About the Execution of ITS-Tools for Medical-PT-02
| Execution Summary | |||||
| Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
| 12653.468 | 3600000.00 | 10702735.00 | 3622.30 | TTFFFFFTTFT?TTTT | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Formatting '/data/fkordon/mcc2023-input.r229-tall-167856413600654.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool itstools
Input is Medical-PT-02, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r229-tall-167856413600654
=====================================================================
--------------------
preparation of the directory to be used:
/home/mcc/execution
total 3.5M
-rw-r--r-- 1 mcc users 12K Feb 25 14:41 CTLCardinality.txt
-rw-r--r-- 1 mcc users 125K Feb 25 14:41 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.0K Feb 25 14:38 CTLFireability.txt
-rw-r--r-- 1 mcc users 57K Feb 25 14:38 CTLFireability.xml
-rw-r--r-- 1 mcc users 3.6K Feb 25 16:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 23K Feb 25 16:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Feb 25 16:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 18K Feb 25 16:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 8.6K Feb 25 14:45 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 77K Feb 25 14:45 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 4.9K Feb 25 14:43 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 33K Feb 25 14:43 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K Feb 25 16:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Feb 25 16:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 3 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 3.1M Mar 5 18:22 model.pnml
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content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-00
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-01
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-02
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-03
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-04
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-05
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-06
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-07
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-08
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-09
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-10
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-11
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-12
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-13
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-14
FORMULA_NAME Medical-PT-02-ReachabilityCardinality-15
=== Now, execution of the tool begins
BK_START 1679522585062
bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=itstools
BK_EXAMINATION=ReachabilityCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Medical-PT-02
Not applying reductions.
Model is PT
ReachabilityCardinality PT
Running Version 202303021504
[2023-03-22 22:03:06] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 3600]
[2023-03-22 22:03:06] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-22 22:03:06] [INFO ] Load time of PNML (sax parser for PT used): 245 ms
[2023-03-22 22:03:06] [INFO ] Transformed 312 places.
[2023-03-22 22:03:06] [INFO ] Transformed 5431 transitions.
[2023-03-22 22:03:06] [INFO ] Parsed PT model containing 312 places and 5431 transitions and 28790 arcs in 346 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityCardinality.xml in 14 ms.
Working with output stream class java.io.PrintStream
Deduced a syphon composed of 242 places in 18 ms
Reduce places removed 242 places and 5204 transitions.
Reduce places removed 1 places and 0 transitions.
FORMULA Medical-PT-02-ReachabilityCardinality-00 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-01 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-02 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-03 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-05 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-06 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-07 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-08 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-09 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-10 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-12 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-13 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-14 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Medical-PT-02-ReachabilityCardinality-15 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Incomplete random walk after 10000 steps, including 75 resets, run finished after 218 ms. (steps per millisecond=45 ) properties (out of 2) seen :0
Incomplete Best-First random walk after 10001 steps, including 23 resets, run finished after 44 ms. (steps per millisecond=227 ) properties (out of 2) seen :0
Incomplete Best-First random walk after 10001 steps, including 24 resets, run finished after 41 ms. (steps per millisecond=243 ) properties (out of 2) seen :0
[2023-03-22 22:03:07] [INFO ] Flatten gal took : 61 ms
[2023-03-22 22:03:07] [INFO ] Flatten gal took : 23 ms
[2023-03-22 22:03:07] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality13454563640971094256.gal : 30 ms
[2023-03-22 22:03:07] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality1567868952755064361.prop : 1 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality13454563640971094256.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality1567868952755064361.prop' '--nowitness' '--gen-order' 'FOLLOW'
its-reach command run as :
/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality1567868952755064361.prop.
