Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r229-tall-167856413700743.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..........................................................................................................
=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is Medical-PT-24, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r229-tall-167856413700743
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 3.6M
-rw-r--r-- 1 mcc users 7.4K Feb 25 14:32 CTLCardinality.txt
-rw-r--r-- 1 mcc users 74K Feb 25 14:32 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.8K Feb 25 14:29 CTLFireability.txt
-rw-r--r-- 1 mcc users 53K Feb 25 14:29 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K Feb 25 16:23 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Feb 25 16:23 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Feb 25 16:23 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Feb 25 16:23 LTLFireability.xml
-rw-r--r-- 1 mcc users 12K Feb 25 14:38 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 110K Feb 25 14:38 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 11K Feb 25 14:35 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 92K Feb 25 14:35 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Feb 25 16:23 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Feb 25 16:23 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 3 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 3.1M Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Medical-PT-24-ReachabilityFireability-00
FORMULA_NAME Medical-PT-24-ReachabilityFireability-01
FORMULA_NAME Medical-PT-24-ReachabilityFireability-02
FORMULA_NAME Medical-PT-24-ReachabilityFireability-03
FORMULA_NAME Medical-PT-24-ReachabilityFireability-04
FORMULA_NAME Medical-PT-24-ReachabilityFireability-05
FORMULA_NAME Medical-PT-24-ReachabilityFireability-06
FORMULA_NAME Medical-PT-24-ReachabilityFireability-07
FORMULA_NAME Medical-PT-24-ReachabilityFireability-08
FORMULA_NAME Medical-PT-24-ReachabilityFireability-09
FORMULA_NAME Medical-PT-24-ReachabilityFireability-10
FORMULA_NAME Medical-PT-24-ReachabilityFireability-11
FORMULA_NAME Medical-PT-24-ReachabilityFireability-12
FORMULA_NAME Medical-PT-24-ReachabilityFireability-13
FORMULA_NAME Medical-PT-24-ReachabilityFireability-14
FORMULA_NAME Medical-PT-24-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1679548815988

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityFireability
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Medical-PT-24
Not applying reductions.
Model is PT
ReachabilityFireability PT
Running Version 202303021504
[2023-03-23 05:20:17] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityFireability, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-23 05:20:17] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-23 05:20:17] [INFO ] Load time of PNML (sax parser for PT used): 240 ms
[2023-03-23 05:20:17] [INFO ] Transformed 312 places.
[2023-03-23 05:20:17] [INFO ] Transformed 5431 transitions.
[2023-03-23 05:20:17] [INFO ] Parsed PT model containing 312 places and 5431 transitions and 28790 arcs in 338 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityFireability.xml in 24 ms.
Working with output stream class java.io.PrintStream
Deduced a syphon composed of 242 places in 18 ms
Reduce places removed 242 places and 5204 transitions.
Reduce places removed 1 places and 0 transitions.
FORMULA Medical-PT-24-ReachabilityFireability-00 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-02 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-03 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-04 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-05 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-06 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-07 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-08 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-09 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-10 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-11 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-12 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-13 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-14 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-24-ReachabilityFireability-15 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Incomplete random walk after 10000 steps, including 30 resets, run finished after 81 ms. (steps per millisecond=123 ) properties (out of 1) seen :0
Incomplete Best-First random walk after 10000 steps, including 6 resets, run finished after 36 ms. (steps per millisecond=277 ) properties (out of 1) seen :0
[2023-03-23 05:20:18] [INFO ] Flatten gal took : 68 ms
[2023-03-23 05:20:18] [INFO ] Flatten gal took : 28 ms
[2023-03-23 05:20:18] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality7999395819726227389.gal : 20 ms
[2023-03-23 05:20:18] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality10385273860647963522.prop : 4 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality7999395819726227389.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality10385273860647963522.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality10385273860647963522.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 4
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :4 after 10
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :10 after 35
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :35 after 120
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :120 after 560
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :560 after 2925
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :2925 after 1.04032e+06
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :1.04032e+06 after 4.04722e+06
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :4.04722e+06 after 1.00493e+07
Interrupted probabilistic random walk after 1110002 steps, run timeout after 3003 ms. (steps per millisecond=369 ) properties seen :{}
Probabilistic random walk after 1110002 steps, saw 709099 distinct states, run finished after 3004 ms. (steps per millisecond=369 ) properties seen :0
Running SMT prover for 1 properties.
