Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r293-tall-167873945000162.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is Philosophers-COL-010000, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r293-tall-167873945000162
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 856K
-rw-r--r-- 1 mcc users 7.0K Feb 26 02:42 CTLCardinality.txt
-rw-r--r-- 1 mcc users 70K Feb 26 02:42 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.6K Feb 25 18:53 CTLFireability.txt
-rw-r--r-- 1 mcc users 49K Feb 25 18:53 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.8K Jan 29 11:40 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.9K Feb 25 16:33 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K Feb 25 16:33 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Feb 25 16:33 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Feb 25 16:33 LTLFireability.xml
-rw-r--r-- 1 mcc users 8.5K Feb 26 20:40 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 81K Feb 26 20:40 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.1K Feb 26 11:48 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 68K Feb 26 11:48 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 16:33 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 16:33 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 Mar 5 18:23 equiv_pt
-rw-r--r-- 1 mcc users 7 Mar 5 18:23 instance
-rw-r--r-- 1 mcc users 5 Mar 5 18:23 iscolored
-rw-r--r-- 1 mcc users 447K Mar 5 18:23 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Philosophers-COL-010000-CTLFireability-00
FORMULA_NAME Philosophers-COL-010000-CTLFireability-01
FORMULA_NAME Philosophers-COL-010000-CTLFireability-02
FORMULA_NAME Philosophers-COL-010000-CTLFireability-03
FORMULA_NAME Philosophers-COL-010000-CTLFireability-04
FORMULA_NAME Philosophers-COL-010000-CTLFireability-05
FORMULA_NAME Philosophers-COL-010000-CTLFireability-06
FORMULA_NAME Philosophers-COL-010000-CTLFireability-07
FORMULA_NAME Philosophers-COL-010000-CTLFireability-08
FORMULA_NAME Philosophers-COL-010000-CTLFireability-09
FORMULA_NAME Philosophers-COL-010000-CTLFireability-10
FORMULA_NAME Philosophers-COL-010000-CTLFireability-11
FORMULA_NAME Philosophers-COL-010000-CTLFireability-12
FORMULA_NAME Philosophers-COL-010000-CTLFireability-13
FORMULA_NAME Philosophers-COL-010000-CTLFireability-14
FORMULA_NAME Philosophers-COL-010000-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1678798791904

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=CTLFireability
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Philosophers-COL-010000
Not applying reductions.
Model is COL
CTLFireability COL
Running Version 202303021504
[2023-03-14 12:59:53] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-14 12:59:53] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-14 12:59:53] [INFO ] Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
log4j:WARN No appenders could be found for logger (org.apache.axiom.locator.DefaultOMMetaFactoryLocator).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[2023-03-14 12:59:56] [WARNING] Using fallBack plugin, rng conformance not checked
[2023-03-14 12:59:57] [INFO ] Load time of PNML (colored model parsed with PNMLFW) : 4168 ms
[2023-03-14 12:59:57] [INFO ] Imported 5 HL places and 5 HL transitions for a total of 50000 PT places and 50000.0 transition bindings in 26 ms.
Parsed 16 properties from file /home/mcc/execution/CTLFireability.xml in 11 ms.
[2023-03-14 12:59:57] [INFO ] Built PT skeleton of HLPN with 5 places and 5 transitions 15 arcs in 5 ms.
[2023-03-14 12:59:57] [INFO ] Skeletonized 16 HLPN properties in 2 ms.
Computed a total of 0 stabilizing places and 0 stable transitions
All 16 properties of the HLPN use transition enablings in a way that makes the skeleton too coarse.
Arc [1:1*[(MOD (ADD (MOD (MINUS $x 1) 10000) 10000) 10000)]] contains successor/predecessor on variables of sort Philo
[2023-03-14 12:59:58] [INFO ] Unfolded HLPN to a Petri net with 50000 places and 50000 transitions 160000 arcs in 356 ms.