SDD proceeding with computation,2 properties remain. new max is 4
SDD size :1 after 4
SDD proceeding with computation,2 properties remain. new max is 8
SDD size :4 after 10
SDD proceeding with computation,2 properties remain. new max is 16
SDD size :10 after 34
SDD proceeding with computation,2 properties remain. new max is 32
SDD size :34 after 40
SDD proceeding with computation,2 properties remain. new max is 64
SDD size :40 after 542
SDD proceeding with computation,2 properties remain. new max is 128
SDD size :542 after 3142
SDD proceeding with computation,2 properties remain. new max is 256
SDD size :3142 after 8302
SDD proceeding with computation,2 properties remain. new max is 512
SDD size :8302 after 18582
SDD proceeding with computation,2 properties remain. new max is 1024
SDD size :18582 after 39102
Interrupted probabilistic random walk after 301822 steps, run timeout after 3001 ms. (steps per millisecond=100 ) properties seen :{}
Probabilistic random walk after 301822 steps, saw 184565 distinct states, run finished after 3003 ms. (steps per millisecond=100 ) properties seen :0
Running SMT prover for 2 properties.
[2023-03-22 22:03:10] [INFO ] Flow matrix only has 182 transitions (discarded 45 similar events)
// Phase 1: matrix 182 rows 69 cols
[2023-03-22 22:03:10] [INFO ] Computed 10 place invariants in 14 ms
[2023-03-22 22:03:10] [INFO ] [Real]Absence check using 10 positive place invariants in 7 ms returned sat
[2023-03-22 22:03:10] [INFO ] After 120ms SMT Verify possible using state equation in real domain returned unsat :1 sat :1
[2023-03-22 22:03:10] [INFO ] State equation strengthened by 56 read => feed constraints.
[2023-03-22 22:03:10] [INFO ] After 54ms SMT Verify possible using 56 Read/Feed constraints in real domain returned unsat :1 sat :0 real:1
[2023-03-22 22:03:10] [INFO ] After 483ms SMT Verify possible using all constraints in real domain returned unsat :1 sat :0 real:1
[2023-03-22 22:03:10] [INFO ] [Nat]Absence check using 10 positive place invariants in 24 ms returned sat
[2023-03-22 22:03:11] [INFO ] After 136ms SMT Verify possible using state equation in natural domain returned unsat :1 sat :1
[2023-03-22 22:03:11] [INFO ] After 111ms SMT Verify possible using 56 Read/Feed constraints in natural domain returned unsat :1 sat :1
[2023-03-22 22:03:11] [INFO ] Deduced a trap composed of 6 places in 240 ms of which 94 ms to minimize.
[2023-03-22 22:03:11] [INFO ] Trap strengthening (SAT) tested/added 2/1 trap constraints in 296 ms
[2023-03-22 22:03:11] [INFO ] After 441ms SMT Verify possible using trap constraints in natural domain returned unsat :1 sat :1
Attempting to minimize the solution found.
Minimization took 60 ms.
[2023-03-22 22:03:11] [INFO ] After 753ms SMT Verify possible using all constraints in natural domain returned unsat :1 sat :1
FORMULA Medical-PT-02-ReachabilityCardinality-04 FALSE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
Fused 2 Parikh solutions to 1 different solutions.
Parikh walk visited 0 properties in 3 ms.
Support contains 1 out of 69 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 69/69 places, 227/227 transitions.
Graph (complete) has 347 edges and 69 vertex of which 67 are kept as prefixes of interest. Removing 2 places using SCC suffix rule.3 ms
Discarding 2 places :
Also discarding 0 output transitions
Performed 3 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 3 Pre rules applied. Total rules applied 1 place count 67 transition count 224
Deduced a syphon composed of 3 places in 1 ms
Reduce places removed 3 places and 0 transitions.
Iterating global reduction 0 with 6 rules applied. Total rules applied 7 place count 64 transition count 224
Performed 1 Post agglomeration using F-continuation condition.Transition count delta: 0
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 0 with 2 rules applied. Total rules applied 9 place count 63 transition count 224
Free-agglomeration rule applied 2 times.
Iterating global reduction 0 with 2 rules applied. Total rules applied 11 place count 63 transition count 222
Reduce places removed 2 places and 0 transitions.
