Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r293-tall-167873945700648.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.......................................................................................................................................................
=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is PolyORBNT-COL-S05J30, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r293-tall-167873945700648
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 476K
-rw-r--r-- 1 mcc users 6.4K Feb 25 23:22 CTLCardinality.txt
-rw-r--r-- 1 mcc users 57K Feb 25 23:22 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.3K Feb 25 23:20 CTLFireability.txt
-rw-r--r-- 1 mcc users 54K Feb 25 23:20 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.1K Feb 25 16:36 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K Feb 25 16:36 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Feb 25 16:36 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K Feb 25 16:36 LTLFireability.xml
-rw-r--r-- 1 mcc users 11K Feb 25 23:29 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 94K Feb 25 23:29 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 7.5K Feb 25 23:27 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 54K Feb 25 23:27 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K Feb 25 16:36 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 16:36 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Mar 5 18:23 equiv_pt
-rw-r--r-- 1 mcc users 7 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 5 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 92K Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1678926501473

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=PolyORBNT-COL-S05J30
Not applying reductions.
Model is COL
StateSpace COL
Running Version 202303021504
[2023-03-16 00:28:22] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-16 00:28:22] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-16 00:28:23] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[2023-03-16 00:28:23] [WARNING] Using fallBack plugin, rng conformance not checked
[2023-03-16 00:28:23] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 521 ms
[2023-03-16 00:28:23] [INFO ] Imported 48 HL places and 38 HL transitions for a total of 519 PT places and 1492.0 transition bindings in 20 ms.
[2023-03-16 00:28:23] [INFO ] Unfolded HLPN to a Petri net with 519 places and 1430 transitions 9824 arcs in 46 ms.
[2023-03-16 00:28:23] [INFO ] Unfolded 0 HLPN properties in 0 ms.
Deduced a syphon composed of 30 places in 7 ms
Reduce places removed 30 places and 30 transitions.
Ensure Unique test removed 655 transitions
Reduce redundant transitions removed 655 transitions.
Starting structural reductions in STATESPACE mode, iteration 0 : 489/489 places, 745/745 transitions.
[2023-03-16 00:28:23] [INFO ] Flow matrix only has 741 transitions (discarded 4 similar events)
// Phase 1: matrix 741 rows 489 cols
[2023-03-16 00:28:23] [INFO ] Computed 82 place invariants in 49 ms
[2023-03-16 00:28:24] [INFO ] Dead Transitions using invariants and state equation in 723 ms found 95 transitions.
Found 95 dead transitions using SMT.
Drop transitions removed 95 transitions
Dead transitions reduction (with SMT) triggered by suspicious arc values removed 95 transitions.
[2023-03-16 00:28:24] [INFO ] Redundant transitions in 37 ms returned []
Starting structural reductions in STATESPACE mode, iteration 1 : 489/489 places, 650/745 transitions.
Finished structural reductions in STATESPACE mode , in 1 iterations and 836 ms. Remains : 489/489 places, 650/745 transitions.
Final net has 489 places and 650 transitions.
[2023-03-16 00:28:26] [INFO ] Flatten gal took : 92 ms
[2023-03-16 00:28:26] [INFO ] Applying decomposition
[2023-03-16 00:28:26] [INFO ] Flatten gal took : 61 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph10148672014781188304.txt' '-o' '/tmp/graph10148672014781188304.bin' '-w' '/tmp/graph10148672014781188304.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph10148672014781188304.bin' '-l' '-1' '-v' '-w' '/tmp/graph10148672014781188304.weights' '-q' '0' '-e' '0.001'
[2023-03-16 00:28:26] [INFO ] Decomposing Gal with order
[2023-03-16 00:28:26] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-16 00:28:27] [INFO ] Removed a total of 899 redundant transitions.
[2023-03-16 00:28:27] [INFO ] Flatten gal took : 136 ms
[2023-03-16 00:28:27] [INFO ] Fuse similar labels procedure discarded/fused a total of 5 labels/synchronizations in 14 ms.
[2023-03-16 00:28:27] [INFO ] Time to serialize gal into /tmp/StateSpace5577381156206711494.gal : 13 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace5577381156206711494.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Detected timeout of ITS tools.
[2023-03-16 00:49:07] [INFO ] Applying decomposition
[2023-03-16 00:49:08] [INFO ] Flatten gal took : 357 ms
[2023-03-16 00:49:08] [INFO ] Decomposing Gal with order
[2023-03-16 00:49:08] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-16 00:49:28] [INFO ] Removed a total of 2111 redundant transitions.
[2023-03-16 00:49:28] [INFO ] Flatten gal took : 19679 ms
[2023-03-16 00:49:29] [INFO ] Fuse similar labels procedure discarded/fused a total of 0 labels/synchronizations in 115 ms.
[2023-03-16 00:49:29] [INFO ] Time to serialize gal into /tmp/StateSpace1849418918703236554.gal : 126 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/StateSpace1849418918703236554.gal' '-t' 'CGAL' '--stats'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...219
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
petri\_inst\_inst\_mod\_flat,3.52927e+09,280.15,3868796,1.44372e+06,28,7.48142e+06,2251,1630,5.99906e+06,50,2014,0
Total reachable state count : 3529271162

Max variable value : 10
STATE_SPACE MAX_TOKEN_IN_PLACE 10 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Maximum sum along a path : 68
STATE_SPACE MAX_TOKEN_PER_MARKING 68 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Exact state count : 3529271162
STATE_SPACE STATES 3529271162 TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Total runtime 1559518 ms.

BK_STOP 1678928066105

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ StateSpace = StateSpace ]]
+ [[ -f modelMain.xml ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
++ perl -pe 's/.*\.//g'
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBNT-COL-S05J30"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is PolyORBNT-COL-S05J30, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r293-tall-167873945700648"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBNT-COL-S05J30.tgz
mv PolyORBNT-COL-S05J30 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;