Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r032-oct2-167813615800214.qcow2', fmt=qcow2 cluster_size=65536 extended_l2=off compression_type=zlib size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 backing_fmt=qcow2 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................
=====================================================================
Generated by BenchKit 2-5348
Executing tool gold2022
Input is Angiogenesis-PT-15, examination is Liveness
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r032-oct2-167813615800214
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 476K
-rw-r--r-- 1 mcc users 8.5K Feb 26 14:55 CTLCardinality.txt
-rw-r--r-- 1 mcc users 85K Feb 26 14:55 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.4K Feb 26 14:55 CTLFireability.txt
-rw-r--r-- 1 mcc users 50K Feb 26 14:55 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3.8K Feb 25 15:31 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K Feb 25 15:31 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Feb 25 15:31 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 25 15:31 LTLFireability.xml
-rw-r--r-- 1 mcc users 9.7K Feb 26 14:56 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 83K Feb 26 14:56 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 9.6K Feb 26 14:56 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 89K Feb 26 14:56 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 15:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 15:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 3 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 33K Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME Liveness

=== Now, execution of the tool begins

BK_START 1678837136369

Running Version 202205111006
[2023-03-14 23:38:58] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, Liveness, -spotpath, /home/mcc/BenchKit/bin//..//ltlfilt, -z3path, /home/mcc/BenchKit/bin//..//z3/bin/z3, -yices2path, /home/mcc/BenchKit/bin//..//yices/bin/yices, -its, -ltsmin, -greatspnpath, /home/mcc/BenchKit/bin//..//greatspn/, -order, META, -manyOrder, -smt, -timeout, 1800]
[2023-03-14 23:38:58] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-14 23:38:58] [INFO ] Load time of PNML (sax parser for PT used): 124 ms
[2023-03-14 23:38:58] [INFO ] Transformed 39 places.
[2023-03-14 23:38:58] [INFO ] Transformed 64 transitions.
[2023-03-14 23:38:58] [INFO ] Parsed PT model containing 39 places and 64 transitions in 253 ms.
Discarding 24 transitions out of 64. Remains 40
Built sparse matrix representations for Structural reductions in 26 ms.8744KB memory used
Starting structural reductions in DEADLOCKS mode, iteration 0 : 39/39 places, 64/64 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Graph (complete) has 117 edges and 39 vertex of which 38 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.14 ms
Discarding 1 places :
Also discarding 0 output transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Computed a total of 0 stabilizing places and 0 stable transitions
Applied a total of 1 rules in 31 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
Finished structural reductions, in 1 iterations. Remains : 38/39 places, 64/64 transitions.
Random walk for 1250014 steps, including 0 resets, run took 407 ms (no deadlock found). (steps per millisecond=3071 )
Finished random directed walk after 358941 steps, including 0 resets, run found a deadlock after 110 ms. (steps per millisecond=3263 )
FORMULA Liveness FALSE TECHNIQUES STRUCTURAL DEADLOCK_TEST
Total runtime 993 ms.

BK_STOP 1678837139816

--------------------
content from stderr:

+ export LANG=C
+ LANG=C
+ export BINDIR=/home/mcc/BenchKit/bin//../
+ BINDIR=/home/mcc/BenchKit/bin//../
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ Liveness = StateSpace ]]
+ /home/mcc/BenchKit/bin//..//runeclipse.sh /home/mcc/execution Liveness -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800
+ ulimit -s 65536
+ export PYTHONPATH=/usr/lib/python3.9/site-packages/
+ PYTHONPATH=/usr/lib/python3.9/site-packages/
+ export LD_LIBRARY_PATH=/usr/local/lib:
+ LD_LIBRARY_PATH=/usr/local/lib:
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//..//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202205111006.jar
+ VERSION=202205111006
+ echo 'Running Version 202205111006'
+ /home/mcc/BenchKit/bin//..//itstools/its-tools -data @none -pnfolder /home/mcc/execution -examination Liveness -spotpath /home/mcc/BenchKit/bin//..//ltlfilt -z3path /home/mcc/BenchKit/bin//..//z3/bin/z3 -yices2path /home/mcc/BenchKit/bin//..//yices/bin/yices -its -ltsmin -greatspnpath /home/mcc/BenchKit/bin//..//greatspn/ -order META -manyOrder -smt -timeout 1800 -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=@none -Xss128m -Xms40m -Xmx8192m

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-15"
export BK_EXAMINATION="Liveness"
export BK_TOOL="gold2022"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool gold2022"
echo " Input is Angiogenesis-PT-15, examination is Liveness"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r032-oct2-167813615800214"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-15.tgz
mv Angiogenesis-PT-15 execution
cd execution
if [ "Liveness" = "ReachabilityDeadlock" ] || [ "Liveness" = "UpperBounds" ] || [ "Liveness" = "QuasiLiveness" ] || [ "Liveness" = "StableMarking" ] || [ "Liveness" = "Liveness" ] || [ "Liveness" = "OneSafe" ] || [ "Liveness" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "Liveness" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "Liveness" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "Liveness.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property Liveness.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "Liveness.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' Liveness.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "Liveness" = "ReachabilityDeadlock" ] || [ "Liveness" = "QuasiLiveness" ] || [ "Liveness" = "StableMarking" ] || [ "Liveness" = "Liveness" ] || [ "Liveness" = "OneSafe" ] ; then
echo "FORMULA_NAME Liveness"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;