About the Execution of Marcie+red for GPPP-PT-C0100N0000001000
| Execution Summary | |||||
| Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
| 16218.703 | 3600000.00 | 1376634.00 | 1341212.50 | FTTFFTTFTTFFTFTT | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/data/fkordon/mcc2023-input.r170-tall-167838857900863.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool marciexred
Input is GPPP-PT-C0100N0000001000, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r170-tall-167838857900863
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 480K
-rw-r--r-- 1 mcc users 6.5K Feb 26 10:44 CTLCardinality.txt
-rw-r--r-- 1 mcc users 65K Feb 26 10:44 CTLCardinality.xml
-rw-r--r-- 1 mcc users 7.7K Feb 26 10:43 CTLFireability.txt
-rw-r--r-- 1 mcc users 60K Feb 26 10:43 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K Jan 29 11:40 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.6K Feb 25 16:10 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Feb 25 16:10 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.1K Feb 25 16:10 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K Feb 25 16:10 LTLFireability.xml
-rw-r--r-- 1 mcc users 12K Feb 26 10:45 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 120K Feb 26 10:45 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 11K Feb 26 10:44 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 69K Feb 26 10:44 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 16:10 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 16:10 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 17 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 1 Mar 5 18:22 large_marking
-rw-r--r-- 1 mcc users 21K Mar 5 18:22 model.pnml
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-00
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-01
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-02
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-03
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-04
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-05
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-06
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-07
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-08
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-09
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-10
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-11
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-12
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-13
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-14
FORMULA_NAME GPPP-PT-C0100N0000001000-ReachabilityFireability-15
=== Now, execution of the tool begins
BK_START 1678643018744
bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=marciexred
BK_EXAMINATION=ReachabilityFireability
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=GPPP-PT-C0100N0000001000
Applying reductions before tool marcie
Invoking reducer
Running Version 202303021504
[2023-03-12 17:43:40] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityFireability, -timeout, 360, -rebuildPNML]
[2023-03-12 17:43:40] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-12 17:43:40] [INFO ] Load time of PNML (sax parser for PT used): 25 ms
[2023-03-12 17:43:40] [INFO ] Transformed 33 places.
[2023-03-12 17:43:40] [INFO ] Transformed 22 transitions.
[2023-03-12 17:43:40] [INFO ] Parsed PT model containing 33 places and 22 transitions and 83 arcs in 84 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityFireability.xml in 11 ms.
Working with output stream class java.io.PrintStream
Initial state reduction rules removed 6 formulas.
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-05 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-06 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-10 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-11 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-12 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-13 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-15 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Incomplete random walk after 10654 steps, including 3 resets, run finished after 41 ms. (steps per millisecond=259 ) properties (out of 9) seen :8
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-09 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-08 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-07 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-04 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-03 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-02 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-01 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-00 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 40 ms. (steps per millisecond=250 ) properties (out of 1) seen :0
Running SMT prover for 1 properties.
// Phase 1: matrix 22 rows 33 cols
[2023-03-12 17:43:40] [INFO ] Computed 12 place invariants in 6 ms
[2023-03-12 17:43:40] [INFO ] [Real]Absence check using 6 positive place invariants in 6 ms returned sat
[2023-03-12 17:43:40] [INFO ] [Real]Absence check using 6 positive and 6 generalized place invariants in 7 ms returned sat
[2023-03-12 17:43:40] [INFO ] After 150ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:1
[2023-03-12 17:43:40] [INFO ] [Nat]Absence check using 6 positive place invariants in 4 ms returned sat
[2023-03-12 17:43:40] [INFO ] [Nat]Absence check using 6 positive and 6 generalized place invariants in 3 ms returned sat
[2023-03-12 17:43:40] [INFO ] After 78ms SMT Verify possible using all constraints in natural domain returned unsat :1 sat :0
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-14 TRUE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
Fused 1 Parikh solutions to 0 different solutions.
Parikh walk visited 0 properties in 1 ms.
All properties solved without resorting to model-checking.
Total runtime 505 ms.
timeout --kill-after=10s --signal=SIGINT 1m for testing only
Marcie built on Linux at 2019-11-18.