[2023-03-14 12:59:58] [INFO ] Unfolded 16 HLPN properties in 71 ms.
Support contains 50000 out of 50000 places. Attempting structural reductions.
Starting structural reductions in LTL mode, iteration 0 : 50000/50000 places, 50000/50000 transitions.
Applied a total of 0 rules in 186 ms. Remains 50000 /50000 variables (removed 0) and now considering 50000/50000 (removed 0) transitions.
// Phase 1: matrix 50000 rows 50000 cols
[2023-03-14 13:11:41] [INFO ] Computed 20000 place invariants in 243 ms
[2023-03-14 13:11:45] [INFO ] Implicit Places using invariants in 4433 ms returned []
Implicit Place search using SMT only with invariants took 4457 ms to find 0 implicit places.
[2023-03-14 13:11:45] [INFO ] Invariant cache hit.
[2023-03-14 13:11:49] [INFO ] Dead Transitions using invariants and state equation in 3766 ms found 0 transitions.
Finished structural reductions in LTL mode , in 1 iterations and 8417 ms. Remains : 50000/50000 places, 50000/50000 transitions.
Support contains 50000 out of 50000 places after structural reductions.
[2023-03-14 13:12:01] [INFO ] Flatten gal took : 5945 ms
[2023-03-14 13:13:15] [INFO ] Flatten gal took : 8432 ms
[2023-03-14 13:14:31] [INFO ] Input system was already deterministic with 50000 transitions.
Interrupted random walk after 8951 steps, including 2 resets, run timeout after 30001 ms. (steps per millisecond=0 ) properties seen 15
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 8023 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 5082 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 8604 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 8507 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 5164 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 5792 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 5133 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 5073 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 8847 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 5209 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 5425 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 9685 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 5810 ms. (steps per millisecond=0 ) properties seen 0
Interrupted Best-First random walk after 2001 steps, including 0 resets, run timeout after 9541 ms. (steps per millisecond=0 ) properties seen 0
Running SMT prover for 14 properties.
[2023-03-14 13:16:43] [INFO ] Invariant cache hit.
java.lang.RuntimeException: SMT solver raised an error when submitting script. Raised (error "Failed to assert expression: java.io.IOException: Stream close...
at fr.lip6.move.gal.structural.smt.SMTUtils.execAndCheckResult(SMTUtils.java:251)
at fr.lip6.move.gal.structural.smt.DeadlockTester.assertInvariants(DeadlockTester.java:2340)
at fr.lip6.move.gal.structural.smt.DeadlockTester.verifyPossible(DeadlockTester.java:618)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMTIncremental(DeadlockTester.java:339)
at fr.lip6.move.gal.structural.smt.DeadlockTester.testUnreachableWithSMT(DeadlockTester.java:223)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.applyReductions(ReachabilitySolver.java:95)
at fr.lip6.move.gal.application.solver.logic.AtomicReducerSR.checkAtomicPropositionsLogic(AtomicReducerSR.java:105)
at fr.lip6.move.gal.application.solver.logic.AtomicReducerSR.strongReductions(AtomicReducerSR.java:44)
at fr.lip6.move.gal.application.solver.ltl.LTLPropertySolver.preSolveForLogic(LTLPropertySolver.java:176)
at fr.lip6.move.gal.application.Application.startNoEx(Application.java:626)
at fr.lip6.move.gal.application.Application.start(Application.java:178)
at fr.lip6.move.gal.itscl.application.Application.start(Application.java:45)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:203)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:136)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:402)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:255)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:568)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:659)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:596)
at org.eclipse.equinox.launcher.Main.run(Main.java:1467)
at org.eclipse.equinox.launcher.Main.main(Main.java:1440)
[2023-03-14 13:17:08] [WARNING] SMT solver failed with error :SMT solver raised an error when submitting script.... while checking expressions.
