Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r011-oct2-167813600100360.qcow2', fmt=qcow2 cluster_size=65536 extended_l2=off compression_type=zlib size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 backing_fmt=qcow2 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
.......................
=====================================================================
Generated by BenchKit 2-5348
Executing tool smartxred
Input is Angiogenesis-PT-25, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r011-oct2-167813600100360
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 500K
-rw-r--r-- 1 mcc users 7.8K Feb 26 14:50 CTLCardinality.txt
-rw-r--r-- 1 mcc users 77K Feb 26 14:50 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.5K Feb 26 14:49 CTLFireability.txt
-rw-r--r-- 1 mcc users 52K Feb 26 14:49 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 4.1K Feb 25 15:31 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Feb 25 15:31 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Feb 25 15:31 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K Feb 25 15:31 LTLFireability.xml
-rw-r--r-- 1 mcc users 16K Feb 26 14:51 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 148K Feb 26 14:51 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 6.5K Feb 26 14:50 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 53K Feb 26 14:50 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 15:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 15:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 3 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 33K Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1678734122272

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=smartxred
BK_EXAMINATION=StateSpace
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Angiogenesis-PT-25
Applying reductions before tool smart
Invoking reducer
Running Version 202303021504
[2023-03-13 19:02:04] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -timeout, 360, -rebuildPNML]
[2023-03-13 19:02:04] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-13 19:02:04] [INFO ] Load time of PNML (sax parser for PT used): 46 ms
[2023-03-13 19:02:04] [INFO ] Transformed 39 places.
[2023-03-13 19:02:04] [INFO ] Transformed 64 transitions.
[2023-03-13 19:02:04] [INFO ] Parsed PT model containing 39 places and 64 transitions and 185 arcs in 175 ms.
[2023-03-13 19:02:04] [INFO ] Export to PNML in file /home/mcc/execution/model.sr.pnml of net with 39 places, 64 transitions and 185 arcs took 3 ms.
Total runtime 325 ms.
There are residual formulas that ITS could not solve within timeout
======================================================
========== this is Smart for the MCC'2018 ============
======================================================
Running Angiogenesis (PT), instance 25
Examination StateSpace
Parser /home/mcc/BenchKit/bin//../reducer/bin//../../smart/bin//parser/StateSpaceParse.jar
Model checker /home/mcc/BenchKit/bin//../reducer/bin//../../smart/bin//main//smart

