Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r225-tall-167856407900633.qcow2', fmt=qcow2 size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
...................................................................................
=====================================================================
Generated by BenchKit 2-5348
Executing tool marcie
Input is MAPKbis-PT-5310, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r225-tall-167856407900633
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 636K
-rw-r--r-- 1 mcc users 6.4K Feb 25 16:17 CTLCardinality.txt
-rw-r--r-- 1 mcc users 54K Feb 25 16:17 CTLCardinality.xml
-rw-r--r-- 1 mcc users 11K Feb 25 15:59 CTLFireability.txt
-rw-r--r-- 1 mcc users 48K Feb 25 15:59 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.4K Jan 29 11:40 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.2K Feb 25 16:22 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K Feb 25 16:22 LTLCardinality.xml
-rw-r--r-- 1 mcc users 6.0K Feb 25 16:22 LTLFireability.txt
-rw-r--r-- 1 mcc users 21K Feb 25 16:22 LTLFireability.xml
-rw-r--r-- 1 mcc users 13K Feb 25 16:35 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 111K Feb 25 16:35 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 22K Feb 25 16:26 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 82K Feb 25 16:26 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 16:22 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 16:22 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 5 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 170K Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-00
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-01
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-02
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-03
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-04
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-05
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-06
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-07
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-08
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-09
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-10
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-11
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-12
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-13
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-14
FORMULA_NAME MAPKbis-PT-5310-CTLCardinality-15

=== Now, execution of the tool begins

BK_START 1678641143174

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=marcie
BK_EXAMINATION=CTLCardinality
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=MAPKbis-PT-5310
Not applying reductions.
Model is PT
CTLCardinality PT
timeout --kill-after=10s --signal=SIGINT 1m for testing only

Marcie built on Linux at 2019-11-18.
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: /home/mcc/BenchKit/bin//../marcie/bin/marcie --net-file=model.pnml --mcc-file=CTLCardinality.xml --memory=6 --mcc-mode

parse successfull
net created successfully

Net: MAPKbis_PT_5310
(NrP: 106 NrTr: 173 NrArc: 986)

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.002sec

net check time: 0m 0.000sec

init dd package: 0m 2.842sec


RS generation: 0m 0.870sec


-> reachability set: #nodes 395 (4.0e+02) #states 3,846,411,649,024 (12)



starting MCC model checker
--------------------------

checking: AG [~ [EF [AG [1<=p14_equals_1]]]]
normalized: ~ [E [true U E [true U ~ [E [true U ~ [1<=p14_equals_1]]]]]]

abstracting: (1<=p14_equals_1)
states: 1,923,205,824,512 (12)
-> the formula is TRUE

FORMULA MAPKbis-PT-5310-CTLCardinality-00 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.064sec

checking: ~ [AG [PKC_equals_0<=1]]
normalized: E [true U ~ [PKC_equals_0<=1]]

abstracting: (PKC_equals_0<=1)
states: 3,846,411,649,024 (12)
-> the formula is FALSE

FORMULA MAPKbis-PT-5310-CTLCardinality-12 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: AX [[~ [EX [AF [AG [RAS_equals_1<=1]]]] & EF [~ [SMAD_equals_1<=1]]]]
normalized: ~ [EX [~ [[E [true U ~ [SMAD_equals_1<=1]] & ~ [EX [~ [EG [E [true U ~ [RAS_equals_1<=1]]]]]]]]]]

abstracting: (RAS_equals_1<=1)
states: 3,846,411,649,024 (12)
.
EG iterations: 1
.abstracting: (SMAD_equals_1<=1)
states: 3,846,411,649,024 (12)
.-> the formula is FALSE

FORMULA MAPKbis-PT-5310-CTLCardinality-05 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.012sec

checking: ~ [AG [AG [AG [A [1<=MYC_equals_0 U PDK1_equals_0<=1]]]]]
normalized: E [true U E [true U E [true U ~ [[~ [EG [~ [PDK1_equals_0<=1]]] & ~ [E [~ [PDK1_equals_0<=1] U [~ [1<=MYC_equals_0] & ~ [PDK1_equals_0<=1]]]]]]]]]

abstracting: (PDK1_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (1<=MYC_equals_0)
states: 1,923,205,824,512 (12)
abstracting: (PDK1_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (PDK1_equals_0<=1)
states: 3,846,411,649,024 (12)
.
EG iterations: 1
-> the formula is FALSE

