Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r011-oct2-167813600000319.qcow2', fmt=qcow2 cluster_size=65536 extended_l2=off compression_type=zlib size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 backing_fmt=qcow2 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
......................
=====================================================================
Generated by BenchKit 2-5348
Executing tool smartxred
Input is Angiogenesis-PT-01, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r011-oct2-167813600000319
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 540K
-rw-r--r-- 1 mcc users 7.3K Feb 26 14:53 CTLCardinality.txt
-rw-r--r-- 1 mcc users 66K Feb 26 14:53 CTLCardinality.xml
-rw-r--r-- 1 mcc users 4.6K Feb 26 14:53 CTLFireability.txt
-rw-r--r-- 1 mcc users 38K Feb 26 14:53 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K Jan 29 11:40 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.1K Feb 25 15:31 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K Feb 25 15:31 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K Feb 25 15:31 LTLFireability.txt
-rw-r--r-- 1 mcc users 16K Feb 25 15:31 LTLFireability.xml
-rw-r--r-- 1 mcc users 18K Feb 26 14:53 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 175K Feb 26 14:53 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.8K Feb 26 14:53 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 80K Feb 26 14:53 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 15:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K Feb 25 15:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 3 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 34K Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-00
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-01
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-02
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-03
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-04
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-05
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-06
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-07
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-08
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-09
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-10
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-11
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-12
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-13
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-14
FORMULA_NAME Angiogenesis-PT-01-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1678733243797

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=smartxred
BK_EXAMINATION=ReachabilityFireability
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Angiogenesis-PT-01
Applying reductions before tool smart
Invoking reducer
Running Version 202303021504
[2023-03-13 18:47:26] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityFireability, -timeout, 360, -rebuildPNML]
[2023-03-13 18:47:26] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-13 18:47:27] [INFO ] Load time of PNML (sax parser for PT used): 173 ms
[2023-03-13 18:47:27] [INFO ] Transformed 39 places.
[2023-03-13 18:47:27] [INFO ] Transformed 64 transitions.
[2023-03-13 18:47:27] [INFO ] Found NUPN structural information;
[2023-03-13 18:47:27] [INFO ] Parsed PT model containing 39 places and 64 transitions and 185 arcs in 283 ms.
Parsed 16 properties from file /home/mcc/execution/ReachabilityFireability.xml in 11 ms.
Working with output stream class java.io.PrintStream
Initial state reduction rules removed 7 formulas.
FORMULA Angiogenesis-PT-01-ReachabilityFireability-02 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-03 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-04 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-05 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-06 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-09 FALSE TECHNIQUES TOPOLOGICAL INITIAL_STATE
FORMULA Angiogenesis-PT-01-ReachabilityFireability-10 TRUE TECHNIQUES TOPOLOGICAL INITIAL_STATE
Incomplete random walk after 10000 steps, including 3 resets, run finished after 361 ms. (steps per millisecond=27 ) properties (out of 9) seen :4
FORMULA Angiogenesis-PT-01-ReachabilityFireability-15 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Angiogenesis-PT-01-ReachabilityFireability-13 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Angiogenesis-PT-01-ReachabilityFireability-11 TRUE TECHNIQUES TOPOLOGICAL RANDOM_WALK
FORMULA Angiogenesis-PT-01-ReachabilityFireability-07 FALSE TECHNIQUES TOPOLOGICAL RANDOM_WALK
Incomplete Best-First random walk after 10000 steps, including 2 resets, run finished after 200 ms. (steps per millisecond=50 ) properties (out of 5) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 96 ms. (steps per millisecond=104 ) properties (out of 5) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 112 ms. (steps per millisecond=89 ) properties (out of 5) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 115 ms. (steps per millisecond=86 ) properties (out of 5) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 71 ms. (steps per millisecond=140 ) properties (out of 5) seen :0
Running SMT prover for 5 properties.
// Phase 1: matrix 64 rows 39 cols
[2023-03-13 18:47:28] [INFO ] Computed 8 place invariants in 4 ms
[2023-03-13 18:47:28] [INFO ] [Real]Absence check using 8 positive place invariants in 11 ms returned sat
[2023-03-13 18:47:28] [INFO ] After 234ms SMT Verify possible using all constraints in real domain returned unsat :1 sat :0 real:4
[2023-03-13 18:47:28] [INFO ] [Nat]Absence check using 8 positive place invariants in 6 ms returned sat
[2023-03-13 18:47:28] [INFO ] After 47ms SMT Verify possible using state equation in natural domain returned unsat :4 sat :1
[2023-03-13 18:47:28] [INFO ] Deduced a trap composed of 23 places in 61 ms of which 11 ms to minimize.
[2023-03-13 18:47:28] [INFO ] Trap strengthening procedure managed to obtain unsat after adding 1 trap constraints in 71 ms
[2023-03-13 18:47:28] [INFO ] After 126ms SMT Verify possible using trap constraints in natural domain returned unsat :5 sat :0
[2023-03-13 18:47:28] [INFO ] After 249ms SMT Verify possible using all constraints in natural domain returned unsat :5 sat :0
FORMULA Angiogenesis-PT-01-ReachabilityFireability-14 FALSE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
FORMULA Angiogenesis-PT-01-ReachabilityFireability-12 TRUE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
FORMULA Angiogenesis-PT-01-ReachabilityFireability-08 FALSE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
FORMULA Angiogenesis-PT-01-ReachabilityFireability-01 FALSE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
FORMULA Angiogenesis-PT-01-ReachabilityFireability-00 FALSE TECHNIQUES STRUCTURAL_REDUCTION TOPOLOGICAL SAT_SMT
Fused 5 Parikh solutions to 0 different solutions.
Parikh walk visited 0 properties in 0 ms.
All properties solved without resorting to model-checking.
Total runtime 1912 ms.
======================================================
========== this is Smart for the MCC'2018 ============
======================================================
Running Angiogenesis (PT), instance 01
Examination ReachabilityFireability
Parser /home/mcc/BenchKit/bin//../reducer/bin//../../smart/bin//parser/Fireability.jar
Model checker /home/mcc/BenchKit/bin//../reducer/bin//../../smart/bin//rem_exec//smart

GOT IT HERE. BS
Petri model created: 39 places, 64 transitions, 185 arcs.
Final Score: 359.631
Took : 2 seconds
Reachability Fireability file is: ReachabilityFireability.xml
READY TO PARSE. BS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-00 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-01 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-02 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-03 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-04 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-05 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-06 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-07 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-08 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-09 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-10 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-11 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-12 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-13 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-14 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS
FORMULA Angiogenesis-PT-01-ReachabilityFireability-15 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS

BK_STOP 1678733251814

--------------------
content from stderr:

+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination ReachabilityFireability -timeout 360 -rebuildPNML

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-01"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="smartxred"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool smartxred"
echo " Input is Angiogenesis-PT-01, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r011-oct2-167813600000319"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-01.tgz
mv Angiogenesis-PT-01 execution
cd execution
if [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "UpperBounds" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] || [ "ReachabilityFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "ReachabilityFireability" = "ReachabilityDeadlock" ] || [ "ReachabilityFireability" = "QuasiLiveness" ] || [ "ReachabilityFireability" = "StableMarking" ] || [ "ReachabilityFireability" = "Liveness" ] || [ "ReachabilityFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME ReachabilityFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;