Iterating post reduction 0 with 2 rules applied. Total rules applied 13 place count 61 transition count 222
Applied a total of 13 rules in 90 ms. Remains 61 /69 variables (removed 8) and now considering 222/227 (removed 5) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 90 ms. Remains : 61/69 places, 222/227 transitions.
Incomplete random walk after 10000 steps, including 2 resets, run finished after 32 ms. (steps per millisecond=312 ) properties (out of 1) seen :0
Incomplete Best-First random walk after 10000 steps, including 2 resets, run finished after 12 ms. (steps per millisecond=833 ) properties (out of 1) seen :0
Interrupted probabilistic random walk after 1288296 steps, run timeout after 3001 ms. (steps per millisecond=429 ) properties seen :{}
Probabilistic random walk after 1288296 steps, saw 734312 distinct states, run finished after 3001 ms. (steps per millisecond=429 ) properties seen :0
Running SMT prover for 1 properties.
[2023-03-22 22:03:14] [INFO ] Flow matrix only has 176 transitions (discarded 46 similar events)
// Phase 1: matrix 176 rows 61 cols
[2023-03-22 22:03:14] [INFO ] Computed 8 place invariants in 6 ms
[2023-03-22 22:03:14] [INFO ] [Real]Absence check using 8 positive place invariants in 1 ms returned sat
[2023-03-22 22:03:14] [INFO ] After 38ms SMT Verify possible using state equation in real domain returned unsat :0 sat :1
[2023-03-22 22:03:14] [INFO ] State equation strengthened by 57 read => feed constraints.
[2023-03-22 22:03:14] [INFO ] After 15ms SMT Verify possible using 57 Read/Feed constraints in real domain returned unsat :0 sat :0 real:1
[2023-03-22 22:03:14] [INFO ] After 84ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:1
[2023-03-22 22:03:14] [INFO ] [Nat]Absence check using 8 positive place invariants in 1 ms returned sat
[2023-03-22 22:03:14] [INFO ] After 51ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :1
[2023-03-22 22:03:14] [INFO ] After 22ms SMT Verify possible using 57 Read/Feed constraints in natural domain returned unsat :0 sat :1
[2023-03-22 22:03:15] [INFO ] Deduced a trap composed of 6 places in 51 ms of which 0 ms to minimize.
[2023-03-22 22:03:15] [INFO ] Trap strengthening (SAT) tested/added 2/1 trap constraints in 66 ms
[2023-03-22 22:03:15] [INFO ] After 92ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :1
Attempting to minimize the solution found.
Minimization took 5 ms.
[2023-03-22 22:03:15] [INFO ] After 180ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :1
Parikh walk visited 0 properties in 1 ms.
Support contains 1 out of 61 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 61/61 places, 222/222 transitions.
Applied a total of 0 rules in 7 ms. Remains 61 /61 variables (removed 0) and now considering 222/222 (removed 0) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 7 ms. Remains : 61/61 places, 222/222 transitions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 61/61 places, 222/222 transitions.
Applied a total of 0 rules in 6 ms. Remains 61 /61 variables (removed 0) and now considering 222/222 (removed 0) transitions.
[2023-03-22 22:03:15] [INFO ] Flow matrix only has 176 transitions (discarded 46 similar events)
[2023-03-22 22:03:15] [INFO ] Invariant cache hit.
[2023-03-22 22:03:15] [INFO ] Implicit Places using invariants in 79 ms returned []
[2023-03-22 22:03:15] [INFO ] Flow matrix only has 176 transitions (discarded 46 similar events)
[2023-03-22 22:03:15] [INFO ] Invariant cache hit.
[2023-03-22 22:03:15] [INFO ] State equation strengthened by 57 read => feed constraints.
[2023-03-22 22:03:15] [INFO ] Implicit Places using invariants and state equation in 133 ms returned []
Implicit Place search using SMT with State Equation took 213 ms to find 0 implicit places.