FORMULA MAPKbis-PT-5310-CTLCardinality-10 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.001sec

checking: E [SMAD_equals_0<=1 U ~ [CREB_equals_0<=1]]
normalized: E [SMAD_equals_0<=1 U ~ [CREB_equals_0<=1]]

abstracting: (CREB_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (SMAD_equals_0<=1)
states: 3,846,411,649,024 (12)
-> the formula is FALSE

FORMULA MAPKbis-PT-5310-CTLCardinality-15 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.000sec

checking: EX [EF [AX [[PDK1_equals_1<=FGFR3_stimulus_equals_1 & ~ [AX [MDM2_equals_1<=1]]]]]]
normalized: EX [E [true U ~ [EX [~ [[EX [~ [MDM2_equals_1<=1]] & PDK1_equals_1<=FGFR3_stimulus_equals_1]]]]]]

abstracting: (PDK1_equals_1<=FGFR3_stimulus_equals_1)
states: 1,923,205,824,512 (12)
abstracting: (MDM2_equals_1<=1)
states: 3,846,411,649,024 (12)
...-> the formula is FALSE

FORMULA MAPKbis-PT-5310-CTLCardinality-04 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.001sec

checking: AG [AX [AX [[AF [Growth_Arrest_equals_0<=EGFR_stimulus_equals_1] & AG [1<=FGFR3_stimulus_equals_0]]]]]
normalized: ~ [E [true U EX [EX [~ [[~ [E [true U ~ [1<=FGFR3_stimulus_equals_0]]] & ~ [EG [~ [Growth_Arrest_equals_0<=EGFR_stimulus_equals_1]]]]]]]]]

abstracting: (Growth_Arrest_equals_0<=EGFR_stimulus_equals_1)
states: 3,846,411,649,024 (12)
.
EG iterations: 1
abstracting: (1<=FGFR3_stimulus_equals_0)
states: 3,846,411,649,024 (12)
..-> the formula is TRUE

FORMULA MAPKbis-PT-5310-CTLCardinality-08 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.001sec

checking: EF [[EG [EX [~ [AX [PPP2CA_equals_0<=0]]]] & AF [FRS2_equals_0<=p21_equals_1]]]
normalized: E [true U [~ [EG [~ [FRS2_equals_0<=p21_equals_1]]] & EG [EX [EX [~ [PPP2CA_equals_0<=0]]]]]]

abstracting: (PPP2CA_equals_0<=0)
states: 1,922,266,300,416 (12)
...
EG iterations: 1
abstracting: (FRS2_equals_0<=p21_equals_1)
states: 1,923,205,824,512 (12)
.
EG iterations: 1
-> the formula is TRUE

FORMULA MAPKbis-PT-5310-CTLCardinality-11 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.059sec

checking: EF [EF [[~ [[1<=JUN_equals_0 & EG [p70_equals_0<=CREB_equals_1]]] & ~ [EX [E [1<=Growth_Arrest_equals_1 U 1<=SMAD_equals_0]]]]]]
normalized: E [true U E [true U [~ [EX [E [1<=Growth_Arrest_equals_1 U 1<=SMAD_equals_0]]] & ~ [[EG [p70_equals_0<=CREB_equals_1] & 1<=JUN_equals_0]]]]]

abstracting: (1<=JUN_equals_0)
states: 1,923,205,824,512 (12)
abstracting: (p70_equals_0<=CREB_equals_1)
states: 2,884,808,736,768 (12)
.
EG iterations: 1
abstracting: (1<=SMAD_equals_0)
states: 3,846,411,649,024 (12)
abstracting: (1<=Growth_Arrest_equals_1)
states: 1,923,205,824,512 (12)
.-> the formula is FALSE

