Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/data/fkordon/mcc2023-input.r010-oct2-167813598900362.qcow2', fmt=qcow2 cluster_size=65536 extended_l2=off compression_type=zlib size=4294967296 backing_file=/data/fkordon/mcc2023-input.qcow2 backing_fmt=qcow2 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-5348
Executing tool marciexred
Input is Angiogenesis-PT-50, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r010-oct2-167813598900362
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 520K
-rw-r--r-- 1 mcc users 12K Feb 26 14:53 CTLCardinality.txt
-rw-r--r-- 1 mcc users 122K Feb 26 14:53 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.0K Feb 26 14:52 CTLFireability.txt
-rw-r--r-- 1 mcc users 58K Feb 26 14:52 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K Jan 29 11:40 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.5K Jan 29 11:40 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.2K Feb 25 15:31 LTLCardinality.txt
-rw-r--r-- 1 mcc users 27K Feb 25 15:31 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K Feb 25 15:31 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K Feb 25 15:31 LTLFireability.xml
-rw-r--r-- 1 mcc users 10K Feb 26 14:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 92K Feb 26 14:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 8.0K Feb 26 14:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 72K Feb 26 14:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 25 15:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Feb 25 15:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 equiv_col
-rw-r--r-- 1 mcc users 3 Mar 5 18:22 instance
-rw-r--r-- 1 mcc users 6 Mar 5 18:22 iscolored
-rw-r--r-- 1 mcc users 33K Mar 5 18:22 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-00
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-01
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-02
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-03
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-04
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-05
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-06
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-07
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-08
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-09
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-10
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-11
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-12
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-13
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-14
FORMULA_NAME Angiogenesis-PT-50-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1678685734129

