1_when_ERK_equals_1
MAP3K1_3_equals_0_to_MAP3K1_3_equals_1_when_RAS_equals_1
MAP3K1_3_equals_1_to_MAP3K1_3_equals_0_when_RAS_equals_0
MDM2_equals_0_to_MDM2_equals_1_when_AKT_equals_1_and_p14_equals_0
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAK1_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAOK_equals_1
PI3K_equals_1_to_PI3K_equals_0_when_GAB1_equals_0_and_RAS_equals_0
PI3K_equals_1_to_PI3K_equals_0_when_GAB1_equals_0_and_SOS_equals_0
PKC_equals_0_to_PKC_equals_1_when_PLCG_equals_1
PKC_equals_1_to_PKC_equals_0_when_PLCG_equals_0
PLCG_equals_0_to_PLCG_equals_1_when_EGFR_equals_1
GADD45_equals_0_to_GADD45_equals_1_when_SMAD_equals_1
FRS2_equals_0_to_FRS2_equals_1_when_FGFR3_equals_1_and_GRB2_equals_0_and_SPRY_equals_0
FRS2_equals_1_to_FRS2_equals_0_when_FGFR3_equals_0
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_0_and_TAK1_equals_1
ERK_equals_0_to_ERK_equals_1_when_MEK1_2_equals_1
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_MTK1_equals_1
BCL2_equals_1_to_BCL2_equals_0_when_AKT_equals_0
FGFR3_equals_1_to_FGFR3_equals_0_when_GRB2_equals_1
FGFR3_equals_1_to_FGFR3_equals_0_when_PKC_equals_1
FOS_equals_0_to_FOS_equals_1_when_CREB_equals_0_and_ELK1_equals_1_and_ERK_equals_1_and_RSK_equals_1
ELK1_equals_0_to_ELK1_equals_1_when_ERK_equals_1
FGFR3_equals_1_to_FGFR3_equals_0_when_FGFR3_stimulus_equals_0
FOS_equals_1_to_FOS_equals_0_when_ERK_equals_0
FOS_equals_1_to_FOS_equals_0_when_RSK_equals_0
FOS_equals_0_to_FOS_equals_1_when_CREB_equals_1_and_ERK_equals_1_and_RSK_equals_1
PDK1_equals_0_to_PDK1_equals_1_when_PI3K_equals_1
PDK1_equals_1_to_PDK1_equals_0_when_PI3K_equals_0
PI3K_equals_0_to_PI3K_equals_1_when_GAB1_equals_1
PI3K_equals_0_to_PI3K_equals_1_when_RAS_equals_1_and_SOS_equals_1
ERK_equals_1_to_ERK_equals_0_when_MEK1_2_equals_0
BCL2_equals_0_to_BCL2_equals_1_when_AKT_equals_1_and_CREB_equals_1
MEK1_2_equals_1_to_MEK1_2_equals_0_when_AP1_equals_1
GAB1_equals_1_to_GAB1_equals_0_when_GRB2_equals_0_and_PI3K_equals_0
MEK1_2_equals_0_to_MEK1_2_equals_1_when_AP1_equals_0_and_MAP3K1_3_equals_0_and_PPP2CA_equals_0_and_RAF_equals_1
MEK1_2_equals_0_to_MEK1_2_equals_1_when_AP1_equals_0_and_MAP3K1_3_equals_1_and_PPP2CA_equals_0
MEK1_2_equals_1_to_MEK1_2_equals_0_when_MAP3K1_3_equals_0_and_RAF_equals_0
BCL2_equals_1_to_BCL2_equals_0_when_CREB_equals_0
FRS2_equals_1_to_FRS2_equals_0_when_GRB2_equals_1
FRS2_equals_1_to_FRS2_equals_0_when_SPRY_equals_1
GAB1_equals_0_to_GAB1_equals_1_when_GRB2_equals_1
FOXO3_equals_1_to_FOXO3_equals_0_when_AKT_equals_1
Proliferation_equals_1_to_Proliferation_equals_0_when_MYC_equals_0
Proliferation_equals_1_to_Proliferation_equals_0_when_p21_equals_1
Proliferation_equals_1_to_Proliferation_equals_0_when_p70_equals_0
RAF_equals_0_to_RAF_equals_1_when_AKT_equals_0_and_ERK_equals_0_and_PKC_equals_1
RAF_equals_0_to_RAF_equals_1_when_AKT_equals_0_and_ERK_equals_0_and_RAS_equals_1
EGFR_equals_1_to_EGFR_equals_0_when_GRB2_equals_1
EGFR_equals_1_to_EGFR_equals_0_when_PKC_equals_1
EGFR_equals_0_to_EGFR_equals_1_when_EGFR_stimulus_equals_0_and_GRB2_equals_0_and_PKC_equals_0_and_SPRY_equals_1
