Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r485-tall-167912700501254.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is ViralEpidemic-PT-S02D1C1A12, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r485-tall-167912700501254
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 20M
-rw-r--r-- 1 mcc users 11K Feb 25 22:07 CTLCardinality.txt
-rw-r--r-- 1 mcc users 92K Feb 25 22:07 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.7K Feb 25 20:51 CTLFireability.txt
-rw-r--r-- 1 mcc users 47K Feb 25 20:51 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:41 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.8K Jan 29 11:41 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 5.6K Feb 25 17:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 31K Feb 25 17:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.1K Feb 25 17:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Feb 25 17:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 21K Feb 25 23:53 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 161K Feb 25 23:53 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 9.5K Feb 25 22:42 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 57K Feb 25 22:42 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.0K Feb 25 17:26 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.1K Feb 25 17:26 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 equiv_col
-rw-r--r-- 1 mcc users 11 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 19M Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-00
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-01
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-02
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-03
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-04
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-05
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-06
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-07
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-08
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-09
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-10
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-11
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-12
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-13
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-14
FORMULA_NAME ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-15

=== Now, execution of the tool begins

BK_START 1679332758101

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=ViralEpidemic-PT-S02D1C1A12
Not applying reductions.
Model is PT
ReachabilityCardinality PT
Running Version 202303021504
[2023-03-20 17:19:19] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-20 17:19:19] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-20 17:19:20] [INFO ] Load time of PNML (sax parser for PT used): 909 ms
[2023-03-20 17:19:20] [INFO ] Transformed 32765 places.
[2023-03-20 17:19:20] [INFO ] Transformed 40955 transitions.
[2023-03-20 17:19:20] [INFO ] Parsed PT model containing 32765 places and 40955 transitions and 90101 arcs in 1156 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityCardinality.xml in 78 ms.
Working with output stream class java.io.PrintStream
[2023-03-20 17:19:23] [INFO ] Flatten gal took : 1712 ms
[2023-03-20 17:19:24] [INFO ] Flatten gal took : 1076 ms
Incomplete random walk after 10000 steps, including 932 resets, run finished after 3365 ms. (steps per millisecond=2 ) properties (out of 16) seen :2
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-10 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-01 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
[2023-03-20 17:19:25] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality1863296835306953852.gal : 313 ms
[2023-03-20 17:19:25] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality15289296791673237025.prop : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality1863296835306953852.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality15289296791673237025.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Incomplete Best-First random walk after 10001 steps, including 148 resets, run finished after 2296 ms. (steps per millisecond=4 ) properties (out of 14) seen :1
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-02 FALSE TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
Incomplete Best-First random walk after 10001 steps, including 130 resets, run finished after 2209 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10001 steps, including 124 resets, run finished after 2186 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10001 steps, including 150 resets, run finished after 2233 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10001 steps, including 159 resets, run finished after 2142 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10001 steps, including 142 resets, run finished after 2175 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10001 steps, including 117 resets, run finished after 2251 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10001 steps, including 124 resets, run finished after 2175 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10001 steps, including 135 resets, run finished after 2731 ms. (steps per millisecond=3 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10000 steps, including 134 resets, run finished after 2591 ms. (steps per millisecond=3 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10001 steps, including 145 resets, run finished after 2251 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10000 steps, including 126 resets, run finished after 2125 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Incomplete Best-First random walk after 10000 steps, including 140 resets, run finished after 2202 ms. (steps per millisecond=4 ) properties (out of 13) seen :0
Running SMT prover for 13 properties.
// Phase 1: matrix 40955 rows 32765 cols
[2023-03-20 17:20:03] [INFO ] Invariants computation overflowed in 9143 ms
[2023-03-20 17:20:13] [INFO ] After 9771ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:13
Loading property file /tmp/ReachabilityCardinality15289296791673237025.prop.