bash -c /home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n "BK_STOP " ; date -u +%s%3N
Invoking MCC driver with
BK_TOOL=marciexred
BK_EXAMINATION=CTLFireability
BK_BIN_PATH=/home/mcc/BenchKit/bin/
BK_TIME_CONFINEMENT=3600
BK_INPUT=Angiogenesis-PT-50
Applying reductions before tool marcie
Invoking reducer
Running Version 202303021504
[2023-03-13 05:35:36] [INFO ] Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -timeout, 360, -rebuildPNML]
[2023-03-13 05:35:36] [INFO ] Parsing pnml file : /home/mcc/execution/model.pnml
[2023-03-13 05:35:36] [INFO ] Load time of PNML (sax parser for PT used): 35 ms
[2023-03-13 05:35:36] [INFO ] Transformed 39 places.
[2023-03-13 05:35:36] [INFO ] Transformed 64 transitions.
[2023-03-13 05:35:36] [INFO ] Parsed PT model containing 39 places and 64 transitions and 185 arcs in 109 ms.
Parsed 16 properties from file /home/mcc/execution/CTLFireability.xml in 9 ms.
Support contains 37 out of 39 places. Attempting structural reductions.
Starting structural reductions in LTL mode, iteration 0 : 39/39 places, 64/64 transitions.
Reduce places removed 1 places and 0 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 1 place count 38 transition count 64
Applied a total of 1 rules in 11 ms. Remains 38 /39 variables (removed 1) and now considering 64/64 (removed 0) transitions.
// Phase 1: matrix 64 rows 38 cols
[2023-03-13 05:35:37] [INFO ] Computed 7 place invariants in 11 ms
[2023-03-13 05:35:37] [INFO ] Implicit Places using invariants in 257 ms returned []
[2023-03-13 05:35:37] [INFO ] Invariant cache hit.
[2023-03-13 05:35:37] [INFO ] Implicit Places using invariants and state equation in 128 ms returned []
Implicit Place search using SMT with State Equation took 417 ms to find 0 implicit places.
[2023-03-13 05:35:37] [INFO ] Invariant cache hit.
[2023-03-13 05:35:37] [INFO ] Dead Transitions using invariants and state equation in 105 ms found 0 transitions.
Starting structural reductions in LTL mode, iteration 1 : 38/39 places, 64/64 transitions.
Finished structural reductions in LTL mode , in 1 iterations and 535 ms. Remains : 38/39 places, 64/64 transitions.
Support contains 37 out of 38 places after structural reductions.
[2023-03-13 05:35:37] [INFO ] Flatten gal took : 40 ms
[2023-03-13 05:35:37] [INFO ] Flatten gal took : 9 ms
[2023-03-13 05:35:37] [INFO ] Input system was already deterministic with 64 transitions.
Incomplete random walk after 10007 steps, including 2 resets, run finished after 80 ms. (steps per millisecond=125 ) properties (out of 58) seen :32
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 18 ms. (steps per millisecond=55 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 27 ms. (steps per millisecond=37 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 18 ms. (steps per millisecond=55 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 16 ms. (steps per millisecond=62 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 15 ms. (steps per millisecond=66 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 20 ms. (steps per millisecond=50 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1000 steps, including 2 resets, run finished after 25 ms. (steps per millisecond=40 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 10 ms. (steps per millisecond=100 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 19 ms. (steps per millisecond=52 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 24 ms. (steps per millisecond=41 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=200 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=166 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 26) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 26) seen :1
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 8 ms. (steps per millisecond=125 ) properties (out of 25) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 25) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 25) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 25) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=200 ) properties (out of 25) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=200 ) properties (out of 25) seen :3
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 5 ms. (steps per millisecond=200 ) properties (out of 22) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 22) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 7 ms. (steps per millisecond=143 ) properties (out of 22) seen :0
Incomplete Best-First random walk after 1001 steps, including 2 resets, run finished after 9 ms. (steps per millisecond=111 ) properties (out of 22) seen :0
Running SMT prover for 22 properties.
[2023-03-13 05:35:38] [INFO ] Invariant cache hit.
[2023-03-13 05:35:38] [INFO ] [Real]Absence check using 7 positive place invariants in 2 ms returned sat
[2023-03-13 05:35:38] [INFO ] After 85ms SMT Verify possible using all constraints in real domain returned unsat :0 sat :0 real:22
[2023-03-13 05:35:38] [INFO ] [Nat]Absence check using 7 positive place invariants in 2 ms returned sat
[2023-03-13 05:35:38] [INFO ] After 90ms SMT Verify possible using state equation in natural domain returned unsat :0 sat :22
[2023-03-13 05:35:38] [INFO ] After 193ms SMT Verify possible using trap constraints in natural domain returned unsat :0 sat :22
Attempting to minimize the solution found.
Minimization took 131 ms.
[2023-03-13 05:35:38] [INFO ] After 408ms SMT Verify possible using all constraints in natural domain returned unsat :0 sat :22
Parikh walk visited 21 properties in 417 ms.
Support contains 3 out of 38 places. Attempting structural reductions.
Starting structural reductions in REACHABILITY mode, iteration 0 : 38/38 places, 64/64 transitions.
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 0 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 3 place count 36 transition count 63
Drop transitions removed 1 transitions
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 0 with 1 rules applied. Total rules applied 4 place count 36 transition count 62
Performed 10 Post agglomeration using F-continuation condition.Transition count delta: 10
Deduced a syphon composed of 10 places in 0 ms
Reduce places removed 10 places and 0 transitions.
Iterating global reduction 1 with 20 rules applied. Total rules applied 24 place count 26 transition count 52
Drop transitions removed 9 transitions
Reduce isomorphic transitions removed 9 transitions.
Graph (complete) has 78 edges and 26 vertex of which 25 are kept as prefixes of interest. Removing 1 places using SCC suffix rule.0 ms
Discarding 1 places :
Also discarding 0 output transitions
Iterating post reduction 1 with 10 rules applied. Total rules applied 34 place count 25 transition count 43
Drop transitions removed 1 transitions
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 2 with 1 rules applied. Total rules applied 35 place count 25 transition count 42
Free-agglomeration rule applied 5 times.
Iterating global reduction 3 with 5 rules applied. Total rules applied 40 place count 25 transition count 37
Reduce places removed 5 places and 0 transitions.
Drop transitions removed 3 transitions
Reduce isomorphic transitions removed 3 transitions.
Iterating post reduction 3 with 8 rules applied. Total rules applied 48 place count 20 transition count 34
Free-agglomeration rule (complex) applied 2 times.
Iterating global reduction 4 with 2 rules applied. Total rules applied 50 place count 20 transition count 32
Reduce places removed 2 places and 0 transitions.
Drop transitions removed 2 transitions
Reduce isomorphic transitions removed 2 transitions.
Iterating post reduction 4 with 4 rules applied. Total rules applied 54 place count 18 transition count 30
Applied a total of 54 rules in 22 ms. Remains 18 /38 variables (removed 20) and now considering 30/64 (removed 34) transitions.
Finished structural reductions in REACHABILITY mode , in 1 iterations and 22 ms. Remains : 18/38 places, 30/64 transitions.
Incomplete random walk after 10029 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=1671 ) properties (out of 1) seen :0
Incomplete Best-First random walk after 10001 steps, including 2 resets, run finished after 9 ms. (steps per millisecond=1111 ) properties (out of 1) seen :0
Finished probabilistic random walk after 1124608 steps, run visited all 1 properties in 1883 ms. (steps per millisecond=597 )
Probabilistic random walk after 1124608 steps, saw 764315 distinct states, run finished after 1884 ms. (steps per millisecond=596 ) properties seen :1
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 6 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 6 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Computed a total of 0 stabilizing places and 0 stable transitions
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 0 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 3 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 3 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 4 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 1 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 0 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 0 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 0 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 0 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 0 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 3 place count 36 transition count 63
Applied a total of 3 rules in 3 ms. Remains 36 /38 variables (removed 2) and now considering 63/64 (removed 1) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 3 ms. Remains : 36/38 places, 63/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 63 transitions.
Incomplete random walk after 10045 steps, including 2 resets, run finished after 6 ms. (steps per millisecond=1674 ) properties (out of 1) seen :0
Finished Best-First random walk after 1201 steps, including 0 resets, run visited all 1 properties in 2 ms. (steps per millisecond=600 )
FORMULA Angiogenesis-PT-50-CTLFireability-05 TRUE TECHNIQUES TOPOLOGICAL BESTFIRST_WALK
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 1 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 0 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 0 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 0 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 1 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 0 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 3 place count 36 transition count 63
Partial Post-agglomeration rule applied 4 times.
Drop transitions removed 4 transitions
Iterating global reduction 0 with 4 rules applied. Total rules applied 7 place count 36 transition count 63
Applied a total of 7 rules in 4 ms. Remains 36 /38 variables (removed 2) and now considering 63/64 (removed 1) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 4 ms. Remains : 36/38 places, 63/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 63 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 0 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 0 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 1 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 12 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 1 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in LTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Applied a total of 0 rules in 1 ms. Remains 38 /38 variables (removed 0) and now considering 64/64 (removed 0) transitions.
Finished structural reductions in LTL mode , in 1 iterations and 1 ms. Remains : 38/38 places, 64/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 9 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 64 transitions.
Starting structural reductions in SI_CTL mode, iteration 0 : 38/38 places, 64/64 transitions.
Performed 1 Pre agglomeration using Quasi-Persistent + Divergent Free condition..
Pre-agglomeration after 0 with 1 Pre rules applied. Total rules applied 0 place count 38 transition count 63
Deduced a syphon composed of 1 places in 0 ms
Reduce places removed 2 places and 0 transitions.
Iterating global reduction 0 with 3 rules applied. Total rules applied 3 place count 36 transition count 63
Partial Post-agglomeration rule applied 2 times.
Drop transitions removed 2 transitions
Iterating global reduction 0 with 2 rules applied. Total rules applied 5 place count 36 transition count 63
Applied a total of 5 rules in 5 ms. Remains 36 /38 variables (removed 2) and now considering 63/64 (removed 1) transitions.
Finished structural reductions in SI_CTL mode , in 1 iterations and 5 ms. Remains : 36/38 places, 63/64 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 2 ms
[2023-03-13 05:35:41] [INFO ] Input system was already deterministic with 63 transitions.
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 4 ms
[2023-03-13 05:35:41] [INFO ] Flatten gal took : 3 ms
[2023-03-13 05:35:41] [INFO ] Export to MCC of 15 properties in file /home/mcc/execution/CTLFireability.sr.xml took 2 ms.
[2023-03-13 05:35:41] [INFO ] Export to PNML in file /home/mcc/execution/model.sr.pnml of net with 38 places, 64 transitions and 184 arcs took 1 ms.
Total runtime 4762 ms.
There are residual formulas that ITS could not solve within timeout
timeout --kill-after=10s --signal=SIGINT 1m for testing only

