Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r485-tall-167912700501287.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is ViralEpidemic-PT-S03D1C1A08, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r485-tall-167912700501287
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 29M
-rw-r--r-- 1 mcc users 8.4K Feb 25 22:29 CTLCardinality.txt
-rw-r--r-- 1 mcc users 71K Feb 25 22:29 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.5K Feb 25 21:03 CTLFireability.txt
-rw-r--r-- 1 mcc users 49K Feb 25 21:03 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:41 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.8K Jan 29 11:41 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.5K Feb 25 17:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Feb 25 17:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K Feb 25 17:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K Feb 25 17:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 18K Feb 26 01:36 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 148K Feb 26 01:36 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 7.0K Feb 25 23:57 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 42K Feb 25 23:57 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.0K Feb 25 17:26 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K Feb 25 17:26 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 equiv_col
-rw-r--r-- 1 mcc users 11 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 29M Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-00
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-01
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-02
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-03
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-04
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-05
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-06
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-07
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-08
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-09
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-10
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-11
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-12
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-13
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-14
FORMULA_NAME ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1679337271930

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityFireability
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=ViralEpidemic-PT-S03D1C1A08
Not applying reductions.
Model is PT
ReachabilityFireability PT
Running Version 202303021504
[2023-03-20 18:34:33] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityFireability, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-20 18:34:33] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-20 18:34:34] [INFO ] Load time of PNML (sax parser for PT used): 1307 ms
[2023-03-20 18:34:34] [INFO ] Transformed 49206 places.
[2023-03-20 18:34:35] [INFO ] Transformed 68887 transitions.
[2023-03-20 18:34:35] [INFO ] Parsed PT model containing 49206 places and 68887 transitions and 157456 arcs in 1634 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityFireability.xml in 24 ms.
Working with output stream class java.io.PrintStream
[2023-03-20 18:34:38] [INFO ] Flatten gal took : 2397 ms
Incomplete random walk after 10000 steps, including 72 resets, run finished after 4094 ms. (steps per millisecond=2 ) properties (out of 16) seen :6
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-11 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-10 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-09 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-07 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-03 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-01 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
[2023-03-20 18:34:40] [INFO ] Flatten gal took : 1683 ms
[2023-03-20 18:34:40] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality10870444594758770902.gal : 326 ms
[2023-03-20 18:34:40] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality14297829813774693348.prop : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality10870444594758770902.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality14297829813774693348.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...330
Incomplete Best-First random walk after 10001 steps, including 3 resets, run finished after 2656 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Incomplete Best-First random walk after 10001 steps, including 3 resets, run finished after 2711 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 2686 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Incomplete Best-First random walk after 10001 steps, including 3 resets, run finished after 2645 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 2692 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 2697 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Incomplete Best-First random walk after 10001 steps, including 3 resets, run finished after 2681 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Incomplete Best-First random walk after 10001 steps, including 3 resets, run finished after 2702 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 2734 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 2751 ms. (steps per millisecond=3 ) properties (out of 10) seen :0
Running SMT prover for 10 properties.
// Phase 1: matrix 68887 rows 49206 cols
[2023-03-20 18:35:35] [INFO ] Invariants computation overflowed in 28611 ms
java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Failed to assert expression: java.io.IOException: Stream close...
at fr.lip6.move.gal.structural.smt.SMTUtils.execAndCheckResult(SMTUtils.java:251)