[2023-03-23 05:20:21] [INFO ] Flow matrix only has 182 transitions (discarded 45 similar events)
// Phase 1: matrix 182 rows 69 cols
[2023-03-23 05:20:21] [INFO ] Computed 10 place invariants in 18 ms
[2023-03-23 05:20:21] [INFO ] [Real]Absence check using 10 positive place invariants in 5 ms returned sat
[2023-03-23 05:20:21] [INFO ] After 203ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:1
[2023-03-23 05:20:21] [INFO ] [Nat]Absence check using 10 positive place invariants in 2 ms returned sat
[2023-03-23 05:20:21] [INFO ] After 44ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :1
[2023-03-23 05:20:21] [INFO ] State equation strengthened by 56 read => feed constraints.
[2023-03-23 05:20:21] [INFO ] After 15ms SMT Verify possible using 56 Read/Feed constraints in natural domain returned unsat :0 sat :1
[2023-03-23 05:20:21] [INFO ] Deduced a trap composed of 11 places in 71 ms of which 2 ms to minimize.
[2023-03-23 05:20:21] [INFO ] Deduced a trap composed of 5 places in 64 ms of which 1 ms to minimize.
[2023-03-23 05:20:21] [INFO ] Deduced a trap composed of 5 places in 56 ms of which 1 ms to minimize.
[2023-03-23 05:20:21] [INFO ] Deduced a trap composed of 5 places in 45 ms of which 0 ms to minimize.
[2023-03-23 05:20:21] [INFO ] Deduced a trap composed of 22 places in 58 ms of which 0 ms to minimize.
[2023-03-23 05:20:21] [INFO ] Deduced a trap composed of 29 places in 40 ms of which 0 ms to minimize.
[2023-03-23 05:20:21] [INFO ] Deduced a trap composed of 32 places in 40 ms of which 0 ms to minimize.
[2023-03-23 05:20:21] [INFO ] Trap strengthening (SAT) tested/added 8/7 trap constraints in 427 ms
[2023-03-23 05:20:21] [INFO ] After 448ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :1
Attempting to minimize the solution found.
Minimization took 6 ms.
[2023-03-23 05:20:21] [INFO ] After 549ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :1
Parikh walk visited 0 properties in 2 ms.
Support contains 3 out of 69 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 69/69 places, 227/227 transitions.
Graph (complete) has 347 edges and 69 vertex of which 67 are kept as prefixes of interest. Removing 2 places using SCC suffix rule.1 ms
Discarding 2 places :
Also discarding 0 output transitions
Performed 2 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 2 Pre rules applied. Total rules applied 1 place count 67 transition count 225
Deduced a syphon composed of 2 places in 1 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 4 rules applied. Total rules applied 5 place count 65 transition count 225
Performed 1 Post agglomeration using F-continuation condition.Transition count delta: 0
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 0 with 2 rules applied. Total rules applied 7 place count 64 transition count 225
Free-agglomeration rule applied 2 times.
Iterating global reduction 0 with 2 rules applied. Total rules applied 9 place count 64 transition count 223
Reduce places removed 2 places and 0 transitions.
Iterating post reduction 0 with 2 rules applied. Total rules applied 11 place count 62 transition count 223
Applied a total of 11 rules in 40 ms. Remains 62 /69 variables (removed 7) and now considering 223/227 (removed 4) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 40 ms. Remains : 62/69 places, 223/227 transitions.