[2023-03-22 22:03:15] [INFO ] Redundant transitions in 7 ms returned []
[2023-03-22 22:03:15] [INFO ] Flow matrix only has 176 transitions (discarded 46 similar events)
[2023-03-22 22:03:15] [INFO ] Invariant cache hit.
[2023-03-22 22:03:15] [INFO ] Dead Transitions using invariants and state equation in 109 ms found 0 transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 341 ms. Remains : 61/61 places, 222/222 transitions.
Drop transitions removed 13 transitions
Ensure Unique test removed 39 transitions
Reduce isomorphic transitions removed 52 transitions.
Iterating post reduction 0 with 52 rules applied. Total rules applied 52 place count 61 transition count 170
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 1 with 1 Pre rules applied. Total rules applied 52 place count 61 transition count 169
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 1 with 2 rules applied. Total rules applied 54 place count 60 transition count 169
Performed 1 Post agglomeration using F-continuation condition.Transition count delta: 1
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 1 places and 0 transitions.
Iterating global reduction 1 with 2 rules applied. Total rules applied 56 place count 59 transition count 168
Performed 2 Post agglomeration using F-continuation condition.Transition count delta: -31
Deduced a syphon composed of 2 places in 0 ms
Reduce places removed 3 places and 0 transitions.
Iterating global reduction 1 with 5 rules applied. Total rules applied 61 place count 56 transition count 199
Free-agglomeration rule applied 1 times.
Iterating global reduction 1 with 1 rules applied. Total rules applied 62 place count 56 transition count 198
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 1 with 1 rules applied. Total rules applied 63 place count 55 transition count 198
Free-agglomeration rule (complex) applied 1 times.
Iterating global reduction 2 with 1 rules applied. Total rules applied 64 place count 55 transition count 221
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 2 with 1 rules applied. Total rules applied 65 place count 54 transition count 221
Applied a total of 65 rules in 22 ms. Remains 54 /61 variables (removed 7) and now considering 221/222 (removed 1) transitions.
Running SMT prover for 1 properties.
// Phase 1: matrix 221 rows 54 cols
[2023-03-22 22:03:15] [INFO ] Computed 9 place invariants in 18 ms
[2023-03-22 22:03:15] [INFO ] [Real]Absence check using 9 positive place invariants in 2 ms returned sat
[2023-03-22 22:03:15] [INFO ] After 35ms SMT Verify possible using state equation in real domain returned unsat :0 sat :1
[2023-03-22 22:03:15] [INFO ] State equation strengthened by 7 read => feed constraints.
[2023-03-22 22:03:15] [INFO ] After 5ms SMT Verify possible using 7 Read/Feed constraints in real domain returned unsat :0 sat :0 real:1
[2023-03-22 22:03:15] [INFO ] After 81ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:1
[2023-03-22 22:03:15] [INFO ] [Nat]Absence check using 9 positive place invariants in 2 ms returned sat
[2023-03-22 22:03:15] [INFO ] After 35ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :1
[2023-03-22 22:03:15] [INFO ] After 5ms SMT Verify possible using 7 Read/Feed constraints in natural domain returned unsat :0 sat :1
[2023-03-22 22:03:15] [INFO ] After 13ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :1
Attempting to minimize the solution found.
Minimization took 5 ms.
[2023-03-22 22:03:15] [INFO ] After 85ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :1
[2023-03-22 22:03:15] [INFO ] Flatten gal took : 17 ms
[2023-03-22 22:03:15] [INFO ] Flatten gal took : 16 ms
[2023-03-22 22:03:15] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality17970394323742991457.gal : 3 ms
[2023-03-22 22:03:15] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality3956957407419476825.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality17970394323742991457.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality3956957407419476825.prop' '--nowitness' '--gen-order' 'FOLLOW'
its-reach command run as :
/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...329
Loading property file /tmp/ReachabilityCardinality3956957407419476825.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 9
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :9 after 19
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :19 after 37
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :37 after 71
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :71 after 137
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :137 after 267
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :267 after 525
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :525 after 1039
SDD proceeding with computation,2 properties remain. new max is 2048
SDD size :39102 after 80102
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :1039 after 2065
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :2065 after 4115
Detected timeout of ITS tools.
