Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r467-smll-167912657500333.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is StigmergyCommit-PT-10b, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r467-smll-167912657500333
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 416M
-rw-r--r-- 1 mcc users 8.0K Feb 26 11:25 CTLCardinality.txt
-rw-r--r-- 1 mcc users 87K Feb 26 11:25 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.8K Feb 26 11:18 CTLFireability.txt
-rw-r--r-- 1 mcc users 60K Feb 26 11:18 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K Feb 25 17:13 LTLCardinality.txt
-rw-r--r-- 1 mcc users 22K Feb 25 17:13 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K Feb 25 17:13 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 25 17:13 LTLFireability.xml
-rw-r--r-- 1 mcc users 9.3K Feb 26 11:52 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 90K Feb 26 11:52 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 9.8K Feb 26 11:36 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 81K Feb 26 11:36 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 17:13 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 17:13 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 equiv_col
-rw-r--r-- 1 mcc users 4 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 416M Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1680360691534

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StableMarking
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=StigmergyCommit-PT-10b
Not applying reductions.
Model is PT
StableMarking PT
Running Version 202303301559
[2023-04-01 14:51:34] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2023-04-01 14:51:34] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-04-01 14:51:51] [INFO ] Load time of PNML (sax parser for PT used): 16771 ms
[2023-04-01 14:51:51] [INFO ] Transformed 3352 places.
[2023-04-01 14:51:53] [INFO ] Transformed 359880 transitions.
[2023-04-01 14:51:53] [INFO ] Found NUPN structural information;
[2023-04-01 14:51:53] [INFO ] Parsed PT model containing 3352 places and 359880 transitions and 7847007 arcs in 18913 ms.
Graph (trivial) has 3329 edges and 3352 vertex of which 231 / 3352 are part of one of the 33 SCC in 61 ms
Free SCC test removed 198 places
Structural test allowed to assert that 1477 places are NOT stable. Took 1688 ms.
Ensure Unique test removed 220 transitions
Reduce redundant transitions removed 220 transitions.
Incomplete random walk after 10000 steps, including 50 resets, run finished after 8006 ms. (steps per millisecond=1 ) properties (out of 1875) seen :0
Interrupted probabilistic random walk after 9056 steps, run timeout after 24015 ms. (steps per millisecond=0 ) properties seen :{0=1, 1=1, 7=1, 8=1, 9=1, 11=1, 12=1, 13=1, 170=1, 171=1, 177=1, 178=1, 179=1, 181=1, 182=1, 183=1, 340=1, 341=1, 347=1, 348=1, 349=1, 351=1, 352=1, 353=1, 510=1, 511=1, 517=1, 518=1, 519=1, 521=1, 522=1, 523=1, 680=1, 681=1, 687=1, 688=1, 689=1, 691=1, 692=1, 693=1, 850=1, 851=1, 857=1, 858=1, 859=1, 861=1, 862=1, 863=1, 1020=1, 1021=1, 1027=1, 1028=1, 1029=1, 1031=1, 1032=1, 1033=1, 1190=1, 1191=1, 1197=1, 1198=1, 1199=1, 1201=1, 1202=1, 1203=1, 1360=1, 1361=1, 1367=1, 1368=1, 1369=1, 1371=1, 1372=1, 1373=1, 1530=1, 1531=1, 1537=1, 1538=1, 1539=1, 1541=1, 1542=1, 1543=1, 1700=1, 1701=1, 1707=1, 1708=1, 1709=1, 1711=1, 1712=1, 1713=1, 1870=1}
Probabilistic random walk after 9056 steps, saw 6220 distinct states, run finished after 24017 ms. (steps per millisecond=0 ) properties seen :89
Running SMT prover for 1786 properties.
[2023-04-01 14:52:33] [INFO ] Flow matrix only has 359628 transitions (discarded 32 similar events)
// Phase 1: matrix 359628 rows 3154 cols
[2023-04-01 14:52:59] [INFO ] Flatten gal took : 52130 ms
[2023-04-01 14:53:03] [INFO ] Computed 12 invariants in 29750 ms
java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Failed to assert expression: java.io.IOException: Stream close...
at fr.lip6.move.gal.structural.smt.SMTUtils.execAndCheckResult(SMTUtils.java:251)
at fr.lip6.move.gal.structural.smt.DeadlockTester.assertInvariants(DeadlockTester.java:2343)
at fr.lip6.move.gal.structural.smt.DeadlockTester.verifyPossible(DeadlockTester.java:621)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMTIncremental(DeadlockTester.java:342)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMT(DeadlockTester.java:226)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.applyReductions(ReachabilitySolver.java:96)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.applyReachabilitySolver(GlobalPropertySolver.java:724)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.solveProperty(GlobalPropertySolver.java:558)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.preSolveLiveness(GlobalPropertySolver.java:412)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.preStableMarking(GlobalPropertySolver.java:321)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.solveProperty(GlobalPropertySolver.java:294)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:426)
at fr.lip6.move.gal.application.Application.start(Application.java:182)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:45)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:402)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:568)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2023-04-01 14:53:28] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
[2023-04-01 14:53:28] [INFO ] After 25085ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0
Fused 1786 Parikh solutions to 1 different solutions.
Parikh walk visited 0 properties in 2 ms.
Support contains 1786 out of 3154 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 3154/3154 places, 359660/359660 transitions.
Drop transitions removed 33 transitions
Reduce isomorphic transitions removed 33 transitions.
Drop transitions removed 1143 transitions
Trivial Post-agglo rules discarded 1143 transitions
Performed 1143 trivial Post agglomeration. Transition count delta: 1143
Iterating post reduction 0 with 1176 rules applied. Total rules applied 1176 place count 3154 transition count 358484
Reduce places removed 1143 places and 0 transitions.
Iterating post reduction 1 with 1143 rules applied. Total rules applied 2319 place count 2011 transition count 358484
Performed 22 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 2 with 22 Pre rules applied. Total rules applied 2319 place count 2011 transition count 358462
Deduced a syphon composed of 22 places in 807 ms
Reduce places removed 22 places and 0 transitions.
Iterating global reduction 2 with 44 rules applied. Total rules applied 2363 place count 1989 transition count 358462
[2023-04-01 14:53:49] [INFO ] Flatten gal took : 50655 ms
Discarding 1 places :
Symmetric choice reduction at 2 with 1 rule applications. Total rules 2364 place count 1988 transition count 358461
[2023-04-01 14:53:58] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality15109449720370518948.gal : 8062 ms
[2023-04-01 14:53:58] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality12150965623313678899.prop : 20 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303301559/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality15109449720370518948.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality12150965623313678899.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303301559/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...330
Iterating global reduction 2 with 1 rules applied. Total rules applied 2365 place count 1988 transition count 358461
Performed 23 Post agglomeration using F-continuation condition.Transition count delta: 23
Deduced a syphon composed of 23 places in 1187 ms
Reduce places removed 23 places and 0 transitions.
Iterating global reduction 2 with 46 rules applied. Total rules applied 2411 place count 1965 transition count 358438

BK_STOP 1680360903113

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StableMarking = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303301559.jar
+ VERSION=202303301559
+ echo 'Running Version 202303301559'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="StigmergyCommit-PT-10b"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is StigmergyCommit-PT-10b, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r467-smll-167912657500333"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/StigmergyCommit-PT-10b.tgz
mv StigmergyCommit-PT-10b execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StableMarking.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;