FORMULA MAPKbis-PT-5310-CTLCardinality-07 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.012sec

checking: EF [[1<=MEK1_2_equals_1 & AG [[GAB1_equals_1<=PLCG_equals_1 & EX [[1<=AKT_0 & 1<=MEK1_2_equals_1]]]]]]
normalized: E [true U [1<=MEK1_2_equals_1 & ~ [E [true U ~ [[GAB1_equals_1<=PLCG_equals_1 & EX [[1<=AKT_0 & 1<=MEK1_2_equals_1]]]]]]]]

abstracting: (1<=MEK1_2_equals_1)
states: 1,922,266,300,416 (12)
abstracting: (1<=AKT_0)
states: 1,923,205,824,512 (12)
.abstracting: (GAB1_equals_1<=PLCG_equals_1)
states: 3,022,180,581,376 (12)
abstracting: (1<=MEK1_2_equals_1)
states: 1,922,266,300,416 (12)
-> the formula is FALSE

FORMULA MAPKbis-PT-5310-CTLCardinality-13 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.021sec

checking: ~ [EF [~ [E [E [AKT_0<=1 U MAP3K1_3_equals_1<=GADD45_equals_1] U [p70_equals_1<=MAP3K1_3_equals_0 | DNA_damage_equals_0<=1]]]]]
normalized: ~ [E [true U ~ [E [E [AKT_0<=1 U MAP3K1_3_equals_1<=GADD45_equals_1] U [p70_equals_1<=MAP3K1_3_equals_0 | DNA_damage_equals_0<=1]]]]]

abstracting: (DNA_damage_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (p70_equals_1<=MAP3K1_3_equals_0)
states: 2,885,278,498,816 (12)
abstracting: (MAP3K1_3_equals_1<=GADD45_equals_1)
states: 2,886,218,022,912 (12)
abstracting: (AKT_0<=1)
states: 3,846,411,649,024 (12)
-> the formula is TRUE

FORMULA MAPKbis-PT-5310-CTLCardinality-06 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.026sec

checking: EF [[Apoptosis_equals_0<=0 & [[AF [[[Proliferation_equals_1<=PI3K_equals_1 & 1<=p21_equals_1] | [1<=SOS_equals_1 & Growth_Arrest_equals_1<=Proliferation_equals_0]]] & ~ [AX [[1<=FOS_equals_1 & 1<=p38_equals_0]]]] | MYC_equals_1<=1]]]
normalized: E [true U [[[~ [EG [~ [[[Proliferation_equals_1<=PI3K_equals_1 & 1<=p21_equals_1] | [1<=SOS_equals_1 & Growth_Arrest_equals_1<=Proliferation_equals_0]]]]] & EX [~ [[1<=FOS_equals_1 & 1<=p38_equals_0]]]] | MYC_equals_1<=1] & Apoptosis_equals_0<=0]]

abstracting: (Apoptosis_equals_0<=0)
states: 1,923,205,824,512 (12)
abstracting: (MYC_equals_1<=1)
states: 3,846,411,649,024 (12)
abstracting: (1<=p38_equals_0)
states: 1,922,266,300,416 (12)
abstracting: (1<=FOS_equals_1)
states: 1,923,205,824,512 (12)
.abstracting: (Growth_Arrest_equals_1<=Proliferation_equals_0)
states: 2,884,808,736,768 (12)
abstracting: (1<=SOS_equals_1)
states: 1,922,266,300,416 (12)
abstracting: (1<=p21_equals_1)
states: 1,923,205,824,512 (12)
abstracting: (Proliferation_equals_1<=PI3K_equals_1)
states: 2,884,808,736,768 (12)
.
EG iterations: 1
-> the formula is TRUE