[2023-03-22 22:03:30] [INFO ] Flatten gal took : 14 ms
[2023-03-22 22:03:30] [INFO ] Applying decomposition
[2023-03-22 22:03:30] [INFO ] Flatten gal took : 14 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph14365271663467309514.txt' '-o' '/tmp/graph14365271663467309514.bin' '-w' '/tmp/graph14365271663467309514.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph14365271663467309514.bin' '-l' '-1' '-v' '-w' '/tmp/graph14365271663467309514.weights' '-q' '0' '-e' '0.001'
[2023-03-22 22:03:30] [INFO ] Decomposing Gal with order
[2023-03-22 22:03:30] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-22 22:03:31] [INFO ] Removed a total of 102 redundant transitions.
[2023-03-22 22:03:31] [INFO ] Flatten gal took : 153 ms
[2023-03-22 22:03:31] [INFO ] Fuse similar labels procedure discarded/fused a total of 121 labels/synchronizations in 6 ms.
[2023-03-22 22:03:31] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality4516338210496796277.gal : 3 ms
[2023-03-22 22:03:31] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality1408792890198132128.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality4516338210496796277.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality1408792890198132128.prop' '--nowitness'
its-reach command run as :
/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...307
Loading property file /tmp/ReachabilityCardinality1408792890198132128.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 1
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :1 after 1
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :1 after 1
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :1 after 10
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :10 after 43
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :43 after 108
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :108 after 237
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :237 after 494
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :494 after 1007
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :1007 after 2032
SDD proceeding with computation,1 properties remain. new max is 4096
SDD size :2032 after 4081
Detected timeout of ITS tools.
Built C files in :
/tmp/ltsmin3782840370568121019
[2023-03-22 22:03:46] [INFO ] Built C files in 19ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin3782840370568121019
Running compilation step : cd /tmp/ltsmin3782840370568121019;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/limit_time.pl' '3' 'gcc' '-c' '-I/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/include/' '-I.' '-std=c99' '-fPIC' '-O0' 'model.c'
Compilation finished in 689 ms.
Running link step : cd /tmp/ltsmin3782840370568121019;'gcc' '-shared' '-o' 'gal.so' 'model.o'
Link finished in 40 ms.
Running LTSmin : cd /tmp/ltsmin3782840370568121019;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/pins2lts-mc-linux64' './gal.so' '--threads=8' '--when' '-i' 'MedicalPT02ReachabilityCardinality11==true'
LTSmin run took 3152 ms.
Found Violation
ITS runner failed with exception null
java.lang.InterruptedException
at java.base/java.lang.Object.wait(Native Method)
at java.base/java.lang.Thread.join(Thread.java:1304)
at java.base/java.lang.Thread.join(Thread.java:1372)
at fr.lip6.move.gal.application.runner.AbstractRunner.join(AbstractRunner.java:27)
at fr.lip6.move.gal.application.runner.its.ITSRunner.join(ITSRunner.java:177)
at fr.lip6.move.gal.application.solver.global.GlobalPropertySolver.verifyWithSDD(GlobalPropertySolver.java:675)
at fr.lip6.move.gal.application.solver.ReachabilitySolver.lambda$2(ReachabilitySolver.java:63)
at java.base/java.lang.Thread.run(Thread.java:833)
[2023-03-22 22:03:50] [INFO ] Flatten gal took : 16 ms
[2023-03-22 22:03:50] [INFO ] Applying decomposition
[2023-03-22 22:03:50] [INFO ] Flatten gal took : 16 ms
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph7007770382805492904.txt' '-o' '/tmp/graph7007770382805492904.bin' '-w' '/tmp/graph7007770382805492904.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph7007770382805492904.bin' '-l' '-1' '-v' '-w' '/tmp/graph7007770382805492904.weights' '-q' '0' '-e' '0.001'
[2023-03-22 22:03:50] [INFO ] Decomposing Gal with order
[2023-03-22 22:03:50] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-22 22:03:50] [INFO ] Removed a total of 94 redundant transitions.