at fr.lip6.move.gal.structural.smt.DeadlockTester.verifyPossible(DeadlockTester.java:629)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMTIncremental(DeadlockTester.java:339)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMT(DeadlockTester.java:223)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.applyReductions(ReachabilitySolver.java:95)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:902)
at fr.lip6.move.gal.application.Application.start(Application.java:178)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:45)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:402)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:568)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2023-03-20 18:36:00] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
[2023-03-20 18:36:00] [INFO ] After 25055ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0
Fused 10 Parikh solutions to 1 different solutions.
Parikh walk visited 0 properties in 0 ms.
Support contains 164 out of 49206 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 49206/49206 places, 68887/68887 transitions.
Graph (complete) has 29523 edges and 49206 vertex of which 760 are kept as prefixes of interest. Removing 48446 places using SCC suffix rule.45 ms
Discarding 48446 places :
Also discarding 67242 output transitions
Drop transitions removed 67242 transitions
Drop transitions removed 930 transitions
Reduce isomorphic transitions removed 930 transitions.
Drop transitions removed 134 transitions
Trivial Post-agglo rules discarded 134 transitions
Performed 134 trivial Post agglomeration. Transition count delta: 134
Iterating post reduction 0 with 1064 rules applied. Total rules applied 1065 place count 760 transition count 581
Reduce places removed 134 places and 0 transitions.
Iterating post reduction 1 with 134 rules applied. Total rules applied 1199 place count 626 transition count 581
Performed 76 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 2 with 76 Pre rules applied. Total rules applied 1199 place count 626 transition count 505
Deduced a syphon composed of 76 places in 0 ms
Reduce places removed 76 places and 0 transitions.
Iterating global reduction 2 with 152 rules applied. Total rules applied 1351 place count 550 transition count 505
Discarding 81 places :
Symmetric choice reduction at 2 with 81 rule applications. Total rules 1432 place count 469 transition count 424
Iterating global reduction 2 with 81 rules applied. Total rules applied 1513 place count 469 transition count 424
Performed 57 Post agglomeration using F-continuation condition.Transition count delta: 57
Deduced a syphon composed of 57 places in 0 ms
Reduce places removed 57 places and 0 transitions.
Iterating global reduction 2 with 114 rules applied. Total rules applied 1627 place count 412 transition count 367
Free-agglomeration rule applied 1 times.
Iterating global reduction 2 with 1 rules applied. Total rules applied 1628 place count 412 transition count 366
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 2 with 1 rules applied. Total rules applied 1629 place count 411 transition count 366
Reduce places removed 1 places and 1 transitions.
Iterating global reduction 3 with 1 rules applied. Total rules applied 1630 place count 410 transition count 365
Applied a total of 1630 rules in 433 ms. Remains 410 /49206 variables (removed 48796) and now considering 365/68887 (removed 68522) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 433 ms. Remains : 410/49206 places, 365/68887 transitions.
Incomplete random walk after 10000 steps, including 45 resets, run finished after 162 ms. (steps per millisecond=61 ) properties (out of 10) seen :9
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-15 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-14 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-13 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-12 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-08 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-06 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-05 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-04 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-00 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Finished Best-First random walk after 9654 steps, including 2 resets, run visited all 1 properties in 55 ms. (steps per millisecond=175 )
FORMULA ViralEpidemic-PT-S03D1C1A08-ReachabilityFireability-02 FALSE TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
ITS runner failed with exception null
java.lang.InterruptedException
at java.base/java.lang.Object.wait(Native Method)
at java.base/java.lang.Thread.join(Thread.java:1304)
at java.base/java.lang.Thread.join(Thread.java:1372)
at fr.lip6.move.gal.application.runner.AbstractRunner.join(AbstractRunner.java:27)
at fr.lip6.move.gal.application.runner.its.ITSRunner.join(ITSRunner.java:177)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.verifyWithSDD(GlobalPropertySolver.java:675)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.lambda$2(ReachabilitySolver.java:63)
at java.base/java.lang.Thread.run(Thread.java:833)
All properties solved without resorting to model-checking.
Total runtime 87596 ms.

BK_STOP 1679337362080

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityFireability = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S03D1C1A08"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is ViralEpidemic-PT-S03D1C1A08, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r485-tall-167912700501287"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S03D1C1A08.tgz
mv ViralEpidemic-PT-S03D1C1A08 execution
cd execution
if [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "UpperBounds" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] || [ "ReachabilityFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;