FORMULA MAPKbis-PT-5310-CTLCardinality-14 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.112sec

checking: EF [[GADD45_equals_0<=p53_equals_0 & [[AG [[~ [PTEN_equals_0<=1] & [ATM_equals_0<=1 | 1<=MAP3K1_3_equals_0]]] & [1<=RSK_equals_1 | EF [EX [p53_equals_0<=1]]]] & [A [p53_equals_0<=0 U GRB2_equals_0<=Proliferation_equals_1] | [EX [AG [RAF_equals_1<=1]] & ~ [AG [ERK_equals_0<=1]]]]]]]
normalized: E [true U [GADD45_equals_0<=p53_equals_0 & [[[E [true U ~ [ERK_equals_0<=1]] & EX [~ [E [true U ~ [RAF_equals_1<=1]]]]] | [~ [EG [~ [GRB2_equals_0<=Proliferation_equals_1]]] & ~ [E [~ [GRB2_equals_0<=Proliferation_equals_1] U [~ [p53_equals_0<=0] & ~ [GRB2_equals_0<=Proliferation_equals_1]]]]]] & [[1<=RSK_equals_1 | E [true U EX [p53_equals_0<=1]]] & ~ [E [true U ~ [[[ATM_equals_0<=1 | 1<=MAP3K1_3_equals_0] & ~ [PTEN_equals_0<=1]]]]]]]]]

abstracting: (PTEN_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (1<=MAP3K1_3_equals_0)
states: 1,924,145,348,608 (12)
abstracting: (ATM_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (p53_equals_0<=1)
states: 3,846,411,649,024 (12)
.abstracting: (1<=RSK_equals_1)
states: 1,922,266,300,416 (12)
abstracting: (GRB2_equals_0<=Proliferation_equals_1)
states: 2,884,808,736,768 (12)
abstracting: (p53_equals_0<=0)
states: 1,922,266,300,416 (12)
abstracting: (GRB2_equals_0<=Proliferation_equals_1)
states: 2,884,808,736,768 (12)
abstracting: (GRB2_equals_0<=Proliferation_equals_1)
states: 2,884,808,736,768 (12)
.
EG iterations: 1
abstracting: (RAF_equals_1<=1)
states: 3,846,411,649,024 (12)
.abstracting: (ERK_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (GADD45_equals_0<=p53_equals_0)
states: 2,886,218,022,912 (12)
-> the formula is FALSE

FORMULA MAPKbis-PT-5310-CTLCardinality-01 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.055sec

checking: [[AG [MSK_equals_0<=1] & ~ [AG [RAS_equals_1<=DUSP1_equals_1]]] & AF [EX [[[[[1<=p38_equals_0 | 1<=MAP3K1_3_equals_0] | [PDK1_equals_0<=MTK1_equals_1 & GAB1_equals_0<=MEK1_2_equals_1]] | AF [1<=MTK1_equals_0]] | ~ [A [1<=p53_equals_1 U 1<=DUSP1_equals_1]]]]]]
normalized: [~ [EG [~ [EX [[~ [[~ [EG [~ [1<=DUSP1_equals_1]]] & ~ [E [~ [1<=DUSP1_equals_1] U [~ [1<=p53_equals_1] & ~ [1<=DUSP1_equals_1]]]]]] | [~ [EG [~ [1<=MTK1_equals_0]]] | [[PDK1_equals_0<=MTK1_equals_1 & GAB1_equals_0<=MEK1_2_equals_1] | [1<=p38_equals_0 | 1<=MAP3K1_3_equals_0]]]]]]]] & [E [true U ~ [RAS_equals_1<=DUSP1_equals_1]] & ~ [E [true U ~ [MSK_equals_0<=1]]]]]

abstracting: (MSK_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (RAS_equals_1<=DUSP1_equals_1)
states: 2,884,338,974,720 (12)
abstracting: (1<=MAP3K1_3_equals_0)
states: 1,924,145,348,608 (12)
abstracting: (1<=p38_equals_0)
states: 1,922,266,300,416 (12)
abstracting: (GAB1_equals_0<=MEK1_2_equals_1)
states: 2,884,338,974,720 (12)
abstracting: (PDK1_equals_0<=MTK1_equals_1)
states: 2,884,338,974,720 (12)
abstracting: (1<=MTK1_equals_0)
states: 1,924,145,348,608 (12)
.
EG iterations: 1
abstracting: (1<=DUSP1_equals_1)
states: 1,923,205,824,512 (12)
abstracting: (1<=p53_equals_1)
states: 1,922,266,300,416 (12)
abstracting: (1<=DUSP1_equals_1)
states: 1,923,205,824,512 (12)
abstracting: (1<=DUSP1_equals_1)
states: 1,923,205,824,512 (12)
.
EG iterations: 1
..
EG iterations: 1
-> the formula is TRUE