[2023-03-22 22:03:50] [INFO ] Flatten gal took : 59 ms
[2023-03-22 22:03:50] [INFO ] Fuse similar labels procedure discarded/fused a total of 83 labels/synchronizations in 3 ms.
[2023-03-22 22:03:50] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality7537640837028033043.gal : 17 ms
[2023-03-22 22:03:50] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality15279625031478302560.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality7537640837028033043.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality15279625031478302560.prop' '--nowitness'
its-reach command run as :
/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...308
Loading property file /tmp/ReachabilityCardinality15279625031478302560.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 6
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :6 after 12
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :12 after 34
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :34 after 48
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :48 after 96
SDD proceeding with computation,2 properties remain. new max is 4096
SDD size :80102 after 162062
SDD proceeding with computation,2 properties remain. new max is 8192
SDD size :162062 after 325942
SDD proceeding with computation,2 properties remain. new max is 16384
SDD size :325942 after 652342
Detected timeout of ITS tools.
Detected timeout of ITS tools.
[2023-03-22 22:33:50] [INFO ] Flatten gal took : 36 ms
Using solver Z3 to compute partial order matrices.
Built C files in :
/tmp/ltsmin16566248853723733600
[2023-03-22 22:33:50] [INFO ] Computing symmetric may disable matrix : 222 transitions.
[2023-03-22 22:33:50] [INFO ] Computation of Complete disable matrix. took 5 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2023-03-22 22:33:50] [INFO ] Computing symmetric may enable matrix : 222 transitions.
[2023-03-22 22:33:50] [INFO ] Computation of Complete enable matrix. took 2 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2023-03-22 22:33:50] [INFO ] Applying decomposition
[2023-03-22 22:33:50] [INFO ] Flatten gal took : 13 ms
[2023-03-22 22:33:50] [INFO ] Computing Do-Not-Accords matrix : 222 transitions.
[2023-03-22 22:33:50] [INFO ] Computation of Completed DNA matrix. took 9 ms. Total solver calls (SAT/UNSAT): 0(0/0)
[2023-03-22 22:33:50] [INFO ] Built C files in 44ms conformant to PINS (ltsmin variant)in folder :/tmp/ltsmin16566248853723733600
Running compilation step : cd /tmp/ltsmin16566248853723733600;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/limit_time.pl' '720' 'gcc' '-c' '-I/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/include/' '-I.' '-std=c99' '-fPIC' '-O0' 'model.c'
Converted graph to binary with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/convert-linux64' '-i' '/tmp/graph329265578579447632.txt' '-o' '/tmp/graph329265578579447632.bin' '-w' '/tmp/graph329265578579447632.weights'
Built communities with : '/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.202303021504/bin/louvain-linux64' '/tmp/graph329265578579447632.bin' '-l' '-1' '-v' '-w' '/tmp/graph329265578579447632.weights' '-q' '0' '-e' '0.001'
[2023-03-22 22:33:51] [INFO ] Decomposing Gal with order
[2023-03-22 22:33:51] [INFO ] Rewriting arrays to variables to allow decomposition.
[2023-03-22 22:33:51] [INFO ] Removed a total of 83 redundant transitions.
[2023-03-22 22:33:51] [INFO ] Flatten gal took : 21 ms
[2023-03-22 22:33:51] [INFO ] Fuse similar labels procedure discarded/fused a total of 73 labels/synchronizations in 2 ms.
