Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r357-smll-167891806000232.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is SafeBus-COL-15, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r357-smll-167891806000232
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 500K
-rw-r--r-- 1 mcc users 5.9K Feb 26 02:12 CTLCardinality.txt
-rw-r--r-- 1 mcc users 57K Feb 26 02:12 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.1K Feb 26 02:07 CTLFireability.txt
-rw-r--r-- 1 mcc users 54K Feb 26 02:07 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:41 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.5K Feb 25 16:49 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K Feb 25 16:49 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K Feb 25 16:49 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Feb 25 16:49 LTLFireability.xml
-rw-r--r-- 1 mcc users 16K Feb 26 02:44 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 168K Feb 26 02:44 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 6.9K Feb 26 02:39 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 52K Feb 26 02:39 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Feb 25 16:49 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K Feb 25 16:49 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Mar 5 18:23 equiv_pt
-rw-r--r-- 1 mcc users 3 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 5 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 42K Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1679044886872

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=SafeBus-COL-15
Not applying reductions.
Model is COL
StateSpace COL
Running Version 202303021504
[2023-03-17 09:21:30] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-17 09:21:30] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-17 09:21:30] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[2023-03-17 09:21:30] [WARNING] Using fallBack plugin, rng conformance not checked
[2023-03-17 09:21:31] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 874 ms
[2023-03-17 09:21:31] [INFO ] Detected 1 constant HL places corresponding to 15 PT places.
[2023-03-17 09:21:31] [INFO ] Imported 20 HL places and 14 HL transitions for a total of 636 PT places and 59206.0 transition bindings in 32 ms.
[2023-03-17 09:21:31] [INFO ] Unfolded HLPN to a Petri net with 636 places and 4801 transitions 34264 arcs in 191 ms.
[2023-03-17 09:21:31] [INFO ] Unfolded 0 HLPN properties in 0 ms.
Deduced a syphon composed of 15 places in 20 ms
Reduce places removed 30 places and 30 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 606/606 places, 4771/4771 transitions.
[2023-03-17 09:21:34] [INFO ] Redundant transitions in 777 ms returned []
[2023-03-17 09:21:34] [INFO ] Flow matrix only has 1412 transitions (discarded 3359 similar events)
// Phase 1: matrix 1412 rows 606 cols
[2023-03-17 09:21:34] [INFO ] Computed 65 place invariants in 153 ms
[2023-03-17 09:21:40] [INFO ] Dead Transitions using invariants and state equation in 6658 ms found 225 transitions.
Found 225 dead transitions using SMT.
Drop transitions removed 225 transitions
Dead transitions reduction (with SMT) removed 225 transitions
Starting structural reductions in STATESPACE mode, iteration 1 : 606/606 places, 4546/4771 transitions.
[2023-03-17 09:21:42] [INFO ] Redundant transitions in 375 ms returned []
Finished structural reductions in STATESPACE mode , in 2 iterations and 10938 ms. Remains : 606/606 places, 4546/4771 transitions.
Final net has 606 places and 4546 transitions.
[2023-03-17 09:21:43] [INFO ] Flatten gal took : 573 ms
[2023-03-17 09:21:43] [INFO ] Applying decomposition
[2023-03-17 09:21:43] [INFO ] Flatten gal took : 325 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph3831207246415647373.txt' '-o' '/tmp/graph3831207246415647373.bin' '-w' '/tmp/graph3831207246415647373.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph3831207246415647373.bin' '-l' '-1' '-v' '-w' '/tmp/graph3831207246415647373.weights' '-q' '0' '-e' '0.001'
[2023-03-17 09:21:44] [INFO ] Decomposing Gal with order
[2023-03-17 09:21:44] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-17 09:21:46] [INFO ] Removed a total of 11604 redundant transitions.
[2023-03-17 09:21:46] [INFO ] Flatten gal took : 1482 ms
[2023-03-17 09:21:47] [INFO ] Fuse similar labels procedure discarded/fused a total of 1067 labels/synchronizations in 225 ms.
[2023-03-17 09:21:47] [INFO ] Time to serialize gal into /tmp/StateSpace14707994494054383371.gal : 39 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace14707994494054383371.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...220
Detected timeout of ITS tools.
[2023-03-17 09:41:55] [INFO ] Applying decomposition
[2023-03-17 09:41:57] [INFO ] Flatten gal took : 1753 ms
[2023-03-17 09:41:58] [INFO ] Decomposing Gal with order
[2023-03-17 09:41:58] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-17 09:41:59] [INFO ] Removed a total of 21936 redundant transitions.
[2023-03-17 09:41:59] [INFO ] Flatten gal took : 814 ms
[2023-03-17 09:42:00] [INFO ] Fuse similar labels procedure discarded/fused a total of 120 labels/synchronizations in 132 ms.
[2023-03-17 09:42:00] [INFO ] Time to serialize gal into /tmp/StateSpace9567331813289731510.gal : 71 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace9567331813289731510.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Detected timeout of ITS tools.
[2023-03-17 10:02:15] [INFO ] Flatten gal took : 1974 ms
[2023-03-17 10:02:17] [INFO ] Input system was already deterministic with 4546 transitions.
[2023-03-17 10:02:17] [INFO ] Transformed 606 places.
[2023-03-17 10:02:17] [INFO ] Transformed 4546 transitions.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/pinvar' '/home/mcc/execution/gspn'
P-invariant computation with GreatSPN timed out. Skipping.
Running greatSPN : cd /home/mcc/execution;'/home/mcc/BenchKit/bin//../itstools/bin//..//greatspn//bin/RGMEDD2' '/home/mcc/execution/gspn' '-META' '-varord-only'
Run of greatSPN captured in /home/mcc/execution/outPut.txt
Using order generated by GreatSPN with heuristic : META
[2023-03-17 10:02:48] [INFO ] Time to serialize gal into /tmp/StateSpace4471224412915211566.gal : 31 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace4471224412915211566.gal' '-t' 'CGAL' '--stats' '--load-order' '/home/mcc/execution/model.ord' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...285
Successfully loaded order from file /home/mcc/execution/model.ord
TIME LIMIT: Killed by timeout after 3600 seconds
MemTotal: 16393216 kB
MemFree: 156520 kB
After kill :
MemTotal: 16393216 kB
MemFree: 13351800 kB

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="SafeBus-COL-15"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is SafeBus-COL-15, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r357-smll-167891806000232"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/SafeBus-COL-15.tgz
mv SafeBus-COL-15 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;