Execution Chart

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Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r234-tall-167856420600657.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool marciexred
Input is Medical-PT-04, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r234-tall-167856420600657
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 3.5M
-rw-r--r-- 1 mcc users 5.1K Feb 25 14:43 CTLCardinality.txt
-rw-r--r-- 1 mcc users 43K Feb 25 14:43 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.6K Feb 25 14:40 CTLFireability.txt
-rw-r--r-- 1 mcc users 52K Feb 25 14:40 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K Feb 25 16:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Feb 25 16:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K Feb 25 16:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K Feb 25 16:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 9.3K Feb 25 14:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 87K Feb 25 14:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 9.2K Feb 25 14:45 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 78K Feb 25 14:45 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Feb 25 16:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Feb 25 16:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 3 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 3.1M Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Medical-PT-04-CTLCardinality-00
FORMULA_NAME Medical-PT-04-CTLCardinality-01
FORMULA_NAME Medical-PT-04-CTLCardinality-02
FORMULA_NAME Medical-PT-04-CTLCardinality-03
FORMULA_NAME Medical-PT-04-CTLCardinality-04
FORMULA_NAME Medical-PT-04-CTLCardinality-05
FORMULA_NAME Medical-PT-04-CTLCardinality-06
FORMULA_NAME Medical-PT-04-CTLCardinality-07
FORMULA_NAME Medical-PT-04-CTLCardinality-08
FORMULA_NAME Medical-PT-04-CTLCardinality-09
FORMULA_NAME Medical-PT-04-CTLCardinality-10
FORMULA_NAME Medical-PT-04-CTLCardinality-11
FORMULA_NAME Medical-PT-04-CTLCardinality-12
FORMULA_NAME Medical-PT-04-CTLCardinality-13
FORMULA_NAME Medical-PT-04-CTLCardinality-14
FORMULA_NAME Medical-PT-04-CTLCardinality-15