[2023-03-22 22:33:51] [INFO ] Time to serialize gal into /tmp/ReachabilityCardinality14128402614675516539.gal : 2 ms
[2023-03-22 22:33:51] [INFO ] Time to serialize properties into /tmp/ReachabilityCardinality12614708337564466558.prop : 0 ms
Invoking ITS tools like this :cd /home/mcc/execution;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64' '--gc-threshold' '2000000' '--quiet' '-i' '/tmp/ReachabilityCardinality14128402614675516539.gal' '-t' 'CGAL' '-reachable-file' '/tmp/ReachabilityCardinality12614708337564466558.prop' '--nowitness'
its-reach command run as :
/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.202303021504/bin/its-reach-linux64 --gc-threshold 2000000 --quiet ...309
Loading property file /tmp/ReachabilityCardinality12614708337564466558.prop.
SDD proceeding with computation,1 properties remain. new max is 4
SDD size :1 after 3
SDD proceeding with computation,1 properties remain. new max is 8
SDD size :3 after 5
SDD proceeding with computation,1 properties remain. new max is 16
SDD size :5 after 9
SDD proceeding with computation,1 properties remain. new max is 32
SDD size :9 after 18
SDD proceeding with computation,1 properties remain. new max is 64
SDD size :18 after 36
SDD proceeding with computation,1 properties remain. new max is 128
SDD size :36 after 63
SDD proceeding with computation,1 properties remain. new max is 256
SDD size :63 after 117
SDD proceeding with computation,1 properties remain. new max is 512
SDD size :117 after 225
SDD proceeding with computation,1 properties remain. new max is 1024
SDD size :225 after 441
SDD proceeding with computation,1 properties remain. new max is 2048
SDD size :441 after 864
Compilation finished in 448 ms.
Running link step : cd /tmp/ltsmin16566248853723733600;'gcc' '-shared' '-o' 'gal.so' 'model.o'
Link finished in 35 ms.
Running LTSmin : cd /tmp/ltsmin16566248853723733600;'/home/mcc/BenchKit/itstools/itstools/plugins/fr.lip6.move.gal.ltsmin.binaries_1.0.0.202303021504/bin/pins2lts-mc-linux64' './gal.so' '--threads=8' '-p' '--pins-guards' '--when' '-i' 'MedicalPT02ReachabilityCardinality11==true'
SDD proceeding with computation,1 properties remain. new max is 4096
SDD size :864 after 1710
SDD proceeding with computation,1 properties remain. new max is 8192
SDD size :1710 after 3393
SDD proceeding with computation,1 properties remain. new max is 16384
SDD size :3393 after 6750
SDD proceeding with computation,1 properties remain. new max is 32768
SDD size :6750 after 13455
SDD proceeding with computation,1 properties remain. new max is 65536
SDD size :13455 after 26865
SDD proceeding with computation,1 properties remain. new max is 131072
SDD size :26865 after 53676
TIME LIMIT: Killed by timeout after 3600 seconds
MemTotal: 16393216 kB
MemFree: 11012652 kB
After kill :
MemTotal: 16393216 kB
MemFree: 16070620 kB
BK_TIME_CONFINEMENT_REACHED
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../itstools/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityCardinality = StateSpace ]]
+ /home/mcc/BenchKit/bin//../itstools/bin//..//runeclipse.sh /home/mcc/execution ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ ls /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
++ perl -pe 's/.*\.//g'
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../itstools/bin//..//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityCardinality -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//../itstools/bin//..//greatspn/ -order META -manyOrder -smt -timeout 3600
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Medical-PT-02"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool itstools"
echo " Input is Medical-PT-02, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r229-tall-167856413600654"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"
tar xzf /home/mcc/BenchKit/INPUTS/Medical-PT-02.tgz
mv Medical-PT-02 execution
cd execution
if [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "UpperBounds" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] || [ "ReachabilityCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityCardinality" = "ReachabilityDeadlock" ] || [ "ReachabilityCardinality" = "QuasiLiveness" ] || [ "ReachabilityCardinality" = "StableMarking" ] || [ "ReachabilityCardinality" = "Liveness" ] || [ "ReachabilityCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;