FORMULA MAPKbis-PT-5310-CTLCardinality-02 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.054sec

checking: A [[A [[JUN_equals_0<=Growth_Arrest_equals_0 & ~ [[~ [AP1_equals_0<=DNA_damage_equals_1] & [1<=RSK_equals_1 | JNK_equals_1<=1]]]] U SOS_equals_0<=1] | EX [~ [[E [1<=FGFR3_equals_0 U 1<=RAS_equals_0] & [FOS_equals_0<=PDK1_equals_0 | FOS_equals_1<=TGFBR_equals_0]]]]] U ~ [E [~ [[E [ATF2_equals_1<=GADD45_equals_0 U EGFR_equals_0<=TGFBR_equals_1] | EX [ATF2_equals_0<=1]]] U AG [BCL2_equals_1<=0]]]]
normalized: [~ [EG [E [~ [[EX [ATF2_equals_0<=1] | E [ATF2_equals_1<=GADD45_equals_0 U EGFR_equals_0<=TGFBR_equals_1]]] U ~ [E [true U ~ [BCL2_equals_1<=0]]]]]] & ~ [E [E [~ [[EX [ATF2_equals_0<=1] | E [ATF2_equals_1<=GADD45_equals_0 U EGFR_equals_0<=TGFBR_equals_1]]] U ~ [E [true U ~ [BCL2_equals_1<=0]]]] U [E [~ [[EX [ATF2_equals_0<=1] | E [ATF2_equals_1<=GADD45_equals_0 U EGFR_equals_0<=TGFBR_equals_1]]] U ~ [E [true U ~ [BCL2_equals_1<=0]]]] & ~ [[[~ [E [~ [SOS_equals_0<=1] U [~ [[JUN_equals_0<=Growth_Arrest_equals_0 & ~ [[~ [AP1_equals_0<=DNA_damage_equals_1] & [1<=RSK_equals_1 | JNK_equals_1<=1]]]]] & ~ [SOS_equals_0<=1]]]] & ~ [EG [~ [SOS_equals_0<=1]]]] | EX [~ [[E [1<=FGFR3_equals_0 U 1<=RAS_equals_0] & [FOS_equals_0<=PDK1_equals_0 | FOS_equals_1<=TGFBR_equals_0]]]]]]]]]]

abstracting: (FOS_equals_1<=TGFBR_equals_0)
states: 3,846,411,649,024 (12)
abstracting: (FOS_equals_0<=PDK1_equals_0)
states: 2,884,808,736,768 (12)
abstracting: (1<=RAS_equals_0)
states: 1,922,266,300,416 (12)
abstracting: (1<=FGFR3_equals_0)
states: 3,846,411,649,024 (12)
.abstracting: (SOS_equals_0<=1)
states: 3,846,411,649,024 (12)
.
EG iterations: 1
abstracting: (SOS_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (JNK_equals_1<=1)
states: 3,846,411,649,024 (12)
abstracting: (1<=RSK_equals_1)
states: 1,922,266,300,416 (12)
abstracting: (AP1_equals_0<=DNA_damage_equals_1)
states: 1,923,205,824,512 (12)
abstracting: (JUN_equals_0<=Growth_Arrest_equals_0)
states: 2,884,808,736,768 (12)
abstracting: (SOS_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (BCL2_equals_1<=0)
states: 1,923,205,824,512 (12)
abstracting: (EGFR_equals_0<=TGFBR_equals_1)
states: 1,648,462,135,296 (12)
abstracting: (ATF2_equals_1<=GADD45_equals_0)
states: 2,884,338,974,720 (12)
abstracting: (ATF2_equals_0<=1)
states: 3,846,411,649,024 (12)
.abstracting: (BCL2_equals_1<=0)
states: 1,923,205,824,512 (12)
abstracting: (EGFR_equals_0<=TGFBR_equals_1)
states: 1,648,462,135,296 (12)
abstracting: (ATF2_equals_1<=GADD45_equals_0)
states: 2,884,338,974,720 (12)
abstracting: (ATF2_equals_0<=1)
states: 3,846,411,649,024 (12)
.abstracting: (BCL2_equals_1<=0)
states: 1,923,205,824,512 (12)
abstracting: (EGFR_equals_0<=TGFBR_equals_1)
states: 1,648,462,135,296 (12)
abstracting: (ATF2_equals_1<=GADD45_equals_0)
states: 2,884,338,974,720 (12)
abstracting: (ATF2_equals_0<=1)
states: 3,846,411,649,024 (12)
..
EG iterations: 1
-> the formula is TRUE