Filename model.pnml
Petri model created: 39 places, 64 transitions, 185 arcs.
AT ITER 0 NEW BEST:: SOT 1589 SOS 744 HAS SOPS 744 HAS SOUS 583 HAS SOUPS 583 WITH SCORE 583.744
AT ITER 21 NEW BEST:: SOT 1589 SOS 734 HAS SOPS 734 HAS SOUS 582 HAS SOUPS 582 WITH SCORE 582.734
AT ITER 29 NEW BEST:: SOT 1586 SOS 732 HAS SOPS 732 HAS SOUS 580 HAS SOUPS 580 WITH SCORE 580.732
AT ITER 36 NEW BEST:: SOT 1582 SOS 728 HAS SOPS 728 HAS SOUS 576 HAS SOUPS 576 WITH SCORE 576.728
AT ITER 38 NEW BEST:: SOT 1582 SOS 729 HAS SOPS 729 HAS SOUS 575 HAS SOUPS 575 WITH SCORE 575.729
AT ITER 48 NEW BEST:: SOT 1580 SOS 735 HAS SOPS 735 HAS SOUS 571 HAS SOUPS 571 WITH SCORE 571.735
AT ITER 67 NEW BEST:: SOT 1554 SOS 728 HAS SOPS 728 HAS SOUS 557 HAS SOUPS 557 WITH SCORE 557.728
AT ITER 69 NEW BEST:: SOT 1552 SOS 726 HAS SOPS 726 HAS SOUS 555 HAS SOUPS 555 WITH SCORE 555.726
AT ITER 73 NEW BEST:: SOT 1536 SOS 716 HAS SOPS 716 HAS SOUS 545 HAS SOUPS 545 WITH SCORE 545.716
AT ITER 76 NEW BEST:: SOT 1529 SOS 711 HAS SOPS 711 HAS SOUS 538 HAS SOUPS 538 WITH SCORE 538.711
AT ITER 78 NEW BEST:: SOT 1515 SOS 700 HAS SOPS 700 HAS SOUS 516 HAS SOUPS 516 WITH SCORE 516.7
AT ITER 80 NEW BEST:: SOT 1514 SOS 699 HAS SOPS 699 HAS SOUS 514 HAS SOUPS 514 WITH SCORE 514.699
AT ITER 90 NEW BEST:: SOT 1513 SOS 698 HAS SOPS 698 HAS SOUS 513 HAS SOUPS 513 WITH SCORE 513.698
AT ITER 124 NEW BEST:: SOT 1512 SOS 699 HAS SOPS 699 HAS SOUS 510 HAS SOUPS 510 WITH SCORE 510.699
AT ITER 153 NEW BEST:: SOT 1512 SOS 699 HAS SOPS 699 HAS SOUS 509 HAS SOUPS 509 WITH SCORE 509.699
AT ITER 163 NEW BEST:: SOT 1512 SOS 700 HAS SOPS 700 HAS SOUS 508 HAS SOUPS 508 WITH SCORE 508.7
AT ITER 181 NEW BEST:: SOT 1501 SOS 750 HAS SOPS 750 HAS SOUS 502 HAS SOUPS 502 WITH SCORE 502.75
AT ITER 184 NEW BEST:: SOT 1494 SOS 741 HAS SOPS 741 HAS SOUS 487 HAS SOUPS 487 WITH SCORE 487.741
AT ITER 212 NEW BEST:: SOT 1492 SOS 737 HAS SOPS 737 HAS SOUS 481 HAS SOUPS 481 WITH SCORE 481.737
AT ITER 216 NEW BEST:: SOT 1492 SOS 725 HAS SOPS 725 HAS SOUS 480 HAS SOUPS 480 WITH SCORE 480.725
AT ITER 244 NEW BEST:: SOT 1489 SOS 722 HAS SOPS 722 HAS SOUS 474 HAS SOUPS 474 WITH SCORE 474.722
AT ITER 249 NEW BEST:: SOT 1489 SOS 722 HAS SOPS 722 HAS SOUS 472 HAS SOUPS 472 WITH SCORE 472.722
AT ITER 261 NEW BEST:: SOT 1487 SOS 720 HAS SOPS 720 HAS SOUS 469 HAS SOUPS 469 WITH SCORE 469.72
AT ITER 270 NEW BEST:: SOT 1485 SOS 721 HAS SOPS 721 HAS SOUS 468 HAS SOUPS 468 WITH SCORE 468.721
AT ITER 277 NEW BEST:: SOT 1487 SOS 685 HAS SOPS 685 HAS SOUS 468 HAS SOUPS 468 WITH SCORE 468.685
AT ITER 291 NEW BEST:: SOT 1479 SOS 682 HAS SOPS 682 HAS SOUS 460 HAS SOUPS 460 WITH SCORE 460.682
AT ITER 297 NEW BEST:: SOT 1475 SOS 666 HAS SOPS 666 HAS SOUS 450 HAS SOUPS 450 WITH SCORE 450.666
AT ITER 354 NEW BEST:: SOT 1464 SOS 683 HAS SOPS 683 HAS SOUS 443 HAS SOUPS 443 WITH SCORE 443.683
AT ITER 368 NEW BEST:: SOT 1467 SOS 682 HAS SOPS 682 HAS SOUS 440 HAS SOUPS 440 WITH SCORE 440.682
AT ITER 376 NEW BEST:: SOT 1465 SOS 681 HAS SOPS 681 HAS SOUS 438 HAS SOUPS 438 WITH SCORE 438.681
AT ITER 380 NEW BEST:: SOT 1464 SOS 680 HAS SOPS 680 HAS SOUS 435 HAS SOUPS 435 WITH SCORE 435.68
AT ITER 420 NEW BEST:: SOT 1462 SOS 674 HAS SOPS 674 HAS SOUS 433 HAS SOUPS 433 WITH SCORE 433.674
AT ITER 437 NEW BEST:: SOT 1460 SOS 660 HAS SOPS 660 HAS SOUS 428 HAS SOUPS 428 WITH SCORE 428.66