Marcie built on Linux at 2019-11-18.
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: /home/mcc/BenchKit/bin//../reducer/bin//../../marcie/bin/marcie --net-file=model.pnml --mcc-file=CTLFireability.xml --memory=6 --mcc-mode

parse successfull
net created successfully

Net: Petri
(NrP: 38 NrTr: 64 NrArc: 184)

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec

net check time: 0m 0.000sec

init dd package: 0m 2.948sec

TIME LIMIT: Killed by timeout after 3600 seconds
MemTotal: 16393220 kB
MemFree: 4618944 kB
After kill :
MemTotal: 16393220 kB
MemFree: 16097260 kB

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ export PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ PYTHONPATH=/home/mcc/BenchKit/itstools/pylibs
+ export LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
+ LD_LIBRARY_PATH=/home/mcc/BenchKit/itstools/pylibs:
++ sed s/.jar//
++ perl -pe 's/.*\.//g'
++ ls /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/plugins/fr.lip6.move.gal.application.pnmcc_1.0.0.202303021504.jar
+ VERSION=202303021504
+ echo 'Running Version 202303021504'
+ /home/mcc/BenchKit/bin//../reducer/bin//../../itstools//itstools/its-tools -pnfolder /home/mcc/execution -examination CTLFireability -timeout 360 -rebuildPNML
check for maximal unmarked siphon
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.000sec

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-50"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="marciexred"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-5348"
echo " Executing tool marciexred"
echo " Input is Angiogenesis-PT-50, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r010-oct2-167813598900362"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-50.tgz
mv Angiogenesis-PT-50 execution
cd execution
if [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "UpperBounds" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] || [ "CTLFireability" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "CTLFireability" = "ReachabilityDeadlock" ] || [ "CTLFireability" = "QuasiLiveness" ] || [ "CTLFireability" = "StableMarking" ] || [ "CTLFireability" = "Liveness" ] || [ "CTLFireability" = "OneSafe" ] ; then
echo "FORMULA_NAME CTLFireability"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;