FORMULA MAPKbis-PT-5310-CTLCardinality-09 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.092sec

checking: E [[[[[[SMAD_equals_1<=1 & A [PKC_equals_0<=1 U BCL2_equals_0<=BCL2_equals_1]] | [[~ [AKT_equals_1<=MSK_equals_0] & [DUSP1_equals_1<=SOS_equals_0 & 1<=PPP2CA_equals_1]] & [ELK1_equals_1<=0 & TAK1_equals_0<=1]]] & [[EG [1<=SPRY_equals_0] & AG [MEK1_2_equals_0<=1]] | ~ [AX [1<=JUN_equals_0]]]] | EG [A [[1<=JUN_equals_1 & p38_equals_0<=0] U 1<=MTK1_equals_0]]] & EX [~ [PLCG_equals_0<=0]]] U ~ [AX [EF [[[CREB_equals_1<=0 | 1<=PI3K_equals_0] & [EGFR_stimulus_equals_0<=1 & TGFBR_stimulus_equals_0<=1]]]]]]
normalized: E [[EX [~ [PLCG_equals_0<=0]] & [EG [[~ [EG [~ [1<=MTK1_equals_0]]] & ~ [E [~ [1<=MTK1_equals_0] U [~ [[1<=JUN_equals_1 & p38_equals_0<=0]] & ~ [1<=MTK1_equals_0]]]]]] | [[EX [~ [1<=JUN_equals_0]] | [~ [E [true U ~ [MEK1_2_equals_0<=1]]] & EG [1<=SPRY_equals_0]]] & [[[ELK1_equals_1<=0 & TAK1_equals_0<=1] & [[DUSP1_equals_1<=SOS_equals_0 & 1<=PPP2CA_equals_1] & ~ [AKT_equals_1<=MSK_equals_0]]] | [SMAD_equals_1<=1 & [~ [EG [~ [BCL2_equals_0<=BCL2_equals_1]]] & ~ [E [~ [BCL2_equals_0<=BCL2_equals_1] U [~ [PKC_equals_0<=1] & ~ [BCL2_equals_0<=BCL2_equals_1]]]]]]]]]] U EX [~ [E [true U [[EGFR_stimulus_equals_0<=1 & TGFBR_stimulus_equals_0<=1] & [CREB_equals_1<=0 | 1<=PI3K_equals_0]]]]]]