Incomplete random walk after 10000 steps, including 2 resets, run finished after 9 ms. (steps per millisecond=1111 ) properties (out of 1) seen :0
Incomplete Best-First random walk after 10000 steps, including 2 resets, run finished after 12 ms. (steps per millisecond=833 ) properties (out of 1) seen :0
Interrupted probabilistic random walk after 1269990 steps, run timeout after 3001 ms. (steps per millisecond=423 ) properties seen :{}
Probabilistic random walk after 1269990 steps, saw 722920 distinct states, run finished after 3001 ms. (steps per millisecond=423 ) properties seen :0
Running SMT prover for 1 properties.
[2023-03-23 05:20:24] [INFO ] Flow matrix only has 177 transitions (discarded 46 similar events)
// Phase 1: matrix 177 rows 62 cols
[2023-03-23 05:20:24] [INFO ] Computed 8 place invariants in 4 ms
[2023-03-23 05:20:24] [INFO ] [Real]Absence check using 8 positive place invariants in 2 ms returned sat
[2023-03-23 05:20:25] [INFO ] After 96ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:1
[2023-03-23 05:20:25] [INFO ] [Nat]Absence check using 8 positive place invariants in 2 ms returned sat
[2023-03-23 05:20:25] [INFO ] After 53ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :1
[2023-03-23 05:20:25] [INFO ] State equation strengthened by 57 read => feed constraints.
[2023-03-23 05:20:25] [INFO ] After 12ms SMT Verify possible using 57 Read/Feed constraints in natural domain returned unsat :0 sat :1
[2023-03-23 05:20:25] [INFO ] Deduced a trap composed of 13 places in 68 ms of which 0 ms to minimize.
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :1.00493e+07 after 2.20418e+07
[2023-03-23 05:20:25] [INFO ] Deduced a trap composed of 6 places in 56 ms of which 0 ms to minimize.
[2023-03-23 05:20:25] [INFO ] Deduced a trap composed of 30 places in 68 ms of which 0 ms to minimize.
[2023-03-23 05:20:25] [INFO ] Trap strengthening (SAT) tested/added 4/3 trap constraints in 216 ms
[2023-03-23 05:20:25] [INFO ] After 235ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :1
Attempting to minimize the solution found.
Minimization took 9 ms.
[2023-03-23 05:20:25] [INFO ] After 332ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :1
Parikh walk visited 0 properties in 0 ms.
Support contains 3 out of 62 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 62/62 places, 223/223 transitions.
Applied a total of 0 rules in 7 ms. Remains 62 /62 variables (removed 0) and now considering 223/223 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 7 ms. Remains : 62/62 places, 223/223 transitions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 62/62 places, 223/223 transitions.
Applied a total of 0 rules in 6 ms. Remains 62 /62 variables (removed 0) and now considering 223/223 (removed 0) transitions.
[2023-03-23 05:20:25] [INFO ] Flow matrix only has 177 transitions (discarded 46 similar events)
[2023-03-23 05:20:25] [INFO ] Invariant cache hit.
[2023-03-23 05:20:25] [INFO ] Implicit Places using invariants in 66 ms returned []
[2023-03-23 05:20:25] [INFO ] Flow matrix only has 177 transitions (discarded 46 similar events)
[2023-03-23 05:20:25] [INFO ] Invariant cache hit.
[2023-03-23 05:20:25] [INFO ] State equation strengthened by 57 read => feed constraints.
[2023-03-23 05:20:25] [INFO ] Implicit Places using invariants and state equation in 126 ms returned []
Implicit Place search using SMT with State Equation took 194 ms to find 0 implicit places.
[2023-03-23 05:20:25] [INFO ] Redundant transitions in 6 ms returned []
[2023-03-23 05:20:25] [INFO ] Flow matrix only has 177 transitions (discarded 46 similar events)
[2023-03-23 05:20:25] [INFO ] Invariant cache hit.
[2023-03-23 05:20:25] [INFO ] Dead Transitions using invariants and state equation in 93 ms found 0 transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 308 ms. Remains : 62/62 places, 223/223 transitions.
Drop transitions removed 13 transitions
Ensure Unique test removed 39 transitions
Reduce isomorphic transitions removed 52 transitions.
