Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r234-tall-167856420500574.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool marciexred
Input is MAPK-PT-00080, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r234-tall-167856420500574
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 516K
-rw-r--r-- 1 mcc users 5.9K Feb 26 10:47 CTLCardinality.txt
-rw-r--r-- 1 mcc users 56K Feb 26 10:47 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.0K Feb 26 10:46 CTLFireability.txt
-rw-r--r-- 1 mcc users 59K Feb 26 10:46 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.2K Jan 29 11:40 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.7K Feb 25 16:21 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Feb 25 16:21 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K Feb 25 16:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 25 16:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 13K Feb 26 10:47 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 126K Feb 26 10:47 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 11K Feb 26 10:47 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 106K Feb 26 10:47 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Feb 25 16:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K Feb 25 16:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 25K Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-00
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-01
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-02
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-03
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-04
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-05
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-06
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-07
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-08
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-09
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-10
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-11
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-12
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-13
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-14
FORMULA_NAME MAPK-PT-00080-ReachabilityCardinality-15

=== Now, execution of the tool begins

BK_START 1679533325657

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=marciexred
BK_EXAMINATION=ReachabilityCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=MAPK-PT-00080
Applying reductions before tool marcie
Invoking reducer
Running Version 202303021504
[2023-03-23 01:02:07] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -timeout, 360, -rebuildPNML]
[2023-03-23 01:02:07] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-23 01:02:07] [INFO ] Load time of PNML (sax parser for PT used): 23 ms
[2023-03-23 01:02:07] [INFO ] Transformed 22 places.
[2023-03-23 01:02:07] [INFO ] Transformed 30 transitions.
[2023-03-23 01:02:07] [INFO ] Parsed PT model containing 22 places and 30 transitions and 90 arcs in 83 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityCardinality.xml in 15 ms.
Working with output stream class java.io.PrintStream
Incomplete random walk after 10002 steps, including 2 resets, run finished after 76 ms. (steps per millisecond=131 ) properties (out of 16) seen :10
FORMULA MAPK-PT-00080-ReachabilityCardinality-14 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA MAPK-PT-00080-ReachabilityCardinality-13 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA MAPK-PT-00080-ReachabilityCardinality-12 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA MAPK-PT-00080-ReachabilityCardinality-09 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA MAPK-PT-00080-ReachabilityCardinality-08 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA MAPK-PT-00080-ReachabilityCardinality-07 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA MAPK-PT-00080-ReachabilityCardinality-06 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA MAPK-PT-00080-ReachabilityCardinality-03 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA MAPK-PT-00080-ReachabilityCardinality-02 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA MAPK-PT-00080-ReachabilityCardinality-01 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 86 ms. (steps per millisecond=116 ) properties (out of 6) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 42 ms. (steps per millisecond=238 ) properties (out of 6) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 44 ms. (steps per millisecond=227 ) properties (out of 6) seen :0
Incomplete Best-First random walk after 10000 steps, including 2 resets, run finished after 67 ms. (steps per millisecond=149 ) properties (out of 6) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 37 ms. (steps per millisecond=270 ) properties (out of 6) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 31 ms. (steps per millisecond=322 ) properties (out of 6) seen :0
Running SMT prover for 6 properties.
// Phase 1: matrix 30 rows 22 cols
[2023-03-23 01:02:07] [INFO ] Computed 7 place invariants in 4 ms
[2023-03-23 01:02:07] [INFO ] After 141ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:6
[2023-03-23 01:02:07] [INFO ] [Nat]Absence check using 7 positive place invariants in 3 ms returned sat
[2023-03-23 01:02:07] [INFO ] After 26ms SMT Verify possible using state equation in natural domain returned unsat :5 sat :1
[2023-03-23 01:02:07] [INFO ] After 40ms SMT Verify possible using trap constraints in natural domain returned unsat :5 sat :1
Attempting to minimize the solution found.
Minimization took 13 ms.
[2023-03-23 01:02:07] [INFO ] After 109ms SMT Verify possible using all constraints in natural domain returned unsat :5 sat :1
FORMULA MAPK-PT-00080-ReachabilityCardinality-15 TRUE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
FORMULA MAPK-PT-00080-ReachabilityCardinality-11 FALSE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
FORMULA MAPK-PT-00080-ReachabilityCardinality-05 FALSE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
FORMULA MAPK-PT-00080-ReachabilityCardinality-04 TRUE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
FORMULA MAPK-PT-00080-ReachabilityCardinality-00 FALSE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
Fused 6 Parikh solutions to 1 different solutions.
Finished Parikh walk after 527 steps, including 0 resets, run visited all 1 properties in 4 ms. (steps per millisecond=131 )
FORMULA MAPK-PT-00080-ReachabilityCardinality-10 FALSE TECHNIQUES TOPOLOGICAL PARIKH_WALK
Parikh walk visited 1 properties in 4 ms.
All properties solved without resorting to model-checking.
Total runtime 840 ms.
timeout --kill-after=10s --signal=SIGINT 1m for testing only