abstracting: (1<=PI3K_equals_0)
states: 1,923,205,824,512 (12)
abstracting: (CREB_equals_1<=0)
states: 1,923,205,824,512 (12)
abstracting: (TGFBR_stimulus_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (EGFR_stimulus_equals_0<=1)
states: 3,846,411,649,024 (12)
.abstracting: (BCL2_equals_0<=BCL2_equals_1)
states: 1,923,205,824,512 (12)
abstracting: (PKC_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (BCL2_equals_0<=BCL2_equals_1)
states: 1,923,205,824,512 (12)
abstracting: (BCL2_equals_0<=BCL2_equals_1)
states: 1,923,205,824,512 (12)
.
EG iterations: 1
abstracting: (SMAD_equals_1<=1)
states: 3,846,411,649,024 (12)
abstracting: (AKT_equals_1<=MSK_equals_0)
states: 2,884,808,736,768 (12)
abstracting: (1<=PPP2CA_equals_1)
states: 1,922,266,300,416 (12)
abstracting: (DUSP1_equals_1<=SOS_equals_0)
states: 2,885,278,498,816 (12)
abstracting: (TAK1_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (ELK1_equals_1<=0)
states: 1,923,205,824,512 (12)
abstracting: (1<=SPRY_equals_0)
states: 1,923,205,824,512 (12)
.
EG iterations: 1
abstracting: (MEK1_2_equals_0<=1)
states: 3,846,411,649,024 (12)
abstracting: (1<=JUN_equals_0)
states: 1,923,205,824,512 (12)
.abstracting: (1<=MTK1_equals_0)
states: 1,924,145,348,608 (12)
abstracting: (p38_equals_0<=0)
states: 1,924,145,348,608 (12)
abstracting: (1<=JUN_equals_1)
states: 1,923,205,824,512 (12)
abstracting: (1<=MTK1_equals_0)
states: 1,924,145,348,608 (12)
abstracting: (1<=MTK1_equals_0)
states: 1,924,145,348,608 (12)
.
EG iterations: 1
.
EG iterations: 1
abstracting: (PLCG_equals_0<=0)
states: 2,197,949,513,728 (12)
.-> the formula is FALSE

FORMULA MAPKbis-PT-5310-CTLCardinality-03 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.095sec

totally nodes used: 501168 (5.0e+05)
number of garbage collections: 0
fire ops cache: hits/miss/sum: 1714236 5261920 6976156
used/not used/entry size/cache size: 5502017 61606847 16 1024MB
basic ops cache: hits/miss/sum: 100444 245612 346056
used/not used/entry size/cache size: 450096 16327120 12 192MB
unary ops cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 16777216 8 128MB
abstract ops cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 16777216 12 192MB
state nr cache: hits/miss/sum: 3105 8947 12052
used/not used/entry size/cache size: 8943 8379665 32 256MB
max state cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 8388608 32 256MB
uniqueHash elements/entry size/size: 67108864 4 256MB
0 66623690
1 470177
2 14047
3 905
4 43
5 2
6 0
7 0
8 0
9 0
>= 10 0

Total processing time: 0m 6.050sec


BK_STOP 1678641149271

--------------------
content from stderr:

check for maximal unmarked siphon
found
The net has a maximal unmarked siphon:
ATM_equals_1
SMAD_equals_1
TAK1_equals_1
TAOK_equals_1
TGFBR_equals_1
TGFBR_stimulus_equals_1
FGFR3_stimulus_equals_1
EGFR_stimulus_equals_0
FRS2_equals_1
DNA_damage_equals_1
FGFR3_equals_1