Iterating post reduction 0 with 52 rules applied. Total rules applied 52 place count 62 transition count 171
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 1 with 1 Pre rules applied. Total rules applied 52 place count 62 transition count 170
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 1 with 2 rules applied. Total rules applied 54 place count 61 transition count 170
Performed 2 Post agglomeration using F-continuation condition.Transition count delta: -31
Deduced a syphon composed of 2 places in 0 ms
Reduce places removed 3 places and 0 transitions.
Iterating global reduction 1 with 5 rules applied. Total rules applied 59 place count 58 transition count 201
Free-agglomeration rule applied 2 times.
Iterating global reduction 1 with 2 rules applied. Total rules applied 61 place count 58 transition count 199
Reduce places removed 2 places and 0 transitions.
Iterating post reduction 1 with 2 rules applied. Total rules applied 63 place count 56 transition count 199
Free-agglomeration rule (complex) applied 1 times.
Iterating global reduction 2 with 1 rules applied. Total rules applied 64 place count 56 transition count 222
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 2 with 1 rules applied. Total rules applied 65 place count 55 transition count 222
Applied a total of 65 rules in 52 ms. Remains 55 /62 variables (removed 7) and now considering 222/223 (removed 1) transitions.
Running SMT prover for 1 properties.
// Phase 1: matrix 222 rows 55 cols
[2023-03-23 05:20:25] [INFO ] Computed 9 place invariants in 5 ms
[2023-03-23 05:20:25] [INFO ] [Real]Absence check using 9 positive place invariants in 1 ms returned sat
[2023-03-23 05:20:25] [INFO ] After 60ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:1
[2023-03-23 05:20:25] [INFO ] [Nat]Absence check using 9 positive place invariants in 2 ms returned sat
[2023-03-23 05:20:25] [INFO ] After 50ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :1
[2023-03-23 05:20:25] [INFO ] State equation strengthened by 7 read => feed constraints.
[2023-03-23 05:20:25] [INFO ] After 15ms SMT Verify possible using 7 Read/Feed constraints in natural domain returned unsat :0 sat :1
[2023-03-23 05:20:25] [INFO ] After 37ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :1
Attempting to minimize the solution found.
Minimization took 15 ms.
[2023-03-23 05:20:25] [INFO ] After 147ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :1
[2023-03-23 05:20:25] [INFO ] Flatten gal took : 20 ms
[2023-03-23 05:20:26] [INFO ] Flatten gal took : 20 ms
[2023-03-23 05:20:26] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality14083281929969464573.gal : 4 ms
[2023-03-23 05:20:26] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality13184616728618895319.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality14083281929969464573.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality13184616728618895319.prop' '--nowitness' '--gen-order' 'FOLLOW'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...330
Loading property file /tmp/ReachabilityCardinality13184616728618895319.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 9
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :9 after 19
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :19 after 37
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :37 after 71
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :71 after 137
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :137 after 267
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :267 after 525
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :525 after 1039
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :1039 after 2065
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :2065 after 4115
Detected timeout of ITS tools.
[2023-03-23 05:20:41] [INFO ] Flatten gal took : 19 ms
[2023-03-23 05:20:41] [INFO ] Applying decomposition
[2023-03-23 05:20:41] [INFO ] Flatten gal took : 15 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph5807834906863588794.txt' '-o' '/tmp/graph5807834906863588794.bin' '-w' '/tmp/graph5807834906863588794.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph5807834906863588794.bin' '-l' '-1' '-v' '-w' '/tmp/graph5807834906863588794.weights' '-q' '0' '-e' '0.001'
[2023-03-23 05:20:41] [INFO ] Decomposing Gal with order
[2023-03-23 05:20:41] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-23 05:20:41] [INFO ] Removed a total of 84 redundant transitions.
[2023-03-23 05:20:41] [INFO ] Flatten gal took : 49 ms
[2023-03-23 05:20:41] [INFO ] Fuse similar labels procedure discarded/fused a total of 76 labels/synchronizations in 4 ms.