[2023-03-14 13:17:08] [INFO ] After 25407ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0
Fused 14 Parikh solutions to 1 different solutions.
Parikh walk visited 0 properties in 1 ms.
Support contains 50000 out of 50000 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 50000/50000 places, 50000/50000 transitions.
Applied a total of 0 rules in 427 ms. Remains 50000 /50000 variables (removed 0) and now considering 50000/50000 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 429 ms. Remains : 50000/50000 places, 50000/50000 transitions.
[2023-03-14 13:20:32] [INFO ] Flatten gal took : 5324 ms
[2023-03-14 13:21:46] [INFO ] Flatten gal took : 8712 ms
[2023-03-14 13:23:02] [INFO ] Input system was already deterministic with 50000 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Starting structural reductions in LTL mode, iteration 0 : 50000/50000 places, 50000/50000 transitions.
Applied a total of 0 rules in 89 ms. Remains 50000 /50000 variables (removed 0) and now considering 50000/50000 (removed 0) transitions.
[2023-03-14 13:28:26] [INFO ] Invariant cache hit.
[2023-03-14 13:28:30] [INFO ] Implicit Places using invariants in 3792 ms returned []
Implicit Place search using SMT only with invariants took 3793 ms to find 0 implicit places.
[2023-03-14 13:28:30] [INFO ] Invariant cache hit.
[2023-03-14 13:28:33] [INFO ] Dead Transitions using invariants and state equation in 3568 ms found 0 transitions.
Finished structural reductions in LTL mode , in 1 iterations and 7455 ms. Remains : 50000/50000 places, 50000/50000 transitions.
[2023-03-14 13:29:00] [INFO ] Flatten gal took : 1552 ms
[2023-03-14 13:29:02] [INFO ] Flatten gal took : 1870 ms
[2023-03-14 13:29:05] [INFO ] Input system was already deterministic with 50000 transitions.
[2023-03-14 13:29:08] [INFO ] Flatten gal took : 1877 ms
[2023-03-14 13:29:10] [INFO ] Flatten gal took : 1871 ms
[2023-03-14 13:29:11] [INFO ] Time to serialize gal into /tmp/CTLFireability16211733444466768492.gal : 274 ms
[2023-03-14 13:29:11] [INFO ] Time to serialize properties into /tmp/CTLFireability8695409405450669952.ctl : 303 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-ctl-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/CTLFireability16211733444466768492.gal' '-t' 'CGAL' '-ctl' '/tmp/CTLFireability8695409405450669952.ctl' '--gen-order' 'FOLLOW'

its-ctl command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -...284
Detected timeout of ITS tools.
[2023-03-14 13:29:44] [INFO ] Flatten gal took : 2050 ms
[2023-03-14 13:29:44] [INFO ] Applying decomposition
[2023-03-14 13:29:45] [INFO ] Flatten gal took : 1937 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph5733286362143746286.txt' '-o' '/tmp/graph5733286362143746286.bin' '-w' '/tmp/graph5733286362143746286.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph5733286362143746286.bin' '-l' '-1' '-v' '-w' '/tmp/graph5733286362143746286.weights' '-q' '0' '-e' '0.001'
[2023-03-14 13:29:51] [INFO ] Decomposing Gal with order
[2023-03-14 13:30:08] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-14 13:41:37] [INFO ] Removed a total of 9910 redundant transitions.
[2023-03-14 13:41:39] [INFO ] Flatten gal took : 3582 ms
TIME LIMIT: Killed by timeout after 3600 seconds
MemTotal: 16393232 kB
MemFree: 7865948 kB
After kill :
MemTotal: 16393232 kB
MemFree: 16090328 kB

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination CTLFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Philosophers-COL-010000"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is Philosophers-COL-010000, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r293-tall-167873945000162"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Philosophers-COL-010000.tgz
mv Philosophers-COL-010000 execution
cd execution
if [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "UpperBounds" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] || [ "CTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;