[2023-03-20 17:20:38] [INFO ] After 11177ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :12
[2023-03-20 17:20:38] [INFO ] After 11231ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :12
Attempting to minimize the solution found.
Minimization took 12 ms.
[2023-03-20 17:20:38] [INFO ] After 25083ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :12
Fused 13 Parikh solutions to 1 different solutions.
Parikh walk visited 0 properties in 0 ms.
Support contains 365 out of 32765 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 32765/32765 places, 40955/40955 transitions.
Graph (complete) has 16382 edges and 32765 vertex of which 2454 are kept as prefixes of interest. Removing 30311 places using SCC suffix rule.43 ms
Discarding 30311 places :
Also discarding 35179 output transitions
Drop transitions removed 35179 transitions
Drop transitions removed 3552 transitions
Reduce isomorphic transitions removed 3552 transitions.
Drop transitions removed 596 transitions
Trivial Post-agglo rules discarded 596 transitions
Performed 596 trivial Post agglomeration. Transition count delta: 596
Iterating post reduction 0 with 4148 rules applied. Total rules applied 4149 place count 2454 transition count 1628
Reduce places removed 596 places and 0 transitions.
Performed 4 Post agglomeration using F-continuation condition.Transition count delta: 4
Iterating post reduction 1 with 600 rules applied. Total rules applied 4749 place count 1858 transition count 1624
Reduce places removed 4 places and 0 transitions.
Iterating post reduction 2 with 4 rules applied. Total rules applied 4753 place count 1854 transition count 1624
Performed 154 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 3 with 154 Pre rules applied. Total rules applied 4753 place count 1854 transition count 1470
Deduced a syphon composed of 154 places in 1 ms
Reduce places removed 154 places and 0 transitions.
Iterating global reduction 3 with 308 rules applied. Total rules applied 5061 place count 1700 transition count 1470
Discarding 328 places :
Symmetric choice reduction at 3 with 328 rule applications. Total rules 5389 place count 1372 transition count 1138
Iterating global reduction 3 with 328 rules applied. Total rules applied 5717 place count 1372 transition count 1138
Performed 442 Post agglomeration using F-continuation condition.Transition count delta: 442
Deduced a syphon composed of 442 places in 0 ms
Reduce places removed 442 places and 0 transitions.
Iterating global reduction 3 with 884 rules applied. Total rules applied 6601 place count 930 transition count 696
Renaming transitions due to excessive name length > 1024 char.
Free-agglomeration rule applied 2 times.
Iterating global reduction 3 with 2 rules applied. Total rules applied 6603 place count 930 transition count 694
Reduce places removed 2 places and 0 transitions.
Iterating post reduction 3 with 2 rules applied. Total rules applied 6605 place count 928 transition count 694
Applied a total of 6605 rules in 724 ms. Remains 928 /32765 variables (removed 31837) and now considering 694/40955 (removed 40261) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 725 ms. Remains : 928/32765 places, 694/40955 transitions.
Incomplete random walk after 10000 steps, including 27 resets, run finished after 300 ms. (steps per millisecond=33 ) properties (out of 13) seen :12
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-15 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-14 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-13 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-12 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-11 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-09 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-08 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-06 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-05 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-04 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-03 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-00 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 77 ms. (steps per millisecond=129 ) properties (out of 1) seen :0
Running SMT prover for 1 properties.
// Phase 1: matrix 694 rows 928 cols
[2023-03-20 17:20:39] [INFO ] Computed 235 place invariants in 34 ms
[2023-03-20 17:20:39] [INFO ] After 97ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:1
[2023-03-20 17:20:39] [INFO ] [Nat]Absence check using 0 positive and 235 generalized place invariants in 55 ms returned sat
[2023-03-20 17:20:40] [INFO ] After 429ms SMT Verify possible using all constraints in natural domain returned unsat :1 sat :0
FORMULA ViralEpidemic-PT-S02D1C1A12-ReachabilityCardinality-07 TRUE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
Fused 1 Parikh solutions to 0 different solutions.
Parikh walk visited 0 properties in 0 ms.
ITS runner failed with exception null
java.lang.InterruptedException
at java.base/java.lang.Object.wait(Native Method)
at java.base/java.lang.Thread.join(Thread.java:1304)
at java.base/java.lang.Thread.join(Thread.java:1372)
at fr.lip6.move.gal.application.runner.AbstractRunner.join(AbstractRunner.java:27)
at fr.lip6.move.gal.application.runner.its.ITSRunner.join(ITSRunner.java:177)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.verifyWithSDD(GlobalPropertySolver.java:675)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.lambda$2(ReachabilitySolver.java:63)
at java.base/java.lang.Thread.run(Thread.java:833)
All properties solved without resorting to model-checking.
Total runtime 80264 ms.

BK_STOP 1679332842965

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ perl -pe 's/.*\.//g'
++ sed s/.jar//
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="ViralEpidemic-PT-S02D1C1A12"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is ViralEpidemic-PT-S02D1C1A12, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r485-tall-167912700501254"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/ViralEpidemic-PT-S02D1C1A12.tgz
mv ViralEpidemic-PT-S02D1C1A12 execution
cd execution
if [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "UpperBounds" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] || [ "ReachabilityCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;