[2023-03-23 05:20:41] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality13374354778028205231.gal : 3 ms
[2023-03-23 05:20:41] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality6753783369857079132.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality13374354778028205231.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality6753783369857079132.prop' '--nowitness'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...308
Loading property file /tmp/ReachabilityCardinality6753783369857079132.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 1
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :1 after 2
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :2 after 2
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :2 after 10
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :10 after 76
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :76 after 206
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :206 after 464
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :464 after 978
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :978 after 2004
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :2004 after 4054
SDD proceeding with computation,1 properties remain. new max is 4096
SDD size :4054 after 8152
Detected timeout of ITS tools.
Built C files in :
/tmp/ltsmin9780079255069396295
[2023-03-23 05:20:56] [INFO ] Built C files in 12ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin9780079255069396295
Running compilation step : cd /tmp/ltsmin9780079255069396295;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/limit_time.pl' '3' 'gcc' '-c' '-I/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/include/' '-I.' '-std=c99' '-fPIC' '-O0' 'model.c'
Compilation finished in 462 ms.
Running link step : cd /tmp/ltsmin9780079255069396295;'gcc' '-shared' '-o' 'gal.so' 'model.o'
Link finished in 42 ms.
Running LTSmin : cd /tmp/ltsmin9780079255069396295;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/pins2lts-mc-linux64' './gal.so' '--threads=8' '--when' '-i' 'MedicalPT24ReachabilityFireability01==true'
SDD proceeding with computation,1 properties remain. new max is 4096
SDD size :2.20418e+07 after 4.60151e+07
LTSmin run took 6299 ms.
Found Violation
ITS runner failed with exception null
java.lang.InterruptedException
at java.base/java.lang.Object.wait(Native Method)
at java.base/java.lang.Thread.join(Thread.java:1304)
at java.base/java.lang.Thread.join(Thread.java:1372)
at fr.lip6.move.gal.application.runner.AbstractRunner.join(AbstractRunner.java:27)
at fr.lip6.move.gal.application.runner.its.ITSRunner.join(ITSRunner.java:177)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.verifyWithSDD(GlobalPropertySolver.java:675)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.lambda$2(ReachabilitySolver.java:63)
at java.base/java.lang.Thread.run(Thread.java:833)
[2023-03-23 05:21:03] [INFO ] Flatten gal took : 19 ms
[2023-03-23 05:21:03] [INFO ] Applying decomposition
[2023-03-23 05:21:03] [INFO ] Flatten gal took : 17 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph2691819925781900213.txt' '-o' '/tmp/graph2691819925781900213.bin' '-w' '/tmp/graph2691819925781900213.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph2691819925781900213.bin' '-l' '-1' '-v' '-w' '/tmp/graph2691819925781900213.weights' '-q' '0' '-e' '0.001'
[2023-03-23 05:21:03] [INFO ] Decomposing Gal with order
[2023-03-23 05:21:03] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-23 05:21:03] [INFO ] Removed a total of 94 redundant transitions.
[2023-03-23 05:21:03] [INFO ] Flatten gal took : 28 ms
[2023-03-23 05:21:03] [INFO ] Fuse similar labels procedure discarded/fused a total of 83 labels/synchronizations in 3 ms.
[2023-03-23 05:21:03] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality8329767901667297675.gal : 2 ms
[2023-03-23 05:21:03] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality1535050747108644250.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality8329767901667297675.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality1535050747108644250.prop' '--nowitness'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...307
Loading property file /tmp/ReachabilityCardinality1535050747108644250.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 2
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :2 after 10
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :10 after 20
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :20 after 72
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :72 after 240
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :240 after 5410
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :5410 after 11668
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :11668 after 29250
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :29250 after 29250
SDD proceeding with computation,1 properties remain. new max is 8192
SDD size :4.60151e+07 after 9.395e+07
SDD proceeding with computation,1 properties remain. new max is 16384
SDD size :9.395e+07 after 1.89422e+08
Detected timeout of ITS tools.
Detected timeout of ITS tools.
[2023-03-23 05:51:04] [INFO ] Flatten gal took : 220 ms
Using solver Z3 to compute partial order matrices.