A model checker for Generalized Stochastic Petri nets
authors: Alex Tovchigrechko (IDD package and CTL model checking)
Martin Schwarick (Symbolic numerical analysis and CSL model checking)
Christian Rohr (Simulative and approximative numerical model checking)
marcie@informatik.tu-cottbus.de
called as: /home/mcc/BenchKit/bin//../reducer/bin//../../marcie/bin/marcie --net-file=model.pnml --mcc-file=ReachabilityFireability.xml --memory=6 --mcc-mode
parse successfull
net created successfully
Net: GPPP_PT_C0100N0000001000
(NrP: 33 NrTr: 22 NrArc: 83)
parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec
net check time: 0m 0.000sec
init dd package: 0m 2.736sec
RS generation: 2m55.353sec
-> reachability set: #nodes 713713 (7.1e+05) #states 20,292,531,036,711,574 (16)
starting MCC model checker
--------------------------
checking: EF [IS_FIREABLE [Pyruvate_kinase]]
normalized: E [true U IS_FIREABLE [Pyruvate_kinase]]
MC time: 3m36.104sec
checking: AG [~ [IS_FIREABLE [Enolase]]]
normalized: ~ [E [true U IS_FIREABLE [Enolase]]]
before gc: list nodes free: 1394705
after gc: idd nodes used:1904350, unused:62095650; list nodes free:787733475
MC time: 19m 1.446sec
checking: EF [IS_FIREABLE [Lactate_dehydrogenase]]
normalized: E [true U IS_FIREABLE [Lactate_dehydrogenase]]
MC time: 2m 9.305sec
checking: AG [IS_FIREABLE [remove]]
normalized: ~ [E [true U ~ [IS_FIREABLE [remove]]]]
-> the formula is FALSE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-11 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m11.212sec
checking: AG [IS_FIREABLE [Phosphoglycerate_mutase]]
normalized: ~ [E [true U ~ [IS_FIREABLE [Phosphoglycerate_mutase]]]]
-> the formula is FALSE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-13 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 2m 2.331sec
checking: AG [[IS_FIREABLE [TIM_backward] | ~ [IS_FIREABLE [Pyruvate_kinase]]]]
normalized: ~ [E [true U ~ [[IS_FIREABLE [TIM_backward] | ~ [IS_FIREABLE [Pyruvate_kinase]]]]]]
MC time: 2m40.042sec
checking: EF [[~ [IS_FIREABLE [Phosphoclucose_isomerase]] | IS_FIREABLE [Phosphofructokinase]]]
normalized: E [true U [IS_FIREABLE [Phosphofructokinase] | ~ [IS_FIREABLE [Phosphoclucose_isomerase]]]]
-> the formula is TRUE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-05 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m20.388sec
checking: AG [[~ [[IS_FIREABLE [Phosphoglycerate_kinase] & ~ [[IS_FIREABLE [Glutathione_reductose] | IS_FIREABLE [Aldolase]]]]] | ~ [IS_FIREABLE [Phosphofructokinase]]]]
normalized: ~ [E [true U ~ [[~ [IS_FIREABLE [Phosphofructokinase]] | ~ [[IS_FIREABLE [Phosphoglycerate_kinase] & ~ [[IS_FIREABLE [Glutathione_reductose] | IS_FIREABLE [Aldolase]]]]]]]]]
MC time: 2m 3.920sec