The net has transition(s) that can never fire:
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_1
GADD45_equals_0_to_GADD45_equals_1_when_SMAD_equals_1
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1
GRB2_equals_0_to_GRB2_equals_1_when_FRS2_equals_1
GRB2_equals_0_to_GRB2_equals_1_when_TGFBR_equals_1
p53_equals_1_to_p53_equals_0_when_ATM_equals_1_and_MDM2_equals_1_and_p38_equals_0
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAOK_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAK1_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAOK_equals_1
p53_equals_0_to_p53_equals_1_when_ATM_equals_1_and_MDM2_equals_0
p53_equals_0_to_p53_equals_1_when_ATM_equals_1_and_p38_equals_1
PLCG_equals_0_to_PLCG_equals_1_when_FGFR3_equals_1
TAK1_equals_0_to_TAK1_equals_1_when_TGFBR_equals_1
TAK1_equals_1_to_TAK1_equals_0_when_TGFBR_equals_0
TAOK_equals_0_to_TAOK_equals_1_when_ATM_equals_1
TAOK_equals_1_to_TAOK_equals_0_when_ATM_equals_0
TGFBR_equals_0_to_TGFBR_equals_1_when_TGFBR_stimulus_equals_1
TGFBR_equals_1_to_TGFBR_equals_0_when_TGFBR_stimulus_equals_0
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_TAK1_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_0_and_TAOK_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_0_and_TAK1_equals_1_and_TAOK_equals_1
p38_equals_0_to_p38_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_0_and_MTK1_equals_1_and_TAK1_equals_1
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_0_and_TAK1_equals_1
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_0_and_TAOK_equals_1
SMAD_equals_0_to_SMAD_equals_1_when_TGFBR_equals_1
SMAD_equals_1_to_SMAD_equals_0_when_TGFBR_equals_0
FGFR3_equals_0_to_FGFR3_equals_1_when_FGFR3_stimulus_equals_1_and_GRB2_equals_0_and_PKC_equals_0
FGFR3_equals_1_to_FGFR3_equals_0_when_FGFR3_stimulus_equals_0
FGFR3_equals_1_to_FGFR3_equals_0_when_GRB2_equals_1
FGFR3_equals_1_to_FGFR3_equals_0_when_PKC_equals_1
FRS2_equals_1_to_FRS2_equals_0_when_GRB2_equals_1
FRS2_equals_1_to_FRS2_equals_0_when_SPRY_equals_1
EGFR_equals_0_to_EGFR_equals_1_when_EGFR_stimulus_equals_0_and_GRB2_equals_0_and_PKC_equals_0_and_SPRY_equals_1
ATM_equals_0_to_ATM_equals_1_when_DNA_damage_equals_1
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAK1_equals_1
JNK_equals_0_to_JNK_equals_1_when_DUSP1_equals_1_and_MAP3K1_3_equals_1_and_TAOK_equals_1
FRS2_equals_0_to_FRS2_equals_1_when_FGFR3_equals_1_and_GRB2_equals_0_and_SPRY_equals_0
FRS2_equals_1_to_FRS2_equals_0_when_FGFR3_equals_0
ATM_equals_1_to_ATM_equals_0_when_DNA_damage_equals_0
EGFR_equals_1_to_EGFR_equals_0_when_EGFR_stimulus_equals_0_and_SPRY_equals_0

check for constant places
DNA_damage_equals_0
DNA_damage_equals_1
EGFR_stimulus_equals_0
EGFR_stimulus_equals_1
FGFR3_stimulus_equals_0
FGFR3_stimulus_equals_1
TGFBR_stimulus_equals_0
TGFBR_stimulus_equals_1
found 8 constant places
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.002sec


iterations count:21457 (124), effective:1545 (8)

initing FirstDep: 0m 0.000sec


iterations count:1920 (11), effective:86 (0)

iterations count:1895 (10), effective:86 (0)

iterations count:173 (1), effective:0 (0)

iterations count:219 (1), effective:8 (0)

iterations count:931 (5), effective:38 (0)

iterations count:173 (1), effective:0 (0)

iterations count:2854 (16), effective:128 (0)

iterations count:173 (1), effective:0 (0)

iterations count:173 (1), effective:0 (0)

iterations count:933 (5), effective:28 (0)

iterations count:1588 (9), effective:73 (0)

iterations count:644 (3), effective:19 (0)

iterations count:211 (1), effective:7 (0)

iterations count:1594 (9), effective:68 (0)

iterations count:189 (1), effective:4 (0)

iterations count:1594 (9), effective:68 (0)

iterations count:189 (1), effective:4 (0)

iterations count:1594 (9), effective:68 (0)

iterations count:189 (1), effective:4 (0)

iterations count:1674 (9), effective:75 (0)

iterations count:462 (2), effective:14 (0)

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5310"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool marcie"
echo " Input is MAPKbis-PT-5310, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r225-tall-167856407900633"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5310.tgz
mv MAPKbis-PT-5310 execution
cd execution
if [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "UpperBounds" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] || [ "CTLCardinality" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLCardinality" = "ReachabilityDeadlock" ] || [ "CTLCardinality" = "QuasiLiveness" ] || [ "CTLCardinality" = "StableMarking" ] || [ "CTLCardinality" = "Liveness" ] || [ "CTLCardinality" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLCardinality"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;