Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r307-tall-167873960900113.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is Philosophers-COL-100000, examination is StableMarking
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r307-tall-167873960900113
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 4.8M
-rw-r--r-- 1 mcc users 4.6K Feb 25 13:07 CTLCardinality.txt
-rw-r--r-- 1 mcc users 39K Feb 25 13:07 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.5K Feb 25 13:07 CTLFireability.txt
-rw-r--r-- 1 mcc users 64K Feb 25 13:07 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.8K Feb 25 16:33 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Feb 25 16:33 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Feb 25 16:33 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 25 16:33 LTLFireability.xml
-rw-r--r-- 1 mcc users 6.9K Feb 25 13:07 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 61K Feb 25 13:07 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 4.8K Feb 25 13:07 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 33K Feb 25 13:07 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 16:33 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 16:33 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Mar 5 18:23 equiv_pt
-rw-r--r-- 1 mcc users 7 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 5 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 4.5M Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME StableMarking

=== Now, execution of the tool begins

BK_START 1678862228039

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StableMarking
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=1800
BK_INPUT=Philosophers-COL-100000
Not applying reductions.
Model is COL
StableMarking COL
Running Version 202303021504
[2023-03-15 06:37:09] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StableMarking, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2023-03-15 06:37:09] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-15 06:37:09] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[2023-03-15 06:37:10] [WARNING] Using fallBack plugin, rng conformance not checked
[2023-03-15 06:37:11] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 1477 ms
[2023-03-15 06:37:11] [INFO ] Imported 5 HL places and 5 HL transitions for a total of 500000 PT places and 500000.0 transition bindings in 44 ms.
[2023-03-15 06:37:11] [INFO ] Built PT skeleton of HLPN with 5 places and 5 transitions 15 arcs in 5 ms.
[2023-03-15 06:37:11] [INFO ] Skeletonized 0 HLPN properties in 0 ms.
Incomplete random walk after 100001 steps, including 0 resets, run finished after 50 ms. (steps per millisecond=2000 ) properties (out of 5) seen :3
Finished Best-First random walk after 22 steps, including 0 resets, run visited all 2 properties in 3 ms. (steps per millisecond=7 )
[2023-03-15 06:37:11] [INFO ] Flatten gal took : 20 ms
[2023-03-15 06:37:11] [INFO ] Flatten gal took : 1 ms
[2023-03-15 06:37:11] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality337742845441956004.gal : 4 ms
[2023-03-15 06:37:11] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality7632974002249311890.prop : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality337742845441956004.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality7632974002249311890.prop' '--nowitness' '--gen-order' 'FOLLOW'
ITS runner failed with exception null

java.lang.InterruptedException
at java.base/java.lang.Object.wait(Native Method)
at java.base/java.lang.Thread.join(Thread.java:1304)
at java.base/java.lang.Thread.join(Thread.java:1372)
at fr.lip6.move.gal.application.runner.AbstractRunner.join(AbstractRunner.java:27)
at fr.lip6.move.gal.application.runner.its.ITSRunner.join(ITSRunner.java:177)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.verifyWithSDD(GlobalPropertySolver.java:675)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.lambda$2(ReachabilitySolver.java:63)
at java.base/java.lang.Thread.run(Thread.java:833)
its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...327
Loading property file /tmp/ReachabilityCardinality7632974002249311890.prop.
Able to resolve query StableMarking after proving 5 properties.
ITS-tools command line returned an error code 1
An unexpected exception occurred : Overflow error when converting initial marking. Please recompile libDDD with larger DDD::val_t definition.
[2023-03-15 06:37:13] [INFO ] Unfolded HLPN to a Petri net with 500000 places and 500000 transitions 1600000 arcs in 1783 ms.
[2023-03-15 06:37:13] [INFO ] Unfolded 5 HLPN properties in 34 ms.
[2023-03-15 06:37:33] [INFO ] Flatten gal took : 15158 ms
Interrupted random walk after 678 steps, including 0 resets, run timeout after 30031 ms. (steps per millisecond=0 ) properties seen 4
[2023-03-15 06:37:46] [INFO ] Flatten gal took : 13321 ms
[2023-03-15 06:37:49] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality6854100059167779123.gal : 2398 ms
[2023-03-15 06:37:49] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality11114783492657182701.prop : 180 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality6854100059167779123.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality11114783492657182701.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Interrupted Best-First random walk after 1001 steps, including 0 resets, run timeout after 7961 ms. (steps per millisecond=0 ) properties seen 0
Running SMT prover for 1 properties.
// Phase 1: matrix 500000 rows 500000 cols
[2023-03-15 06:37:56] [INFO ] Computed 200000 place invariants in 2322 ms
java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Error writing to Z3 solver: java.io.IOException: Stream closed...
at fr.lip6.move.gal.structural.smt.SMTUtils.execAndCheckResult(SMTUtils.java:251)
at fr.lip6.move.gal.structural.smt.DeadlockTester.verifyPossible(DeadlockTester.java:609)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMTIncremental(DeadlockTester.java:339)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMT(DeadlockTester.java:223)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.applyReductions(ReachabilitySolver.java:95)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.applyReachabilitySolver(GlobalPropertySolver.java:724)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.solveProperty(GlobalPropertySolver.java:558)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.preSolveLiveness(GlobalPropertySolver.java:412)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.preStableMarking(GlobalPropertySolver.java:321)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.solveProperty(GlobalPropertySolver.java:294)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:386)
at fr.lip6.move.gal.application.Application.start(Application.java:178)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:45)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:402)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:568)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2023-03-15 06:38:23] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
[2023-03-15 06:38:23] [INFO ] After 26489ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0
Parikh walk visited 0 properties in 7 ms.
Support contains 100000 out of 500000 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 500000/500000 places, 500000/500000 transitions.
Detected timeout of ITS tools.
[2023-03-15 06:48:06] [INFO ] Flatten gal took : 15152 ms
[2023-03-15 06:48:06] [INFO ] Applying decomposition
[2023-03-15 06:48:20] [INFO ] Flatten gal took : 14106 ms
TIME LIMIT: Killed by timeout after 1800 seconds
MemTotal: 16393216 kB
MemFree: 136156 kB
After kill :
MemTotal: 16393216 kB
MemFree: 150212 kB

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StableMarking = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StableMarking -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Philosophers-COL-100000"
export BK_EXAMINATION="StableMarking"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is Philosophers-COL-100000, examination is StableMarking"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r307-tall-167873960900113"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Philosophers-COL-100000.tgz
mv Philosophers-COL-100000 execution
cd execution
if [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "UpperBounds" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] || [ "StableMarking" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StableMarking" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StableMarking" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StableMarking.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StableMarking.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StableMarking.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StableMarking.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StableMarking" = "ReachabilityDeadlock" ] || [ "StableMarking" = "QuasiLiveness" ] || [ "StableMarking" = "StableMarking" ] || [ "StableMarking" = "Liveness" ] || [ "StableMarking" = "OneSafe" ] ; then
echo "FORMULA_NAME StableMarking"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;