Apoptosis_equals_1_to_Apoptosis_equals_0_when_ERK_equals_1
RSK_equals_1_to_RSK_equals_0_when_ERK_equals_0
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_1
SOS_equals_0_to_SOS_equals_1_when_GRB2_equals_1_and_RSK_equals_0
SOS_equals_1_to_SOS_equals_0_when_GRB2_equals_0
SOS_equals_1_to_SOS_equals_0_when_RSK_equals_1
SPRY_equals_0_to_SPRY_equals_1_when_ERK_equals_1
RAF_equals_1_to_RAF_equals_0_when_AKT_equals_1
RAF_equals_1_to_RAF_equals_0_when_ERK_equals_1
RAF_equals_1_to_RAF_equals_0_when_PKC_equals_0_and_RAS_equals_0
RAS_equals_0_to_RAS_equals_1_when_PLCG_equals_1
RAS_equals_0_to_RAS_equals_1_when_SOS_equals_1
RAS_equals_1_to_RAS_equals_0_when_PLCG_equals_0_and_SOS_equals_0
RSK_equals_0_to_RSK_equals_1_when_ERK_equals_1
PLCG_equals_0_to_PLCG_equals_1_when_FGFR3_equals_1
PLCG_equals_1_to_PLCG_equals_0_when_EGFR_equals_0_and_FGFR3_equals_0
Proliferation_equals_0_to_Proliferation_equals_1_when_MYC_equals_1_and_p21_equals_0_and_p70_equals_1
GRB2_equals_0_to_GRB2_equals_1_when_EGFR_equals_1
GRB2_equals_0_to_GRB2_equals_1_when_FRS2_equals_1
SPRY_equals_1_to_SPRY_equals_0_when_ERK_equals_0
TAK1_equals_0_to_TAK1_equals_1_when_TGFBR_equals_1
TAK1_equals_1_to_TAK1_equals_0_when_TGFBR_equals_0
TGFBR_equals_0_to_TGFBR_equals_1_when_TGFBR_stimulus_equals_1
TGFBR_equals_1_to_TGFBR_equals_0_when_TGFBR_stimulus_equals_0
p21_equals_1_to_p21_equals_0_when_AKT_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_MAP3K1_3_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_TAK1_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_1
AP1_equals_0_to_AP1_equals_1_when_ATF2_equals_0_and_FOS_equals_1_and_JUN_equals_1
EGFR_equals_0_to_EGFR_equals_1_when_EGFR_stimulus_equals_1_and_GRB2_equals_0_and_PKC_equals_0
ATM_equals_1_to_ATM_equals_0_when_DNA_damage_equals_0
AKT_equals_1_to_AKT_equals_0_when_PDK1_equals_0
AKT_equals_1_to_AKT_equals_0_when_PTEN_equals_1
Apoptosis_equals_1_to_Apoptosis_equals_0_when_BCL2_equals_1

check for constant places
DNA_damage_equals_0
DNA_damage_equals_1
EGFR_stimulus_equals_0
EGFR_stimulus_equals_1
FGFR3_stimulus_equals_0
FGFR3_stimulus_equals_1
TGFBR_stimulus_equals_0
TGFBR_stimulus_equals_1
found 8 constant places
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.000sec


iterations count:3466 (20), effective:182 (1)

initing FirstDep: 0m 0.000sec

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5320"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool marcie"
echo " Input is MAPKbis-PT-5320, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r225-tall-167856407900645"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5320.tgz
mv MAPKbis-PT-5320 execution
cd execution
if [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "UpperBounds" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] || [ "UpperBounds" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "UpperBounds" = "ReachabilityDeadlock" ] || [ "UpperBounds" = "QuasiLiveness" ] || [ "UpperBounds" = "StableMarking" ] || [ "UpperBounds" = "Liveness" ] || [ "UpperBounds" = "OneSafe" ] ; then
echo "FORMULA_NAME UpperBounds"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;