checking: AG [~ [[[~ [[~ [[[IS_FIREABLE [Pyruvate_kinase] | IS_FIREABLE [Transketolase1]] & IS_FIREABLE [Aldolase]]] | IS_FIREABLE [Hexokinase]]] | ~ [IS_FIREABLE [Ru5P_isomerase]]] & IS_FIREABLE [Pyruvate_kinase]]]]
normalized: ~ [E [true U [IS_FIREABLE [Pyruvate_kinase] & [~ [IS_FIREABLE [Ru5P_isomerase]] | ~ [[IS_FIREABLE [Hexokinase] | ~ [[IS_FIREABLE [Aldolase] & [IS_FIREABLE [Pyruvate_kinase] | IS_FIREABLE [Transketolase1]]]]]]]]]]
MC time: 2m35.018sec
checking: EF [[[~ [IS_FIREABLE [Ru5P_isomerase]] | [IS_FIREABLE [Phosphoclucose_isomerase] & ~ [[~ [IS_FIREABLE [TIM_forward]] | IS_FIREABLE [generate]]]]] & [~ [[[~ [[IS_FIREABLE [Ru5P_epimerase] | ~ [[IS_FIREABLE [remove] & IS_FIREABLE [Phosphoglycerate_mutase]]]]] & ~ [IS_FIREABLE [Glutathione_reductose]]] & ~ [IS_FIREABLE [Phosphoclucose_isomerase]]]] & IS_FIREABLE [Ru5P_isomerase]]]]
normalized: E [true U [[IS_FIREABLE [Ru5P_isomerase] & ~ [[~ [IS_FIREABLE [Phosphoclucose_isomerase]] & [~ [IS_FIREABLE [Glutathione_reductose]] & ~ [[IS_FIREABLE [Ru5P_epimerase] | ~ [[IS_FIREABLE [remove] & IS_FIREABLE [Phosphoglycerate_mutase]]]]]]]]] & [[IS_FIREABLE [Phosphoclucose_isomerase] & ~ [[IS_FIREABLE [generate] | ~ [IS_FIREABLE [TIM_forward]]]]] | ~ [IS_FIREABLE [Ru5P_isomerase]]]]]
MC time: 1m45.334sec
checking: AG [~ [[[[[[IS_FIREABLE [Glutathione_reductose] | [IS_FIREABLE [Aldolase] | IS_FIREABLE [Transketolase1]]] & IS_FIREABLE [Phosphoglycerate_kinase]] | IS_FIREABLE [Phosphoclucose_isomerase]] | [IS_FIREABLE [Ru5P_epimerase] | ~ [[IS_FIREABLE [TIM_backward] | ~ [[[IS_FIREABLE [TIM_backward] | IS_FIREABLE [GAP_dehydrogenase]] | [IS_FIREABLE [Glutathione_reductose] | IS_FIREABLE [TIM_backward]]]]]]]] & IS_FIREABLE [generate]]]]
normalized: ~ [E [true U [IS_FIREABLE [generate] & [[IS_FIREABLE [Ru5P_epimerase] | ~ [[IS_FIREABLE [TIM_backward] | ~ [[[IS_FIREABLE [Glutathione_reductose] | IS_FIREABLE [TIM_backward]] | [IS_FIREABLE [TIM_backward] | IS_FIREABLE [GAP_dehydrogenase]]]]]]] | [IS_FIREABLE [Phosphoclucose_isomerase] | [IS_FIREABLE [Phosphoglycerate_kinase] & [IS_FIREABLE [Glutathione_reductose] | [IS_FIREABLE [Aldolase] | IS_FIREABLE [Transketolase1]]]]]]]]]
-> the formula is TRUE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-14 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 1m 3.051sec
checking: AG [~ [[~ [[[[[[IS_FIREABLE [Phosphoglycerate_mutase] & IS_FIREABLE [generate]] | [IS_FIREABLE [Aldolase] | IS_FIREABLE [TIM_backward]]] | [[IS_FIREABLE [Phosphoglycerate_kinase] | IS_FIREABLE [Transaldolase]] | [IS_FIREABLE [GAP_dehydrogenase] & IS_FIREABLE [remove]]]] | ~ [IS_FIREABLE [Glutathione_oxidation]]] | IS_FIREABLE [Ru5P_isomerase]]] & [~ [IS_FIREABLE [remove]] & [[[[[IS_FIREABLE [Aldolase] | IS_FIREABLE [Phosphoclucose_isomerase]] | [IS_FIREABLE [Phosphoclucose_isomerase] | IS_FIREABLE [Ru5P_epimerase]]] | ~ [[IS_FIREABLE [Phosphofructokinase] | IS_FIREABLE [Transaldolase]]]] | IS_FIREABLE [Glutathione_oxidation]] & [[~ [IS_FIREABLE [Ru5P_epimerase]] | ~ [IS_FIREABLE [Enolase]]] & IS_FIREABLE [Ru5P_isomerase]]]]]]]