AT ITER 444 NEW BEST:: SOT 1458 SOS 658 HAS SOPS 658 HAS SOUS 426 HAS SOUPS 426 WITH SCORE 426.658
AT ITER 498 NEW BEST:: SOT 1455 SOS 655 HAS SOPS 655 HAS SOUS 417 HAS SOUPS 417 WITH SCORE 417.655
AT ITER 612 NEW BEST:: SOT 1452 SOS 652 HAS SOPS 652 HAS SOUS 414 HAS SOUPS 414 WITH SCORE 414.652
AT ITER 614 NEW BEST:: SOT 1452 SOS 650 HAS SOPS 650 HAS SOUS 414 HAS SOUPS 414 WITH SCORE 414.65
AT ITER 692 NEW BEST:: SOT 1440 SOS 639 HAS SOPS 639 HAS SOUS 401 HAS SOUPS 401 WITH SCORE 401.639
AT ITER 707 NEW BEST:: SOT 1437 SOS 642 HAS SOPS 642 HAS SOUS 400 HAS SOUPS 400 WITH SCORE 400.642
AT ITER 708 NEW BEST:: SOT 1437 SOS 641 HAS SOPS 641 HAS SOUS 399 HAS SOUPS 399 WITH SCORE 399.641
AT ITER 727 NEW BEST:: SOT 1436 SOS 686 HAS SOPS 686 HAS SOUS 398 HAS SOUPS 398 WITH SCORE 398.686
AT ITER 758 NEW BEST:: SOT 1434 SOS 644 HAS SOPS 644 HAS SOUS 394 HAS SOUPS 394 WITH SCORE 394.644
AT ITER 804 NEW BEST:: SOT 1432 SOS 646 HAS SOPS 646 HAS SOUS 392 HAS SOUPS 392 WITH SCORE 392.646
AT ITER 815 NEW BEST:: SOT 1432 SOS 643 HAS SOPS 643 HAS SOUS 390 HAS SOUPS 390 WITH SCORE 390.643
AT ITER 819 NEW BEST:: SOT 1432 SOS 643 HAS SOPS 643 HAS SOUS 388 HAS SOUPS 388 WITH SCORE 388.643
AT ITER 912 NEW BEST:: SOT 1430 SOS 643 HAS SOPS 643 HAS SOUS 386 HAS SOUPS 386 WITH SCORE 386.643
AT ITER 929 NEW BEST:: SOT 1433 SOS 617 HAS SOPS 617 HAS SOUS 386 HAS SOUPS 386 WITH SCORE 386.617
AT ITER 966 NEW BEST:: SOT 1429 SOS 631 HAS SOPS 631 HAS SOUS 383 HAS SOUPS 383 WITH SCORE 383.631
AT ITER 1069 NEW BEST:: SOT 1427 SOS 630 HAS SOPS 630 HAS SOUS 380 HAS SOUPS 380 WITH SCORE 380.63
AT ITER 1304 NEW BEST:: SOT 1426 SOS 637 HAS SOPS 637 HAS SOUS 379 HAS SOUPS 379 WITH SCORE 379.637
AT ITER 1342 NEW BEST:: SOT 1424 SOS 635 HAS SOPS 635 HAS SOUS 377 HAS SOUPS 377 WITH SCORE 377.635
AT ITER 1359 NEW BEST:: SOT 1425 SOS 630 HAS SOPS 630 HAS SOUS 376 HAS SOUPS 376 WITH SCORE 376.63
AT ITER 1502 NEW BEST:: SOT 1426 SOS 619 HAS SOPS 619 HAS SOUS 376 HAS SOUPS 376 WITH SCORE 376.619
AT ITER 2014 NEW BEST:: SOT 1424 SOS 639 HAS SOPS 639 HAS SOUS 375 HAS SOUPS 375 WITH SCORE 375.639

BK_STOP 1678735287621

--------------------
content from stderr:

+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination StateSpace -timeout 360 -rebuildPNML
cp: cannot stat 'StateSpace.sr.xml': No such file or directory
/home/mcc/BenchKit/bin//../reducer/bin//../../smart/bin//smart.sh: line 116: 489 Killed ${SMART}/smart ${INPUT_SM}

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-25"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="smartxred"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool smartxred"
echo " Input is Angiogenesis-PT-25, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r011-oct2-167813600100360"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-25.tgz
mv Angiogenesis-PT-25 execution
cd execution
if [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "UpperBounds" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] || [ "StateSpace" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "StateSpace" = "ReachabilityDeadlock" ] || [ "StateSpace" = "QuasiLiveness" ] || [ "StateSpace" = "StableMarking" ] || [ "StateSpace" = "Liveness" ] || [ "StateSpace" = "OneSafe" ] ; then
echo "FORMULA_NAME StateSpace"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;