Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r256-tall-167856441000369.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool gold2022
Input is MAPK-PT-00320, examination is Liveness
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r256-tall-167856441000369
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 432K
-rw-r--r-- 1 mcc users 7.7K Feb 26 10:50 CTLCardinality.txt
-rw-r--r-- 1 mcc users 79K Feb 26 10:50 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.6K Feb 26 10:50 CTLFireability.txt
-rw-r--r-- 1 mcc users 56K Feb 26 10:50 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.8K Feb 25 16:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Feb 25 16:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K Feb 25 16:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 25 16:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 9.5K Feb 26 10:51 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 88K Feb 26 10:51 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 7.1K Feb 26 10:51 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 60K Feb 26 10:51 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Feb 25 16:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Feb 25 16:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 25K Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME Liveness

=== Now, execution of the tool begins

BK_START 1678668921588

Running Version 202205111006
[2023-03-13 00:55:22] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, Liveness, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2023-03-13 00:55:22] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-13 00:55:22] [INFO ] Load time of PNML (sax parser for PT used): 56 ms
[2023-03-13 00:55:22] [INFO ] Transformed 22 places.
[2023-03-13 00:55:22] [INFO ] Transformed 30 transitions.
[2023-03-13 00:55:22] [INFO ] Parsed PT model containing 22 places and 30 transitions in 160 ms.
Discarding 10 transitions out of 30. Remains 20
Built sparse matrix representations for Structural reductions in 4 ms.8279KB memory used
Starting structural reductions in DEADLOCKS mode, iteration 0 : 22/22 places, 30/30 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 9 ms. Remains 22 /22 variables (removed 0) and now considering 30/30 (removed 0) transitions.
Finished structural reductions, in 1 iterations. Remains : 22/22 places, 30/30 transitions.
Starting structural reductions in DEADLOCKS mode, iteration 0 : 22/22 places, 30/30 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 0 rules in 3 ms. Remains 22 /22 variables (removed 0) and now considering 30/30 (removed 0) transitions.
// Phase 1: matrix 30 rows 22 cols
[2023-03-13 00:55:23] [INFO ] Computed 7 place invariants in 6 ms
[2023-03-13 00:55:23] [INFO ] Implicit Places using invariants in 110 ms returned []
// Phase 1: matrix 30 rows 22 cols
[2023-03-13 00:55:23] [INFO ] Computed 7 place invariants in 16 ms
[2023-03-13 00:55:23] [INFO ] Implicit Places using invariants and state equation in 80 ms returned []
Implicit Place search using SMT with State Equation took 219 ms to find 0 implicit places.
[2023-03-13 00:55:23] [INFO ] Redundant transitions in 1 ms returned []
// Phase 1: matrix 30 rows 22 cols
[2023-03-13 00:55:23] [INFO ] Computed 7 place invariants in 1 ms
[2023-03-13 00:55:23] [INFO ] Dead Transitions using invariants and state equation in 46 ms found 0 transitions.
Finished structural reductions, in 1 iterations. Remains : 22/22 places, 30/30 transitions.
Random walk for 1250028 steps, including 0 resets, run took 283 ms (no deadlock found). (steps per millisecond=4417 )
Random directed walk for 1250043 steps, including 0 resets, run took 245 ms (no deadlock found). (steps per millisecond=5102 )
// Phase 1: matrix 30 rows 22 cols
[2023-03-13 00:55:23] [INFO ] Computed 7 place invariants in 2 ms
[2023-03-13 00:55:23] [INFO ] [Real]Absence check using 7 positive place invariants in 1 ms returned unsat
Starting structural reductions in LIVENESS mode, iteration 0 : 22/22 places, 30/30 transitions.
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 0 place count 22 transition count 29
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 3 place count 20 transition count 29
Performed 9 Post agglomeration using F-continuation condition.Transition count delta: 9
Deduced a syphon composed of 9 places in 0 ms
Reduce places removed 12 places and 0 transitions.
Iterating global reduction 0 with 21 rules applied. Total rules applied 24 place count 8 transition count 20
Graph (trivial) has 12 edges and 8 vertex of which 2 / 8 are part of one of the 1 SCC in 7 ms
Free SCC test removed 1 places
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 0 with 2 rules applied. Total rules applied 26 place count 6 transition count 20
Ensure Unique test removed 4 transitions
Reduce isomorphic transitions removed 4 transitions.
Graph (trivial) has 11 edges and 6 vertex of which 3 / 6 are part of one of the 1 SCC in 0 ms
Free SCC test removed 2 places
Iterating post reduction 0 with 5 rules applied. Total rules applied 31 place count 4 transition count 16
Reduce places removed 1 places and 0 transitions.
Ensure Unique test removed 8 transitions
Reduce isomorphic transitions removed 8 transitions.
Graph (trivial) has 7 edges and 3 vertex of which 3 / 3 are part of one of the 1 SCC in 0 ms
Free SCC test removed 2 places
Iterating post reduction 1 with 10 rules applied. Total rules applied 41 place count 1 transition count 8
Reduce places removed 1 places and 0 transitions.
Ensure Unique test removed 7 transitions