normalized: ~ [E [true U [[[[IS_FIREABLE [Ru5P_isomerase] & [~ [IS_FIREABLE [Enolase]] | ~ [IS_FIREABLE [Ru5P_epimerase]]]] & [IS_FIREABLE [Glutathione_oxidation] | [~ [[IS_FIREABLE [Phosphofructokinase] | IS_FIREABLE [Transaldolase]]] | [[IS_FIREABLE [Phosphoclucose_isomerase] | IS_FIREABLE [Ru5P_epimerase]] | [IS_FIREABLE [Aldolase] | IS_FIREABLE [Phosphoclucose_isomerase]]]]]] & ~ [IS_FIREABLE [remove]]] & ~ [[IS_FIREABLE [Ru5P_isomerase] | [~ [IS_FIREABLE [Glutathione_oxidation]] | [[[IS_FIREABLE [GAP_dehydrogenase] & IS_FIREABLE [remove]] | [IS_FIREABLE [Phosphoglycerate_kinase] | IS_FIREABLE [Transaldolase]]] | [[IS_FIREABLE [Aldolase] | IS_FIREABLE [TIM_backward]] | [IS_FIREABLE [Phosphoglycerate_mutase] & IS_FIREABLE [generate]]]]]]]]]]
-> the formula is TRUE
FORMULA GPPP-PT-C0100N0000001000-ReachabilityFireability-06 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 3m15.007sec
checking: EF [[~ [[IS_FIREABLE [Glutathione_oxidation] & IS_FIREABLE [Phosphoglycerate_mutase]]] & [~ [[[[[~ [[IS_FIREABLE [Transketolase1] & IS_FIREABLE [Pyruvate_kinase]]] & IS_FIREABLE [Ru5P_epimerase]] | IS_FIREABLE [Pyruvate_kinase]] & [[IS_FIREABLE [Phosphofructokinase] & ~ [[IS_FIREABLE [G6P_dehydrogenase] & IS_FIREABLE [Phosphoglycerate_kinase]]]] | ~ [IS_FIREABLE [TIM_backward]]]] & ~ [IS_FIREABLE [Glutathione_reductose]]]] & [[[[[~ [[IS_FIREABLE [Ru5P_epimerase] | IS_FIREABLE [TIM_backward]]] | IS_FIREABLE [generate]] & IS_FIREABLE [Phosphoglycerate_mutase]] | [~ [IS_FIREABLE [remove]] & IS_FIREABLE [Phosphoclucose_isomerase]]] | ~ [[[IS_FIREABLE [G6P_dehydrogenase] | ~ [IS_FIREABLE [TIM_forward]]] | [~ [IS_FIREABLE [Phosphofructokinase]] | ~ [IS_FIREABLE [Ru5P_isomerase]]]]]] & [[[IS_FIREABLE [Ru5P_isomerase] | [~ [IS_FIREABLE [TIM_backward]] & IS_FIREABLE [GAP_dehydrogenase]]] | [IS_FIREABLE [Transaldolase] | [[~ [IS_FIREABLE [Aldolase]] | ~ [IS_FIREABLE [Ru5P_epimerase]]] & [[IS_FIREABLE [Phosphofructokinase] | IS_FIREABLE [Pyruvate_kinase]] & [IS_FIREABLE [Phosphoclucose_isomerase] | IS_FIREABLE [Aldolase]]]]]] | IS_FIREABLE [Transketolase1]]]]]]
normalized: E [true U [[[[IS_FIREABLE [Transketolase1] | [[IS_FIREABLE [Transaldolase] | [[[IS_FIREABLE [Phosphoclucose_isomerase] | IS_FIREABLE [Aldolase]] & [IS_FIREABLE [Phosphofructokinase] | IS_FIREABLE [Pyruvate_kinase]]] & [~ [IS_FIREABLE [Ru5P_epimerase]] | ~ [IS_FIREABLE [Aldolase]]]]] | [IS_FIREABLE [Ru5P_isomerase] | [IS_FIREABLE [GAP_dehydrogenase] & ~ [IS_FIREABLE [TIM_backward]]]]]] & [~ [[[~ [IS_FIREABLE [Ru5P_isomerase]] | ~ [IS_FIREABLE [Phosphofructokinase]]] | [IS_FIREABLE [G6P_dehydrogenase] | ~ [IS_FIREABLE [TIM_forward]]]]] | [[IS_FIREABLE [Phosphoclucose_isomerase] & ~ [IS_FIREABLE [remove]]] | [IS_FIREABLE [Phosphoglycerate_mutase] & [IS_FIREABLE [generate] | ~ [[IS_FIREABLE [Ru5P_epimerase] | IS_FIREABLE [TIM_backward]]]]]]]] & ~ [[~ [IS_FIREABLE [Glutathione_reductose]] & [[~ [IS_FIREABLE [TIM_backward]] | [IS_FIREABLE [Phosphofructokinase] & ~ [[IS_FIREABLE [G6P_dehydrogenase] & IS_FIREABLE [Phosphoglycerate_kinase]]]]] & [IS_FIREABLE [Pyruvate_kinase] | [IS_FIREABLE [Ru5P_epimerase] & ~ [[IS_FIREABLE [Transketolase1] & IS_FIREABLE [Pyruvate_kinase]]]]]]]]] & ~ [[IS_FIREABLE [Glutathione_oxidation] & IS_FIREABLE [Phosphoglycerate_mutase]]]]]
MC time: 4m29.297sec
checking: AG [[[IS_FIREABLE [Hexokinase] | [[[~ [IS_FIREABLE [Aldolase]] & [[~ [IS_FIREABLE [Phosphoglycerate_kinase]] | ~ [[IS_FIREABLE [Lactate_dehydrogenase] & IS_FIREABLE [Ru5P_isomerase]]]] | [~ [IS_FIREABLE [Hexokinase]] & ~ [IS_FIREABLE [Phosphoglycerate_kinase]]]]] & [IS_FIREABLE [Phosphoglycerate_kinase] | [IS_FIREABLE [Phosphoglycerate_kinase] | [[[IS_FIREABLE [generate] | IS_FIREABLE [TIM_backward]] & [IS_FIREABLE [GAP_dehydrogenase] | IS_FIREABLE [Pyruvate_kinase]]] | [[IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Glutathione_oxidation]] | IS_FIREABLE [Phosphoglycerate_kinase]]]]]] | [[~ [[[~ [IS_FIREABLE [Ru5P_isomerase]] | IS_FIREABLE [Transaldolase]] & ~ [[IS_FIREABLE [Glutathione_oxidation] | IS_FIREABLE [Pyruvate_kinase]]]]] & ~ [[[IS_FIREABLE [Hexokinase] & IS_FIREABLE [Ru5P_epimerase]] & [[IS_FIREABLE [Lactate_dehydrogenase] | IS_FIREABLE [Glutathione_reductose]] & IS_FIREABLE [Phosphofructokinase]]]]] | ~ [IS_FIREABLE [Lactate_dehydrogenase]]]]] & [[IS_FIREABLE [Transaldolase] & [~ [[[[IS_FIREABLE [Phosphofructokinase] | IS_FIREABLE [Hexokinase]] | [IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Transketolase2]]] & ~ [[IS_FIREABLE [GAP_dehydrogenase] | [IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Glutathione_reductose]]]]]] | IS_FIREABLE [Enolase]]] & ~ [IS_FIREABLE [Ru5P_isomerase]]]]]
normalized: ~ [E [true U ~ [[[~ [IS_FIREABLE [Ru5P_isomerase]] & [IS_FIREABLE [Transaldolase] & [IS_FIREABLE [Enolase] | ~ [[~ [[IS_FIREABLE [GAP_dehydrogenase] | [IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Glutathione_reductose]]]] & [[IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Transketolase2]] | [IS_FIREABLE [Phosphofructokinase] | IS_FIREABLE [Hexokinase]]]]]]]] & [IS_FIREABLE [Hexokinase] | [[~ [IS_FIREABLE [Lactate_dehydrogenase]] | [~ [[[IS_FIREABLE [Phosphofructokinase] & [IS_FIREABLE [Lactate_dehydrogenase] | IS_FIREABLE [Glutathione_reductose]]] & [IS_FIREABLE [Hexokinase] & IS_FIREABLE [Ru5P_epimerase]]]] & ~ [[~ [[IS_FIREABLE [Glutathione_oxidation] | IS_FIREABLE [Pyruvate_kinase]]] & [IS_FIREABLE [Transaldolase] | ~ [IS_FIREABLE [Ru5P_isomerase]]]]]]] | [[IS_FIREABLE [Phosphoglycerate_kinase] | [IS_FIREABLE [Phosphoglycerate_kinase] | [[IS_FIREABLE [Phosphoglycerate_kinase] | [IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Glutathione_oxidation]]] | [[IS_FIREABLE [GAP_dehydrogenase] | IS_FIREABLE [Pyruvate_kinase]] & [IS_FIREABLE [generate] | IS_FIREABLE [TIM_backward]]]]]] & [[[~ [IS_FIREABLE [Phosphoglycerate_kinase]] & ~ [IS_FIREABLE [Hexokinase]]] | [~ [[IS_FIREABLE [Lactate_dehydrogenase] & IS_FIREABLE [Ru5P_isomerase]]] | ~ [IS_FIREABLE [Phosphoglycerate_kinase]]]] & ~ [IS_FIREABLE [Aldolase]]]]]]]]]]
before gc: list nodes free: 242164415
after gc: idd nodes used:2150656, unused:61849344; list nodes free:783778260
MC time: 4m30.478sec
checking: EF [~ [[~ [IS_FIREABLE [Ru5P_isomerase]] & [[[[[[IS_FIREABLE [TIM_backward] | [IS_FIREABLE [Phosphofructokinase] & IS_FIREABLE [TIM_forward]]] & [IS_FIREABLE [TIM_backward] | [IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Enolase]]]] | [~ [[IS_FIREABLE [TIM_backward] & IS_FIREABLE [Pyruvate_kinase]]] & [~ [IS_FIREABLE [G6P_dehydrogenase]] & [IS_FIREABLE [Hexokinase] | IS_FIREABLE [Aldolase]]]]] & [[[[IS_FIREABLE [Phosphofructokinase] & IS_FIREABLE [Aldolase]] & [IS_FIREABLE [Aldolase] & IS_FIREABLE [Enolase]]] & ~ [[IS_FIREABLE [Transketolase1] | IS_FIREABLE [Pyruvate_kinase]]]] | [[[IS_FIREABLE [Hexokinase] | IS_FIREABLE [Phosphofructokinase]] & ~ [IS_FIREABLE [remove]]] & ~ [IS_FIREABLE [Transaldolase]]]]] | [~ [[IS_FIREABLE [Aldolase] | [[IS_FIREABLE [Enolase] | IS_FIREABLE [TIM_forward]] | ~ [IS_FIREABLE [Ru5P_isomerase]]]]] | [[[IS_FIREABLE [Transaldolase] | ~ [IS_FIREABLE [generate]]] & [IS_FIREABLE [generate] & ~ [IS_FIREABLE [TIM_backward]]]] & ~ [[IS_FIREABLE [G6P_dehydrogenase] & IS_FIREABLE [Aldolase]]]]]] & ~ [[[~ [[IS_FIREABLE [Transketolase2] & ~ [IS_FIREABLE [generate]]]] & [[~ [IS_FIREABLE [Transketolase1]] | IS_FIREABLE [Ru5P_epimerase]] | [[IS_FIREABLE [Phosphofructokinase] | IS_FIREABLE [TIM_forward]] & [IS_FIREABLE [Glutathione_oxidation] & IS_FIREABLE [Transaldolase]]]]] & ~ [IS_FIREABLE [Hexokinase]]]]]]]]
normalized: E [true U ~ [[[~ [[~ [IS_FIREABLE [Hexokinase]] & [[[[IS_FIREABLE [Glutathione_oxidation] & IS_FIREABLE [Transaldolase]] & [IS_FIREABLE [Phosphofructokinase] | IS_FIREABLE [TIM_forward]]] | [IS_FIREABLE [Ru5P_epimerase] | ~ [IS_FIREABLE [Transketolase1]]]] & ~ [[IS_FIREABLE [Transketolase2] & ~ [IS_FIREABLE [generate]]]]]]] & [[[~ [[IS_FIREABLE [G6P_dehydrogenase] & IS_FIREABLE [Aldolase]]] & [[IS_FIREABLE [generate] & ~ [IS_FIREABLE [TIM_backward]]] & [IS_FIREABLE [Transaldolase] | ~ [IS_FIREABLE [generate]]]]] | ~ [[IS_FIREABLE [Aldolase] | [~ [IS_FIREABLE [Ru5P_isomerase]] | [IS_FIREABLE [Enolase] | IS_FIREABLE [TIM_forward]]]]]] | [[[~ [IS_FIREABLE [Transaldolase]] & [~ [IS_FIREABLE [remove]] & [IS_FIREABLE [Hexokinase] | IS_FIREABLE [Phosphofructokinase]]]] | [~ [[IS_FIREABLE [Transketolase1] | IS_FIREABLE [Pyruvate_kinase]]] & [[IS_FIREABLE [Aldolase] & IS_FIREABLE [Enolase]] & [IS_FIREABLE [Phosphofructokinase] & IS_FIREABLE [Aldolase]]]]] & [[[[IS_FIREABLE [Hexokinase] | IS_FIREABLE [Aldolase]] & ~ [IS_FIREABLE [G6P_dehydrogenase]]] & ~ [[IS_FIREABLE [TIM_backward] & IS_FIREABLE [Pyruvate_kinase]]]] | [[IS_FIREABLE [TIM_backward] | [IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Enolase]]] & [IS_FIREABLE [TIM_backward] | [IS_FIREABLE [Phosphofructokinase] & IS_FIREABLE [TIM_forward]]]]]]]] & ~ [IS_FIREABLE [Ru5P_isomerase]]]]]
MC time: 0m49.361sec
checking: EF [[[[[[~ [[~ [[IS_FIREABLE [Transaldolase] | IS_FIREABLE [TIM_backward]]] & [IS_FIREABLE [Phosphofructokinase] & ~ [IS_FIREABLE [Phosphofructokinase]]]]] & [[[[IS_FIREABLE [Pyruvate_kinase] & IS_FIREABLE [Transketolase2]] | [IS_FIREABLE [G6P_dehydrogenase] & IS_FIREABLE [TIM_backward]]] & IS_FIREABLE [Phosphoclucose_isomerase]] & [~ [IS_FIREABLE [TIM_backward]] | [~ [IS_FIREABLE [Transaldolase]] | [IS_FIREABLE [Glutathione_reductose] & IS_FIREABLE [Phosphofructokinase]]]]]] | [~ [[~ [IS_FIREABLE [Lactate_dehydrogenase]] & [IS_FIREABLE [Glutathione_reductose] | [IS_FIREABLE [Phosphoclucose_isomerase] | IS_FIREABLE [TIM_backward]]]]] & IS_FIREABLE [Aldolase]]] & IS_FIREABLE [Transketolase2]] & ~ [[~ [[~ [[[IS_FIREABLE [TIM_forward] | IS_FIREABLE [G6P_dehydrogenase]] & [IS_FIREABLE [remove] | IS_FIREABLE [TIM_forward]]]] & [IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Glutathione_oxidation]]]] | IS_FIREABLE [Glutathione_oxidation]]]] | [IS_FIREABLE [Transketolase1] | [[~ [IS_FIREABLE [Transketolase1]] & [~ [[[[IS_FIREABLE [Hexokinase] & IS_FIREABLE [Transketolase2]] | [IS_FIREABLE [Glutathione_oxidation] | IS_FIREABLE [Ru5P_epimerase]]] | ~ [IS_FIREABLE [Hexokinase]]]] | ~ [IS_FIREABLE [Pyruvate_kinase]]]] | [[IS_FIREABLE [remove] & ~ [[~ [[IS_FIREABLE [Hexokinase] | IS_FIREABLE [Transketolase1]]] | [~ [IS_FIREABLE [generate]] | [IS_FIREABLE [Pyruvate_kinase] & IS_FIREABLE [Aldolase]]]]]] & [IS_FIREABLE [G6P_dehydrogenase] | [IS_FIREABLE [remove] | [~ [IS_FIREABLE [Enolase]] & [~ [IS_FIREABLE [generate]] | ~ [IS_FIREABLE [Phosphoclucose_isomerase]]]]]]]]]]]
normalized: E [true U [[IS_FIREABLE [Transketolase1] | [[[IS_FIREABLE [G6P_dehydrogenase] | [IS_FIREABLE [remove] | [[~ [IS_FIREABLE [Phosphoclucose_isomerase]] | ~ [IS_FIREABLE [generate]]] & ~ [IS_FIREABLE [Enolase]]]]] & [IS_FIREABLE [remove] & ~ [[[[IS_FIREABLE [Pyruvate_kinase] & IS_FIREABLE [Aldolase]] | ~ [IS_FIREABLE [generate]]] | ~ [[IS_FIREABLE [Hexokinase] | IS_FIREABLE [Transketolase1]]]]]]] | [[~ [IS_FIREABLE [Pyruvate_kinase]] | ~ [[~ [IS_FIREABLE [Hexokinase]] | [[IS_FIREABLE [Glutathione_oxidation] | IS_FIREABLE [Ru5P_epimerase]] | [IS_FIREABLE [Hexokinase] & IS_FIREABLE [Transketolase2]]]]]] & ~ [IS_FIREABLE [Transketolase1]]]]] | [~ [[IS_FIREABLE [Glutathione_oxidation] | ~ [[[IS_FIREABLE [Phosphoglycerate_kinase] & IS_FIREABLE [Glutathione_oxidation]] & ~ [[[IS_FIREABLE [remove] | IS_FIREABLE [TIM_forward]] & [IS_FIREABLE [TIM_forward] | IS_FIREABLE [G6P_dehydrogenase]]]]]]]] & [IS_FIREABLE [Transketolase2] & [[IS_FIREABLE [Aldolase] & ~ [[[IS_FIREABLE [Glutathione_reductose] | [IS_FIREABLE [Phosphoclucose_isomerase] | IS_FIREABLE [TIM_backward]]] & ~ [IS_FIREABLE [Lactate_dehydrogenase]]]]] | [[[[[IS_FIREABLE [Glutathione_reductose] & IS_FIREABLE [Phosphofructokinase]] | ~ [IS_FIREABLE [Transaldolase]]] | ~ [IS_FIREABLE [TIM_backward]]] & [IS_FIREABLE [Phosphoclucose_isomerase] & [[IS_FIREABLE [G6P_dehydrogenase] & IS_FIREABLE [TIM_backward]] | [IS_FIREABLE [Pyruvate_kinase] & IS_FIREABLE [Transketolase2]]]]] & ~ [[[IS_FIREABLE [Phosphofructokinase] & ~ [IS_FIREABLE [Phosphofructokinase]]] & ~ [[IS_FIREABLE [Transaldolase] | IS_FIREABLE [TIM_backward]]]]]]]]]]]
TIME LIMIT: Killed by timeout after 3600 seconds
MemTotal: 16393216 kB
MemFree: 159660 kB
After kill :
MemTotal: 16393216 kB
MemFree: 16258944 kB
BK_TIME_CONFINEMENT_REACHED
--------------------
content from stderr:
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityFireability -timeout 360 -rebuildPNML
check for maximal unmarked siphon
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok
initing FirstDep: 0m 0.000sec
iterations count:11921 (541), effective:2875 (130)
initing FirstDep: 0m 0.000sec
sat_reach.icc:155: Timeout: after 213 sec
sat_reach.icc:155: Timeout: after 200 sec
sat_reach.icc:155: Timeout: after 128 sec
iterations count:22 (1), effective:0 (0)
iterations count:32 (1), effective:10 (0)
sat_reach.icc:155: Timeout: after 128 sec
iterations count:65 (2), effective:8 (0)
sat_reach.icc:155: Timeout: after 124 sec
sat_reach.icc:155: Timeout: after 115 sec
sat_reach.icc:155: Timeout: after 103 sec
sat_reach.icc:155: Timeout: after 88 sec
sat_reach.icc:155: Timeout: after 64 sec
sat_reach.icc:155: Timeout: after 39 sec
sat_reach.icc:155: Timeout: after 35 sec
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000001000"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="marciexred"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool marciexred"
echo " Input is GPPP-PT-C0100N0000001000, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r170-tall-167838857900863"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000001000.tgz
mv GPPP-PT-C0100N0000001000 execution
cd execution
if [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "UpperBounds" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] || [ "ReachabilityFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;