Built C files in :
/tmp/ltsmin17154921849442683659
[2023-03-23 05:51:04] [INFO ] Computing symmetric may disable matrix : 223 transitions.
[2023-03-23 05:51:04] [INFO ] Computation of Complete disable matrix. took 27 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2023-03-23 05:51:04] [INFO ] Computing symmetric may enable matrix : 223 transitions.
[2023-03-23 05:51:04] [INFO ] Computation of Complete enable matrix. took 10 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2023-03-23 05:51:04] [INFO ] Applying decomposition
[2023-03-23 05:51:04] [INFO ] Computing Do-Not-Accords matrix : 223 transitions.
[2023-03-23 05:51:04] [INFO ] Computation of Completed DNA matrix. took 7 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2023-03-23 05:51:04] [INFO ] Built C files in 295ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin17154921849442683659
[2023-03-23 05:51:05] [INFO ] Flatten gal took : 98 ms
Running compilation step : cd /tmp/ltsmin17154921849442683659;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/limit_time.pl' '720' 'gcc' '-c' '-I/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/include/' '-I.' '-std=c99' '-fPIC' '-O0' 'model.c'
Compilation finished in 1496 ms.
Running link step : cd /tmp/ltsmin17154921849442683659;'gcc' '-shared' '-o' 'gal.so' 'model.o'
Link finished in 205 ms.
Running LTSmin : cd /tmp/ltsmin17154921849442683659;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/pins2lts-mc-linux64' './gal.so' '--threads=8' '-p' '--pins-guards' '--when' '-i' 'MedicalPT24ReachabilityFireability01==true'
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph9281660132206648727.txt' '-o' '/tmp/graph9281660132206648727.bin' '-w' '/tmp/graph9281660132206648727.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph9281660132206648727.bin' '-l' '-1' '-v' '-w' '/tmp/graph9281660132206648727.weights' '-q' '0' '-e' '0.001'
[2023-03-23 05:51:06] [INFO ] Decomposing Gal with order
[2023-03-23 05:51:06] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-23 05:51:06] [INFO ] Removed a total of 83 redundant transitions.
[2023-03-23 05:51:06] [INFO ] Flatten gal took : 76 ms
[2023-03-23 05:51:06] [INFO ] Fuse similar labels procedure discarded/fused a total of 73 labels/synchronizations in 21 ms.
[2023-03-23 05:51:06] [INFO ] Time to serialize gal into /tmp/ReachabilityFireability12830240127915087086.gal : 20 ms
[2023-03-23 05:51:06] [INFO ] Time to serialize properties into /tmp/ReachabilityFireability1759979317164503050.prop : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityFireability12830240127915087086.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityFireability1759979317164503050.prop' '--nowitness'

its-reach command run as :

/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...308
Loading property file /tmp/ReachabilityFireability1759979317164503050.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 5
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :5 after 10
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :10 after 19
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :19 after 73
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :73 after 172
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :172 after 397
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :397 after 772
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :772 after 1522
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :1522 after 2947
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :2947 after 5797
SDD proceeding with computation,1 properties remain. new max is 4096
SDD size :5797 after 11497
SDD proceeding with computation,1 properties remain. new max is 8192
SDD size :11497 after 22897
SDD proceeding with computation,1 properties remain. new max is 16384
SDD size :22897 after 45697
SDD proceeding with computation,1 properties remain. new max is 32768
SDD size :45697 after 91222
SDD proceeding with computation,1 properties remain. new max is 65536
SDD size :91222 after 182272
SDD proceeding with computation,1 properties remain. new max is 131072
SDD size :182272 after 364372
TIME LIMIT: Killed by timeout after 3600 seconds
MemTotal: 16393216 kB
MemFree: 11611232 kB
After kill :
MemTotal: 16393216 kB
MemFree: 15799400 kB

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityFireability = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityFireability -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Medical-PT-24"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is Medical-PT-24, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r229-tall-167856413700743"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Medical-PT-24.tgz
mv Medical-PT-24 execution
cd execution
if [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "UpperBounds" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] || [ "ReachabilityFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;