Reduce isomorphic transitions removed 7 transitions.
Iterating post reduction 2 with 8 rules applied. Total rules applied 49 place count 0 transition count 1
Applied a total of 49 rules in 13 ms. Remains 0 /22 variables (removed 22) and now considering 1/30 (removed 29) transitions.
[2023-03-13 00:55:23] [INFO ] Computed 0 place invariants in 0 ms
[2023-03-13 00:55:23] [INFO ] Implicit Places using invariants in 6 ms returned []
[2023-03-13 00:55:23] [INFO ] Computed 0 place invariants in 0 ms
[2023-03-13 00:55:23] [INFO ] Implicit Places using invariants and state equation in 18 ms returned []
Implicit Place search using SMT with State Equation took 25 ms to find 0 implicit places.
[2023-03-13 00:55:23] [INFO ] Computed 0 place invariants in 0 ms
[2023-03-13 00:55:23] [INFO ] Dead Transitions using invariants and state equation in 4 ms found 0 transitions.
Starting structural reductions in LIVENESS mode, iteration 1 : 0/22 places, 1/30 transitions.
Finished structural reductions, in 1 iterations. Remains : 0/22 places, 1/30 transitions.
Able to resolve query QuasiLiveness after proving 1 properties.
Starting structural reductions in LIVENESS mode, iteration 0 : 22/22 places, 30/30 transitions.
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 0 place count 22 transition count 29
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 3 place count 20 transition count 29
Performed 9 Post agglomeration using F-continuation condition.Transition count delta: 9
Deduced a syphon composed of 9 places in 1 ms
Reduce places removed 12 places and 0 transitions.
Iterating global reduction 0 with 21 rules applied. Total rules applied 24 place count 8 transition count 20
Graph (trivial) has 12 edges and 8 vertex of which 2 / 8 are part of one of the 1 SCC in 0 ms
Free SCC test removed 1 places
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 0 with 2 rules applied. Total rules applied 26 place count 6 transition count 20
Ensure Unique test removed 4 transitions
Reduce isomorphic transitions removed 4 transitions.
Graph (trivial) has 11 edges and 6 vertex of which 3 / 6 are part of one of the 1 SCC in 0 ms
Free SCC test removed 2 places
Iterating post reduction 0 with 5 rules applied. Total rules applied 31 place count 4 transition count 16
Reduce places removed 1 places and 0 transitions.
Ensure Unique test removed 8 transitions
Reduce isomorphic transitions removed 8 transitions.
Graph (trivial) has 7 edges and 3 vertex of which 3 / 3 are part of one of the 1 SCC in 0 ms
Free SCC test removed 2 places
Iterating post reduction 1 with 10 rules applied. Total rules applied 41 place count 1 transition count 8
Reduce places removed 1 places and 0 transitions.
Ensure Unique test removed 7 transitions
Reduce isomorphic transitions removed 7 transitions.
Iterating post reduction 2 with 8 rules applied. Total rules applied 49 place count 0 transition count 1
Applied a total of 49 rules in 3 ms. Remains 0 /22 variables (removed 22) and now considering 1/30 (removed 29) transitions.
[2023-03-13 00:55:23] [INFO ] Computed 0 place invariants in 1 ms
[2023-03-13 00:55:23] [INFO ] Implicit Places using invariants in 12 ms returned []
[2023-03-13 00:55:23] [INFO ] Computed 0 place invariants in 0 ms
[2023-03-13 00:55:23] [INFO ] Implicit Places using invariants and state equation in 18 ms returned []
Implicit Place search using SMT with State Equation took 32 ms to find 0 implicit places.
[2023-03-13 00:55:23] [INFO ] Computed 0 place invariants in 0 ms
[2023-03-13 00:55:23] [INFO ] Dead Transitions using invariants and state equation in 6 ms found 0 transitions.
Starting structural reductions in LIVENESS mode, iteration 1 : 0/22 places, 1/30 transitions.
Finished structural reductions, in 1 iterations. Remains : 0/22 places, 1/30 transitions.
Able to resolve query Liveness after proving 1 properties.
FORMULA Liveness TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Total runtime 1165 ms.

BK_STOP 1678668923963

--------------------
content from stderr:

+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ Liveness = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution Liveness -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination Liveness -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPK-PT-00320"
export BK_EXAMINATION="Liveness"
export BK_TOOL="gold2022"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool gold2022"
echo " Input is MAPK-PT-00320, examination is Liveness"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r256-tall-167856441000369"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPK-PT-00320.tgz
mv MAPK-PT-00320 execution
cd execution
if [ "Liveness" = "ReachabilityDeadlock" ] || [ "Liveness" = "UpperBounds" ] || [ "Liveness" = "QuasiLiveness" ] || [ "Liveness" = "StableMarking" ] || [ "Liveness" = "Liveness" ] || [ "Liveness" = "OneSafe" ] || [ "Liveness" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "Liveness" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "Liveness" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "Liveness.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property Liveness.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "Liveness.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' Liveness.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "Liveness" = "ReachabilityDeadlock" ] || [ "Liveness" = "QuasiLiveness" ] || [ "Liveness" = "StableMarking" ] || [ "Liveness" = "Liveness" ] || [ "Liveness" = "OneSafe" ] ; then
echo "FORMULA_NAME Liveness"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;