Marcie built on Linux at 2019-11-18.
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: /home/mcc/BenchKit/bin//../reducer/bin//../../marcie/bin/marcie --net-file=model.pnml --mcc-file=ReachabilityCardinality.xml --memory=6 --mcc-mode

parse successfull
net created successfully

Net: MAPK_PT_00080
(NrP: 22 NrTr: 30 NrArc: 90)

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec

net check time: 0m 0.000sec

init dd package: 0m 2.730sec


RS generation: 0m 2.950sec


-> reachability set: #nodes 179452 (1.8e+05) #states 5,634,903,909,420,423,840 (18)



starting MCC model checker
--------------------------

checking: AG [MEKP_RafP<=60]
normalized: ~ [E [true U ~ [MEKP_RafP<=60]]]

abstracting: (MEKP_RafP<=60)
states: 5,634,903,909,420,423,840 (18)
-> the formula is TRUE

FORMULA MAPK-PT-00080-ReachabilityCardinality-04 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.012sec

checking: EF [17<=MEKPP]
normalized: E [true U 17<=MEKPP]

abstracting: (17<=MEKPP)
states: 166,627,783,365,771,096 (17)
-> the formula is TRUE

FORMULA MAPK-PT-00080-ReachabilityCardinality-08 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m21.996sec

checking: EF [[[~ [49<=Phase2] & 50<=ERKP_MEKPP] & ~ [MEKP_RafP<=51]]]
normalized: E [true U [~ [MEKP_RafP<=51] & [50<=ERKP_MEKPP & ~ [49<=Phase2]]]]

abstracting: (49<=Phase2)
states: 0
abstracting: (50<=ERKP_MEKPP)
states: 0
abstracting: (MEKP_RafP<=51)
states: 5,634,903,909,420,423,840 (18)
-> the formula is FALSE

FORMULA MAPK-PT-00080-ReachabilityCardinality-11 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.275sec

checking: EF [[[31<=ERKP_Phase3 | 10<=MEKP_Phase2] | ERK<=MEKP_RafP]]
normalized: E [true U [ERK<=MEKP_RafP | [31<=ERKP_Phase3 | 10<=MEKP_Phase2]]]

abstracting: (10<=MEKP_Phase2)
states: 896,043,607,068,560,808 (17)
abstracting: (31<=ERKP_Phase3)
states: 223,058,007,857,555,360 (17)
abstracting: (ERK<=MEKP_RafP)
states: 1,689,872,002,054,416,510 (18)
MC time: 4m41.288sec

checking: AG [~ [[~ [[~ [RafP_Phase1<=ERKP_MEKPP] & ERK<=6]] & ERK<=MEKPP]]]
normalized: ~ [E [true U [ERK<=MEKPP & ~ [[ERK<=6 & ~ [RafP_Phase1<=ERKP_MEKPP]]]]]]

abstracting: (RafP_Phase1<=ERKP_MEKPP)
states: 750,666,739,538,312,100 (17)
abstracting: (ERK<=6)
states: 2,359,298,706,652,461,420 (18)
abstracting: (ERK<=MEKPP)
states: 1,867,371,330,764,512,950 (18)

BK_STOP 1679534068800

--------------------
content from stderr:

+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityCardinality -timeout 360 -rebuildPNML
check for maximal unmarked siphon
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.000sec


iterations count:7295 (243), effective:1120 (37)

initing FirstDep: 0m 0.000sec


iterations count:1762 (58), effective:187 (6)

sat_reach.icc:155: Timeout: after 274 sec


sat_reach.icc:155: Timeout: after 253 sec

/home/mcc/BenchKit/bin//../reducer/bin//../../marcie/bin//../BenchKit_head.sh: line 16: 452 Killed ${MARCIE} --net-file=model.pnml --mcc-file=${BK_EXAMINATION}.xml ${MARCIE_CONFIG}

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPK-PT-00080"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="marciexred"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool marciexred"
echo " Input is MAPK-PT-00080, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r234-tall-167856420500574"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPK-PT-00080.tgz
mv MAPK-PT-00080 execution
cd execution
if [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "UpperBounds" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] || [ "ReachabilityCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;