=== Now, execution of the tool begins

BK_START 1679549322824

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=marciexred
BK_EXAMINATION=CTLCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Medical-PT-04
Applying reductions before tool marcie
Invoking reducer
Running Version 202303021504
[2023-03-23 05:28:44] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLCardinality, -timeout, 360, -rebuildPNML]
[2023-03-23 05:28:44] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-23 05:28:44] [INFO ] Load time of PNML (sax parser for PT used): 248 ms
[2023-03-23 05:28:44] [INFO ] Transformed 312 places.
[2023-03-23 05:28:44] [INFO ] Transformed 5431 transitions.
[2023-03-23 05:28:44] [INFO ] Parsed PT model containing 312 places and 5431 transitions and 28790 arcs in 341 ms.
Parsed 16 properties from file /home/mcc/execution/CTLCardinality.xml in 11 ms.
Deduced a syphon composed of 242 places in 19 ms
Reduce places removed 242 places and 5204 transitions.
Reduce places removed 1 places and 0 transitions.
FORMULA Medical-PT-04-CTLCardinality-01 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-05 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-09 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-10 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-12 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Support contains 5 out of 69 places. Attempting structural reductions.
Starting structural reductions in LTL mode, iteration 0 : 69/69 places, 227/227 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 68 transition count 227
Applied a total of 1 rules in 12 ms. Remains 68 /69 variables (removed 1) and now considering 227/227 (removed 0) transitions.
[2023-03-23 05:28:44] [INFO ] Flow matrix only has 182 transitions (discarded 45 similar events)
// Phase 1: matrix 182 rows 68 cols
[2023-03-23 05:28:44] [INFO ] Computed 9 place invariants in 14 ms
[2023-03-23 05:28:44] [INFO ] Implicit Places using invariants in 227 ms returned []
[2023-03-23 05:28:44] [INFO ] Flow matrix only has 182 transitions (discarded 45 similar events)
[2023-03-23 05:28:44] [INFO ] Invariant cache hit.
[2023-03-23 05:28:44] [INFO ] State equation strengthened by 56 read => feed constraints.
[2023-03-23 05:28:45] [INFO ] Implicit Places using invariants and state equation in 141 ms returned []
Implicit Place search using SMT with State Equation took 394 ms to find 0 implicit places.
[2023-03-23 05:28:45] [INFO ] Flow matrix only has 182 transitions (discarded 45 similar events)
[2023-03-23 05:28:45] [INFO ] Invariant cache hit.
[2023-03-23 05:28:45] [INFO ] Dead Transitions using invariants and state equation in 122 ms found 0 transitions.
Starting structural reductions in LTL mode, iteration 1 : 68/69 places, 227/227 transitions.
Finished structural reductions in LTL mode , in 1 iterations and 531 ms. Remains : 68/69 places, 227/227 transitions.
Support contains 5 out of 68 places after structural reductions.
[2023-03-23 05:28:45] [INFO ] Initial state reduction rules for CTL removed 4 formulas.
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 48 ms
[2023-03-23 05:28:45] [INFO ] Initial state reduction rules for CTL removed 3 formulas.
FORMULA Medical-PT-04-CTLCardinality-15 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-14 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-11 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-08 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-07 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-03 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-04-CTLCardinality-02 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 24 ms
[2023-03-23 05:28:45] [INFO ] Input system was already deterministic with 227 transitions.
Support contains 3 out of 68 places (down from 5) after GAL structural reductions.
Incomplete random walk after 10000 steps, including 54 resets, run finished after 84 ms. (steps per millisecond=119 ) properties (out of 4) seen :3
Incomplete Best-First random walk after 10001 steps, including 14 resets, run finished after 18 ms. (steps per millisecond=555 ) properties (out of 1) seen :0
Running SMT prover for 1 properties.
[2023-03-23 05:28:45] [INFO ] Flow matrix only has 182 transitions (discarded 45 similar events)
[2023-03-23 05:28:45] [INFO ] Invariant cache hit.
[2023-03-23 05:28:45] [INFO ] [Real]Absence check using 9 positive place invariants in 7 ms returned sat
[2023-03-23 05:28:45] [INFO ] After 46ms SMT Verify possible using all constraints in real domain returned unsat :1 sat :0
Fused 1 Parikh solutions to 0 different solutions.
Parikh walk visited 0 properties in 1 ms.
Successfully simplified 1 atomic propositions for a total of 3 simplifications.
FORMULA Medical-PT-04-CTLCardinality-04 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 16 ms
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 15 ms
[2023-03-23 05:28:45] [INFO ] Input system was already deterministic with 227 transitions.
Computed a total of 6 stabilizing places and 33 stable transitions
Graph (complete) has 479 edges and 68 vertex of which 67 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.3 ms
Starting structural reductions in LTL mode, iteration 0 : 68/68 places, 227/227 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 67 transition count 227
Applied a total of 1 rules in 2 ms. Remains 67 /68 variables (removed 1) and now considering 227/227 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 3 ms. Remains : 67/68 places, 227/227 transitions.
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 14 ms
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 14 ms
[2023-03-23 05:28:45] [INFO ] Input system was already deterministic with 227 transitions.
Starting structural reductions in LTL mode, iteration 0 : 68/68 places, 227/227 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 67 transition count 227
Applied a total of 1 rules in 3 ms. Remains 67 /68 variables (removed 1) and now considering 227/227 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 3 ms. Remains : 67/68 places, 227/227 transitions.
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 12 ms
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 13 ms
[2023-03-23 05:28:45] [INFO ] Input system was already deterministic with 227 transitions.
Starting structural reductions in LTL mode, iteration 0 : 68/68 places, 227/227 transitions.
Applied a total of 0 rules in 2 ms. Remains 68 /68 variables (removed 0) and now considering 227/227 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 2 ms. Remains : 68/68 places, 227/227 transitions.
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 28 ms
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 14 ms
[2023-03-23 05:28:45] [INFO ] Input system was already deterministic with 227 transitions.
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 11 ms
[2023-03-23 05:28:45] [INFO ] Flatten gal took : 11 ms
[2023-03-23 05:28:45] [INFO ] Export to MCC of 3 properties in file /home/mcc/execution/CTLCardinality.sr.xml took 1 ms.
[2023-03-23 05:28:45] [INFO ] Export to PNML in file /home/mcc/execution/model.sr.pnml of net with 68 places, 227 transitions and 1146 arcs took 3 ms.
Total runtime 1696 ms.
There are residual formulas that ITS could not solve within timeout
timeout --kill-after=10s --signal=SIGINT 1m for testing only

Marcie built on Linux at 2019-11-18.
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: /home/mcc/BenchKit/bin//../reducer/bin//../../marcie/bin/marcie --net-file=model.pnml --mcc-file=CTLCardinality.xml --memory=6 --mcc-mode

parse successfull
net created successfully

Net: Petri
(NrP: 68 NrTr: 227 NrArc: 1146)

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.001sec

net check time: 0m 0.000sec

init dd package: 0m 2.740sec


BK_STOP 1679552312056

--------------------
content from stderr:

+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination CTLCardinality -timeout 360 -rebuildPNML
check for maximal unmarked siphon
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.000sec

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Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Medical-PT-04"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="marciexred"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool marciexred"
echo " Input is Medical-PT-04, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r234-tall-167856420600657"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Medical-PT-04.tgz
mv Medical-PT-04 execution
cd execution
if [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "UpperBounds" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] || [ "CTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;